Marinomonas foliarum: JSY38_01730
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Entry
JSY38_01730 CDS
T07165
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
mfoi
Marinomonas foliarum
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mfoi03009
]
JSY38_01730
Enzymes [BR:
mfoi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
JSY38_01730
Ribosome biogenesis [BR:
mfoi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JSY38_01730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
QRV24285
LinkDB
All DBs
Position
complement(354667..355371)
Genome browser
AA seq
234 aa
AA seq
DB search
MRLDKFVCKSTELNRKEAVQSIYSGEVFVNGEVVTNEATQVHENNSVLLNGVELKARDFR
YIMMNKPAGTVCSNIDEVYPSLFNYLEVDKISELHIAGRLDADTTGLVLITDDGRWSFNI
TQPTNDCRKVYRVQLSQAISKDCSQELIAQFKKGLPLQGEASLTRPAELEIIAPKEMRLT
ITEGKFHQVKRMFAAVGNRVVGLHREQIGKVCLDVDAGQWRYLSKNEVESFNNN
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttgataagtttgtttgtaaaagtactgagctgaacagaaaagaagcggttcaa
tctatttattcgggtgaggtttttgttaatggtgaggtcgttacgaacgaggcgactcaa
gtacatgaaaataatagcgtacttttaaatggcgttgagttaaaggcgcgtgattttcgt
tatattatgatgaataagccagcgggtactgtgtgctcgaatattgatgaggtttatccg
tcactgttcaattatctagaggttgataagatttctgaattacatatagcagggcgtttg
gatgctgatacaacgggattggtattgattaccgatgatggccgttggtcatttaatatt
actcaaccaaccaatgattgccgcaaagtctatcgcgttcaattgtctcaagcgatttca
aaagattgtagccaagagcttattgctcagttcaaaaaggggcttccactccaaggtgaa
gcgagtttaactcgtcctgccgagctagagattattgctccaaaagaaatgcgcttaacc
atcacggaaggcaagtttcatcaggtgaagcgcatgtttgcagcagttgggaatcgagta
gtgggattgcaccgagagcaaataggtaaggtttgcttagatgtcgacgccggacaatgg
cgctatttatccaagaatgaagtagagtctttcaataataattaa
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