Marinomonas foliarum: JSY38_04475
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Entry
JSY38_04475 CDS
T07165
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mfoi
Marinomonas foliarum
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfoi03016
]
JSY38_04475
Enzymes [BR:
mfoi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
JSY38_04475
Transfer RNA biogenesis [BR:
mfoi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JSY38_04475
Prokaryotic type
JSY38_04475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
HTH_11
Paramyxo_PNT
Motif
Other DBs
NCBI-ProteinID:
QRV24792
LinkDB
All DBs
Position
complement(961382..962476)
Genome browser
AA seq
364 aa
AA seq
DB search
MNTEWRYAWSKPTVTGDLKTHVQDFYVEEQLGFEPDGKGEFCFVFIEKEGVNTDFLAKRL
AQLAGIAPNKVTYSGVKDRHACTRQWFCLHVLNQEPDLSTIQEAFREPESVRVVAQLRHS
KKLRTGTHLANRFVIRMRGIHGDLDELEARLNLIKLSGVPNYYGPQRFGINGNNLHYGKD
FVLKGRQSRRKLSKTESFWLSAIRSWCFNEALSDQVENGMWMRLCDGDIAQFQHKDEQFR
VKEVGALMHLSVQRGSISPVLPMISAGWEAGTGAQREAAIKSSLSESMDLVDSLIAFDLS
RDSRLARLVPMNMAWELLRESEENTQLIVEFSLPKGCFATSLLREMIDFTDKSAEKYHEN
IDRQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgaatggcgatacgcttggtctaagccgacggttactggggatttgaaaacc
catgtacaggatttttatgttgaagagcaattaggttttgaacctgatggtaaaggggaa
ttttgcttcgtatttattgaaaaggagggagtaaataccgattttcttgctaaacgtttg
gctcagcttgctggtattgcacctaataaagtgacttacagtggtgtaaaagatcgccat
gcttgtacgcgccagtggttctgtttgcatgttttgaatcaagaaccagacttgtcgacg
attcaagaagcgttcagggagcctgaaagtgttcgagtggttgcacagttacgtcattcc
aaaaagcttcgtaccggaacgcatttagcgaatcgttttgtgattcgaatgcgcggtatt
catggtgatctggatgaacttgaagcccgcttgaatctgataaaactaagtggtgtgcct
aattattatggtccgcagcgctttggtataaacggtaataatttgcactatgggaaagac
tttgtcttaaaagggcggcaaagtcgccgcaagctttctaagacagagtctttctggtta
tctgctattcgatcttggtgtttcaatgaagccttaagtgaccaagttgaaaatggtatg
tggatgcgtttgtgtgatggtgatatcgctcagtttcagcacaaagatgagcaattccgc
gtgaaggaagttggtgctttgatgcatttaagtgtgcagcgcggcagtataagccctgtt
ttacctatgattagtgcaggttgggaagcgggtacaggcgcgcagagagaggcagcaatt
aaaagctctttgtcagagagtatggacttagttgattcactcattgcttttgatctttct
agagatagtcggttagctcgtcttgttcctatgaacatggcgtgggaattgctaagagaa
agcgaagagaatacgcaactgattgtggagttttctttaccaaaagggtgttttgcgacc
agtttacttcgcgagatgattgattttacggataagtcagctgagaaatatcatgagaat
attgatcgccaatga
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