Marinomonas foliarum: JSY38_04920
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Entry
JSY38_04920 CDS
T07165
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
mfoi
Marinomonas foliarum
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mfoi03000
]
JSY38_04920
Transcription factors [BR:
mfoi03000
]
Prokaryotic type
Helix-turn-helix
Other families
JSY38_04920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA_16
AAA_2
GAF
HTH_8
AAA
bpMoxR
Torsin
MCM
RACo_linker
Motif
Other DBs
NCBI-ProteinID:
QRV24880
LinkDB
All DBs
Position
complement(1061780..1063330)
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AA seq
516 aa
AA seq
DB search
MNNWLKSAAELVVIRSSTQLLSKFTQVLDAELGCRGVYILTPSADGRFVECCMNSSRQLN
WSVSDFDNPFAHVIHSGKSMALQNSELLYWLSNDGFSDLIGCTDDTVKVVILPMLSKDGQ
LQAILVLKTDSYSNHGMDSDDNFLDLLSVCANHLQLLNDMEAKKRKSQLLSQSLIEVEQG
KLKSHLLDGLANVLIGQSEVMKSLREQVAIAASSRLSVMIQGETGTGKELVSRAVHDLSS
RSKANFVAINCAAIPEHLLESELFGYVKGAFSGADKSKKGLLADADGGTLFLDEIGDMPL
ALQAKLLRVLESHKYRPVGSEKELDSNFRLVVATHLNLKEQVLNNKFRKDLYYRLYQYPI
ALPRLKDRTSDIERLSAHFVEQYNAKHKCSVRGLHYKVLDRLLDYDFPGNVRELKHLVEY
GGAQTQDGEQIELAHIQIKLDNEIGGFAEPELKNRAVVELSGISDLKVAVREYESNIIAS
RLREFDGDRGRTAESLGIPKRTLADKCLKLEISIND
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaataattggcttaagtcggcagctgagttggtggtgattcgtagctctactcaactg
ctgtcgaaattcactcaagtgcttgatgccgaattaggttgcagaggggtttatatttta
acgccttctgccgatggtcgcttcgttgaatgttgtatgaatagcagtcgccaattgaat
tggtcggtttctgattttgataacccatttgcccatgttattcattctggcaaatctatg
gcgctgcagaacagtgaattgctttattggctatcgaatgatggttttagtgatttgatc
ggctgcactgatgacactgtgaaagttgttattttgccaatgctttcaaaagatgggcag
cttcaggctatcttggtgcttaagacggacagctactcgaatcatggcatggacagcgat
gacaattttttagatttgctgtctgtttgtgcaaatcatttacaacttttgaatgatatg
gaagcaaagaaaaggaaatcacagttgctgtcacagtcattgattgaagtggaacaaggc
aagctaaaaagccatctattggatggtcttgctaacgttttaataggccagagcgaggtg
atgaaatcgttacgtgagcaggtggccattgcggcttcctctcgtctttctgtgatgatc
caaggtgagacgggcacaggcaaagagcttgtttcacgtgccgtgcatgatttgtcttct
cgcagtaaagcaaactttgtcgccatcaactgtgccgctattcctgagcatcttctggaa
agcgaactgtttggctacgtcaaaggggctttttctggcgcagataaaagtaaaaaaggg
ctattagctgatgctgatggtggcaccttatttcttgatgaaattggtgacatgccgcta
gcactgcaagctaaattgctaagagtattggagtcccataaatatcgtccagtaggctct
gaaaaagagctggattctaattttagattggtcgttgctacccatttaaatttaaaagag
caggtattgaacaataaattccgcaaggatttgtactaccgcttatatcaatacccgatc
gctttgcctcgattaaaagatcgaacatcagatatagagagactcagtgctcattttgtt
gagcaatataatgcaaaacataaatgcagcgtacgaggccttcattacaaagtattagac
cgcttactggattacgacttccccggaaatgttcgtgaattgaaacacctcgttgaatat
ggtggtgctcagacccaagacggcgagcagatagagctcgctcatattcaaataaaatta
gataacgaaattggcggctttgctgagcctgaacttaaaaatcgagctgttgttgagttg
tcgggtattagtgatcttaaagtcgcggtgagagagtatgagtcaaacattattgcttct
aggttgcgtgagtttgatggtgatagaggaaggacagctgagagtttgggtattcccaaa
agaaccttggctgataagtgtttgaaattggagatatccattaatgattag
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