Marinomonas foliarum: JSY38_05135
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Entry
JSY38_05135 CDS
T07165
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mfoi
Marinomonas foliarum
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfoi03400
]
JSY38_05135 (phrB)
Enzymes [BR:
mfoi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JSY38_05135 (phrB)
DNA repair and recombination proteins [BR:
mfoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JSY38_05135 (phrB)
Prokaryotic type
JSY38_05135 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QRV24923
UniProt:
A0ABX7ITM4
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All DBs
Position
1114826..1116238
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AA seq
470 aa
AA seq
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MKVEHLVWLRNDLRHLDNPALHFAAMEARSQNTKLAVLITPTPAQWAEHHESNAKTGLRA
GLIKSLAKALAPLGIPVHFLEVNNFNQLPDAITQFCLRHHIKHLWFNRDMPIHEQQRDKA
VCEQLAQHQIDSHIQAADIIVPQDVLSQQGTPFKVFTPFFNRWVAMLGLQDITPLESPEP
QAAPLPEPDIEFTWEKPFRKDLWPADQDTAKQKLWQFCHHKERHYQAGRDYPIEPATSTL
SPYLALGALGPRQCLEAIFYTCNQEEKRWQDSIWLKELAWRDFYRQLMMHFPFLSKHQPF
KMETNALIWRSNKEEFQAWCEGKTGFPIVDAAMRQLNQTGWMHNRLRMVTASFFTKLMFA
DWRKGEAYFMSKLIDGEFAANNGGWQWSASTGCDAAPYFRVFNPTRQSQTYDKNGDFIRR
FVPELASLDAKSIHDPKPDQRKQCNYPDPIIDYKPARLHAIEAFDALKSR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgaacatctagtgtggttgcgcaatgatttacgtcacttggataatccagca
cttcattttgccgccatggaagctcgctcacaaaatacaaagcttgccgtacttattacg
ccgacaccagcacagtgggcagaacatcatgagtcgaatgcaaagacgggattacgcgct
gggttaatcaaaagcctagcaaaagcactggcacctcttggtattcccgtacattttctt
gaggtaaataacttcaatcaactgcctgatgctattacccaattttgcctcaggcatcac
ataaaacatctttggtttaatcgtgatatgccaattcacgagcaacaacgtgataaagct
gtatgtgaacaactggctcaacaccagattgactctcatattcaggccgctgacattatt
gttccgcaggatgtactgagccaacaaggaacgccattcaaggtgttcacaccctttttt
aaccgatgggtggcaatgttaggtctacaagatataacccctcttgagtctcccgaacct
caggcggccccattaccagaacccgatatagagttcacatgggagaagccttttagaaaa
gatttatggcctgccgatcaagacactgccaaacaaaagctttggcaattttgtcaccat
aaagagcgccactaccaagcaggaagagattatccaattgagcccgccaccagcacttta
tcaccttatctagcactaggcgctttggggccaagacaatgcttggaagccatcttttat
acctgtaaccaagaagaaaaacgctggcaggacagcatttggttaaaagagctcgcatgg
cgagacttttatcgtcaattaatgatgcactttccttttctgtctaaacaccaaccgttc
aaaatggaaacaaacgccttaatttggcgaagtaataaagaagaattccaagcatggtgt
gaaggtaagacaggttttcccattgtggatgcggccatgcggcaactgaaccagactggc
tggatgcacaatcgactaagaatggtgacagctagcttcttcaccaaacttatgtttgct
gactggcgtaaaggcgaagcatattttatgagtaaactaattgatggtgagttcgcagca
aacaatggtggatggcaatggagtgcatcgacaggctgtgatgccgcgccctattttcga
gttttcaatcccaccagacaatctcaaacttatgacaaaaacggtgactttatccgtcgc
tttgttccagaacttgcaagcttggatgctaagtctatccatgatccaaaacctgaccaa
agaaagcagtgtaattatccagatcccattatcgattataagccagctaggttgcatgcc
attgaagcatttgacgcgctaaaaagcagataa
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