Marinomonas foliarum: JSY38_05620
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Entry
JSY38_05620 CDS
T07165
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mfoi
Marinomonas foliarum
Pathway
mfoi00300
Lysine biosynthesis
mfoi00470
D-Amino acid metabolism
mfoi01100
Metabolic pathways
mfoi01110
Biosynthesis of secondary metabolites
mfoi01120
Microbial metabolism in diverse environments
mfoi01230
Biosynthesis of amino acids
Module
mfoi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JSY38_05620 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JSY38_05620 (dapF)
Enzymes [BR:
mfoi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
JSY38_05620 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QRV25008
UniProt:
A0ABX7ITD8
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All DBs
Position
complement(1218510..1219340)
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AA seq
276 aa
AA seq
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MLLKFTKMHGLGNDFVVVDAVSRKVFFNKQQIEKLSDRNWGIGFDQLLVVEPPMNPDMDF
RYRIYNSDGSEVEHCGNGARCFAKFVLDRELTNKRIINVETKRGAIQLRVLDGGLVTVDM
GEPSFAPEDLPFTAGPCDGLYSVMAGDTEYFITPVSVGNPHAVIKVDQLIDSEVAKTGPL
IECHERFPRKVNVGFMQVISSDEINLRVFERGVGETQACGTGACAAVVAGIKQGWLSPKV
TAHLRGGDLHIEWQGEGLPILMTGPAEKVFEGQIYL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgttgttaaaatttaccaaaatgcatggtctaggtaatgactttgtcgtcgttgatgcc
gtgtctcgtaaagtgttttttaataaacaacagatcgagaaattgagtgaccgtaattgg
gggatcggttttgaccagctattagtggtcgagccaccgatgaacccagatatggatttt
cgttaccgtatttataactctgatggcagtgaagtggagcattgtggaaacggtgctcgt
tgctttgctaagtttgttttagaccgtgaattaaccaataaacgtatcattaatgtcgag
acaaagcgtggcgctattcagttacgtgtgctggatggtggtcttgttacggtagatatg
ggcgagccaagctttgcgccagaagatttgccatttactgcggggccttgtgatgggctt
tatagtgtcatggctggtgatacggaatatttcattacaccggtctctgttggtaatcct
cacgctgtgatcaaagttgatcagctcattgatagtgaagtagcaaagactgggccctta
atcgagtgccatgaacgctttcctcgtaaagtaaatgttggttttatgcaggttattagt
tctgatgaaatcaacttacgtgtatttgaacgtggcgtgggtgaaactcaagcctgcggc
actggtgcttgtgctgctgtagttgctggaattaagcaaggttggttgtcacctaaagtc
actgcacatctacgtggtggtgatttgcatattgaatggcagggggaggggttgcctatt
ctgatgacaggccctgctgagaaagtattcgaaggtcaaatttacctatag
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