Marinomonas foliarum: JSY38_06045
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Entry
JSY38_06045 CDS
T07165
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mfoi
Marinomonas foliarum
Pathway
mfoi03410
Base excision repair
mfoi03430
Mismatch repair
mfoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JSY38_06045 (recJ)
03430 Mismatch repair
JSY38_06045 (recJ)
03440 Homologous recombination
JSY38_06045 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfoi03400
]
JSY38_06045 (recJ)
DNA repair and recombination proteins [BR:
mfoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JSY38_06045 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JSY38_06045 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JSY38_06045 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ChlI
Motif
Other DBs
NCBI-ProteinID:
QRV25078
UniProt:
A0ABX7IRV2
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All DBs
Position
complement(1305602..1307326)
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AA seq
574 aa
AA seq
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MRIERRSIPAIAEDLPEDMPLSLRRIFMARGVSTSLELDYRLPNLLRPSSLFDLTIAAKI
LADAIVAGQKILIVGDFDADGATSTSLGILALEAMGAIAPEYLVPNRFEFGYGLTPEIVE
VAQKSSPNVLVTVDNGIASIDGVQAAKAYGMKVVVTDHHLPGDTLPNADAIVNPNHPDCG
FPSKNLAGVGVIFYVMSALRAELNSRNWFADQHIPEPKMADYLDLVALGTVADVVPLDAN
NRILVQQGIKRIQAGLARPGILALLEVGRRDYTQLKASDLGFVVGPRLNAAGRLDDMSVG
IECLLAVHPHQARNYAQQLDQFNRERKAIESDMKEQAELVLESLLDEEQEMPNGMCFYDA
DWHQGVIGILASRMKDKCHRPVIAFARVGEDELKGSARSIPGVHIRDALDLLAKRYPQLL
SKFGGHAMAAGMSIKESHYEAFQLAFDAIITEWVTPEQLEATLLTDGQLAPEDFSLSFAE
QVRLSGPWGQMFPEPCFDGVFDILQQRIVGEKHLKLMVREPSSGLLLDGISFFVDLDQWP
NDKATQARLVYKLDVNEFRGQRNLQLLVDYLEPA
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatagagcgtcgatccattccagccattgctgaagacttgccagaagacatgcct
ttgagtttacgtcgtatttttatggcgaggggggtgagcaccagcctagagcttgattac
cgtctacctaatttactaaggcctagctctttatttgatctaacaatcgcggcaaagatt
ttggctgatgcaattgttgcaggtcagaagattctgattgttggcgattttgacgcggat
ggtgcgactagtaccagtcttgggattcttgctttagaggcaatgggagcgattgctcca
gaatacttggtgccaaatcgctttgagtttggttatggtctgacgcctgaaatagttgag
gtcgcacaaaaaagttctcccaatgtattggtgacagttgataatggtattgccagtatt
gatggtgttcaagctgccaaagcttatggcatgaaagtcgtggttactgaccaccatttg
cccggtgatacgctgccaaatgcggatgctattgtgaacccaaatcatccagattgtggt
tttccaagtaaaaacttagctggcgttggggtgattttctacgtgatgtcggcattaaga
gccgaattaaatagtcgtaactggtttgctgaccagcatattccagaaccgaaaatggcg
gactatttggatttggttgcgcttggtacggtagctgatgtggtgcctttggatgccaat
aatcgtattttggttcagcaaggcatcaagcgaattcaggccggtttggcgcgtccgggt
attcttgctttattagaagtagggcgtcgtgattatactcaattgaaagcatcagacttg
ggctttgttgttgggccacgattaaacgcggctgggcgacttgatgatatgtcggttggt
attgaatgtctgttggctgtacacccacatcaagcacgtaattatgcacagcagttagat
cagtttaatcgcgagcgcaaagccattgaatcggatatgaaagagcaggcagaattagtg
cttgagtctttattggatgaagagcaggaaatgccaaatggcatgtgcttttatgatgcg
gactggcaccaaggtgtgattggtattttggcctcgcggatgaaagataaatgtcatcgt
ccggtgattgcttttgctcgtgttggtgaagatgagttaaaaggttcagcgcgctcgatt
ccaggtgtacatattcgtgatgcattggatttattggccaagcgttatccacagttgctt
agcaaatttggtggtcatgctatggcggcgggcatgtcgattaaagaatcgcattatgag
gcttttcaattggcattcgatgccattattactgaatgggtgacgccggaacagctagaa
gcaaccttgttgactgatggccagctggcgccagaagattttagtctgagttttgctgag
caagttcgtttatctggtccgtgggggcaaatgttcccagagccatgttttgatggcgtg
tttgatattctgcagcagcgcatcgtgggtgaaaagcatttgaagcttatggtgcgcgag
ccgagcagtggactattgctggatgggattagcttttttgtcgatttagaccaatggccc
aatgataaagcgactcaagcacgcttagtttataagctggatgtgaatgagtttcgaggt
cagcgtaatttgcagctattagtggactatttagagcctgcataa
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