Marinomonas foliarum: JSY38_06330
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Entry
JSY38_06330 CDS
T07165
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
mfoi
Marinomonas foliarum
Pathway
mfoi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JSY38_06330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfoi03021
]
JSY38_06330
Transcription machinery [BR:
mfoi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JSY38_06330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_11
HTH_23
GerE
WHD_NWD1
HTH_24
YgfK_N
HTH_VMAP-M9
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QRV25124
UniProt:
A0A368ZSR1
LinkDB
All DBs
Position
complement(1360769..1361287)
Genome browser
AA seq
172 aa
AA seq
DB search
MNPERQTSQQVGELYAEHSSWLNGWIRNRLGCHELAADIAQDTFVRLLKKPKYFSNMGEA
RAFLTTIAKGLYIDHWRRKQIEQAWLESLAHCEEEFAASAEHSAAMIELLCELDAMIAKL
PKKVANTLILSQLHGLTYREIAERLSVSERMVKRYMAQAMLQCLLFKSDRSL
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgaacgtcaaacatcccaacaggttggtgagctttatgctgagcatagctca
tggctaaatgggtggattcgtaatcgcttaggttgccatgagctagcggcagatattgca
caagacacttttgtgcgattgctaaaaaagccgaaatacttctcgaacatgggagaagct
cgagcttttttaaccaccatagcgaaaggtttgtatattgaccactggcgtcgcaaacag
atcgagcaagcttggttggaatccttggcgcattgtgaagaagaatttgctgcgtcagct
gagcattcggccgctatgattgagttgctttgcgaactagacgccatgatcgctaagtta
cctaaaaaagtggcgaatacactcattttgtctcaacttcatggtttgacttaccgcgaa
attgccgaacgtttgtctgtctctgaacgtatggtgaagcgctatatggcgcaggccatg
ttgcagtgtcttttgtttaaatctgatcggtctctttag
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integrated database retrieval system
