Marinomonas foliarum: JSY38_06430
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Entry
JSY38_06430 CDS
T07165
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
mfoi
Marinomonas foliarum
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfoi03400
]
JSY38_06430 (radA)
DNA repair and recombination proteins [BR:
mfoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JSY38_06430 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
RecA
AAA_22
SLFN-g3_helicase
ABC_tran
GvpD_P-loop
nSTAND3
AAA_16
AAA_24
AAA
AAA_14
AAA_30
NTPase_1
AAA_29
cobW
Zeta_toxin
DUF6549
Rad51
AAA_5
AAA_33
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QRV25143
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All DBs
Position
1381194..1382582
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AA seq
462 aa
AA seq
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MAKAKTAFVCNECGADYAKWQGQCQACSAWNSLSEIRLTSGKTSARVSASQDPRYQGYAG
AVTGIQNLSDVDLGDVPRFSSGANEFDRVLGGGLVPGGVVLIGGHPGAGKSTLLLQTMCW
LAQQQSALYVTGEESLQQVAMRAQRLGLPTQNLKMLSETNVEAILTIAQQVKPKVMVIDS
IQVMHLDGVESAPGSVSQVRESAAVLTRFAKQTQTAVLLVGHVTKDGSLAGPKVLEHMVD
CSVLLEGSEDSRFRTLRGMKNRFGAINELGVFAMLENGLKEVKNPSSIFLNRSNHPAAGS
LVMVVWEGTRPLLVELQALVDDSALGNPRRVTVGFDHNRLAMLLAVLHKHGGLLTSDQDV
YLNVVGGVKVLETSADLAAIAAVVSSFRDKILPHDLVVLGEVGLSGEIRPVPSGQERISE
AAKHGFTRAVVPKANCPKKPIEGMKVIGVDRLSEALDAIFEN
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcaaaaaccgcttttgtatgcaatgaatgcggagccgactacgcaaaatgg
caaggacaatgccaagcctgcagcgcgtggaattccctatccgaaattcgccttacctct
ggtaagacctctgctcgcgtttctgctagccaagatccacgttatcaaggttacgctggt
gccgtgacaggtattcagaatttatctgacgttgatttaggagatgtacctcgctttagc
tccggagcaaatgaattcgaccgagtattaggcggggggttagtccccgggggtgtcgta
ctgattggcggacatccaggtgcaggtaaaagtactttactactgcaaaccatgtgttgg
ctggctcagcaacaaagcgctttgtacgtgacaggggaggaatcccttcagcaagtcgct
atgcgagcacaacgccttggtttacctacacaaaacctaaaaatgctgtctgaaaccaat
gtggaagcgattttaaccatcgctcagcaagtcaaacccaaagtcatggtgatcgattcg
atccaagtcatgcatttggatggcgtagaatccgctcccggcagtgtgtcacaagttcga
gaaagcgctgcagttttaacgcgcttcgccaaacaaacccaaacagcggttttattggtc
ggtcacgtcaccaaagacggctctttggcaggtcctaaagtacttgaacacatggtggat
tgctctgttctgttggaaggctcagaagactcgcgctttcgtactcttcgtggcatgaaa
aaccgctttggtgccatcaatgagctaggcgtttttgccatgctagaaaatggtttaaaa
gaagtaaaaaaccctagttctatattcttgaaccgcagcaatcatccagcggcaggcagt
cttgtcatggtggtgtgggaaggcacacgccccttgctggtcgaacttcaagccttggtc
gatgattccgccctaggcaacccaagacgcgttaccgtcggctttgatcataatcgccta
gccatgttattagcggtactccacaaacacggtggcttgcttacatccgaccaagacgtc
tacttaaacgtagtaggcggtgtcaaagtattggaaaccagtgccgatctggcggctatc
gcagcagttgtctccagcttccgcgataaaatcttgccccatgatttggtcgtactgggt
gaagtgggtttgtcaggagaaattcgacctgtgccatctggccaagaacgcattagtgaa
gccgccaaacatggttttactagagcagtggtaccaaaagctaattgcccgaaaaaaccg
attgagggcatgaaagtgattggcgtggatcgtttatcggaagcgctagacgcgatattt
gaaaactag
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