Marinomonas foliarum: JSY38_08555
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Entry
JSY38_08555 CDS
T07165
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mfoi
Marinomonas foliarum
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfoi03021
]
JSY38_08555 (rpoH)
Transcription machinery [BR:
mfoi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JSY38_08555 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
QRV25540
LinkDB
All DBs
Position
complement(1839734..1840600)
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AA seq
288 aa
AA seq
DB search
MGKALQPTDMMIPGQNLESYMQAVGRIPILTADEEKALAERLYYKEDLEAARTLVMSHLR
FVVHIAKSYSGYGLAQGDLIQEGNVGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEFILK
NWRIVKVATTKAQRKMFFNLRSAKKSLSWFSNSEVESVASDLGVTPEVVRQMEGRLSASD
MAFDASADDDDDSAFQAPSQYLEDHRSDPATLLENGNWEEDSNQRLEVAMSDLDERSRNI
LVQRWLSDAKSTLHELADEYGVSAERIRQLEKNAMKKIRLAMGDGQFD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctccaacctacagacatgatgattccaggtcaaaaccttgaatcttat
atgcaagcagtcggacgaattccgattcttacggcagacgaagaaaaagcgttagccgag
cgtctttattataaagaagatcttgaagcggcacgtacattggttatgtcgcacttgaga
tttgttgtgcatattgcaaaaagttactcaggatacggtttagcccaaggcgaccttatt
caagaaggcaatgttggcctgatgaaagcagtaaaacgatttaaccctgaagtgggtgtg
cgtcttgtgtcttttgctgtgcactggatcaaagctgaaattcatgagtttattctgaaa
aactggcgtattgtgaaagtcgctacaacgaaagcgcaacgtaagatgttttttaatctg
cgcagtgcgaaaaagagcctgtcttggttcagtaactccgaagttgagtcagttgctagt
gatcttggcgtcacgccggaagtggttcgccaaatggaagggcgtttaagcgcgtctgat
atggcatttgatgcttctgctgatgacgatgatgacagtgctttccaagcgccttctcag
tatttagaggatcatcgatccgaccctgcaaccttgcttgaaaacggtaactgggaagaa
gactctaaccagcgtttagaagttgcaatgtcagaccttgatgagcgtagccgaaatatt
ctagtacagcgttggttatctgatgcgaaatcgacattgcatgaactggcagatgaatac
ggtgtgtctgcagagcgtattcgacagctcgaaaaaaatgcgatgaagaaaatacgtctt
gctatgggtgatggtcaatttgactga
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