Marinomonas foliarum: JSY38_10320
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Entry
JSY38_10320 CDS
T07165
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mfoi
Marinomonas foliarum
Pathway
mfoi03030
DNA replication
mfoi03410
Base excision repair
mfoi03420
Nucleotide excision repair
mfoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JSY38_10320 (polA)
03410 Base excision repair
JSY38_10320 (polA)
03420 Nucleotide excision repair
JSY38_10320 (polA)
03440 Homologous recombination
JSY38_10320 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfoi03032
]
JSY38_10320 (polA)
03400 DNA repair and recombination proteins [BR:
mfoi03400
]
JSY38_10320 (polA)
Enzymes [BR:
mfoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JSY38_10320 (polA)
DNA replication proteins [BR:
mfoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JSY38_10320 (polA)
DNA repair and recombination proteins [BR:
mfoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JSY38_10320 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JSY38_10320 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
NYN_YacP
HHH
Motif
Other DBs
NCBI-ProteinID:
QRV25747
LinkDB
All DBs
Position
complement(2246636..2249386)
Genome browser
AA seq
916 aa
AA seq
DB search
MILVDGSSYLYRAFHAIPPMHTSDGQPTNATRGVISMIRSLIKTYPDSPMVIIFDAKGKT
FRDEIYSEYKAHRPPMPDDLRPQIEPIHRVVEAMGLPLVIIDNVEADDVIGTIAKQVGEQ
GRDVVVSTGDKDMAQLVTDKVTLVNTMNNTVMDIQGVKDKFGIPPELIIDYLALMGDKVD
NIPGVPGVGEKTALALLQGLGSIKDIYTRLDEIADLGFRGSKTMKQKMEDNKEMAELSYT
LATIKCDVELPFEPQELKNGEADKEKLREWFTKLEFKTWLSDLDKAPSVETASDTVGNAS
SEQNGQVETPVKSNIEANYDTVLDKASFNKWLEKIQAAELVAFDTETTSLNYMAAELVGL
SFSVEVGEAAYVPVAHDYEGAPEQLDRTWVLEQLKPWLEDDSKAKVGQHLKYDANVLNNY
DITLRGIAYDTMLESYVYNSVSSRHDMDTLASKFLGHTNVSFEDIAGKGAKQKTFNQIDL
EVAAFYAAEDADITLRLHEAIWPKIETTPELVSIFKDIECPLIPVLAKMEQTGALIDPEL
LHLQSTEIAGKLQELEIKAHEEAGESFNLSSPKQLQVILFEKQGLPVIKKTPKGQPSTAE
PILQELAQDYELPRLIMEHRSLSKLKSTYTDKLPEMIQKTGRIHTSYHQAITATGRLSST
DPNLQNIPIRSAEGRRIRQAFIAPKGYKLVAADYSQVELRIMAHLSQDPGLLDAFTKDAD
VHKATAAEVFEVSLEEVTTEQRRRAKAINFGLIYGMSAFGLAKQLGIGRPEAGKYIKRYF
ERYPGVQQYMENTREGAKEKGYVETIYGRRLYLPDIKAKNAMMRQAAERTAINAPMQGSA
ADIIKRAMIKMHDWLADTDLDVKMIMQVHDELIFEVAEKDLEKAQAKIVDIMQNSSKIDV
PLLVEAGVGDNWDEAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgatcttggtagacggctcgtcttacctttaccgagcattccacgcgattccacctatg
cacaccagcgatggccaaccgaccaacgccacgcgcggtgtgatcagcatgatccgcagc
ctaatcaaaacctacccagattcccctatggtcatcatcttcgacgctaagggtaaaacc
ttccgcgacgagatctacagcgaatacaaagcgcaccgtccacccatgccagacgaccta
cgcccgcaaatcgaaccgattcaccgcgtggtggaagccatgggcttgccgctggtgatc
atagataacgtagaagccgacgacgtaatcggcaccatcgccaaacaagtgggcgaacaa
ggccgtgacgtggtggtttctacgggcgataaagacatggctcagttggttaccgacaaa
gtcacccttgtgaacaccatgaacaacaccgtcatggacatccaaggcgtgaaagacaag
ttcggcattccgcctgaacttattatcgattacctcgcattgatgggtgacaaagtcgat
aacatcccaggcgtacccggtgtaggcgaaaaaaccgcccttgccttgttgcaaggattg
ggcagcatcaaagacatctatacgcgcttagacgaaatcgctgacttgggcttccgtggt
tctaaaaccatgaagcaaaaaatggaagacaacaaagagatggccgagctgtcttatacc
ttggcgaccatcaaatgcgacgtagaactgcctttcgaaccacaagaattgaaaaacggc
gaagccgacaaagaaaagctgcgtgaatggttcaccaagctggaattcaaaacttggttg
tctgacctagacaaagcgccaagcgtagaaaccgccagcgataccgttggtaatgcttcc
tcagagcaaaatggccaagtggaaacaccggttaaatccaacatcgaagccaactacgac
accgtcttagacaaagcaagcttcaacaaatggctagagaaaatccaagccgctgaactg
gttgccttcgatacagaaaccacctcgctgaactacatggccgccgaactggttggcttg
tccttctcggtagaagtgggcgaagcggcttacgttccagtggctcacgattacgaaggc
gcgccagaacagctagatcgcacttgggtgttagaacagctgaaaccttggctcgaagac
gacagcaaagccaaagtcggccaacacctaaaatacgacgccaacgtgctcaacaactac
gacatcaccttgcgcggcattgcctacgacaccatgttggaatcttacgtgtacaactcc
gtaagttcacgtcacgacatggacaccttggcgagcaaattccttggtcacaccaacgtg
agcttcgaagacattgccggcaaaggcgcgaagcaaaaaacctttaaccaaatcgactta
gaagtggctgccttttacgcagctgaagacgccgacatcaccttgcgtttgcatgaagcc
atttggccgaaaatcgaaaccacaccagaattggtcagcatctttaaagacattgaatgc
ccactgattccggtattggcgaaaatggaacaaaccggagccttgatcgacccagaactc
ttgcacctgcaaagcactgaaatcgctggaaaactgcaagagctagaaatcaaagcccac
gaagaagcgggcgaaagcttcaacctaagctcgccgaaacaactgcaagttatcttgttc
gaaaaacaaggtttgccggtgatcaaaaaaacacccaaaggccagccatctactgccgaa
ccaattttgcaagaactggcgcaagactacgaactgcctcgcttgatcatggaacaccgc
agcctgtctaagttgaaatccacttacacagacaaactgccagagatgatccaaaagacg
ggccgcattcatacctcgtaccaccaagccattaccgcgacaggccgtttgtcgtcgacc
gatccgaacttgcagaacatcccgattcgttctgctgaaggtcgccgcattcgccaagct
tttatcgcgcctaaaggctacaagttagtggcggccgactactcgcaagtcgaattacgc
atcatggcgcacctgtcccaagatccgggcttattagacgctttcacaaaagacgccgac
gtgcacaaagccaccgcagcggaagtcttcgaagtgagcttagaagaagtgaccacagaa
caacgtcgccgcgccaaagccataaacttcggtttgatctacggcatgtctgcctttggt
ctagcgaaacagcttggcattggtcgcccagaagcaggaaaatacatcaaacgctacttc
gaacgttacccaggcgtgcaacaatacatggaaaacacccgcgaaggcgcgaaagaaaaa
ggctacgtggaaaccatctacggccgccgcttgtacctgccagacatcaaagcgaaaaac
gccatgatgcgccaagccgccgaacgcaccgcgatcaacgcccccatgcaaggctccgcc
gccgacatcatcaaacgcgccatgatcaaaatgcacgactggctagcggacaccgaccta
gacgtaaaaatgatcatgcaagtacacgatgaactcatcttcgaagtcgcagaaaaagac
ctagaaaaagcccaagcaaaaatcgtcgacatcatgcaaaacagcagcaaaatcgacgtg
cctttacttgtggaagcgggagttggagacaactgggacgaggcgcattga
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