Marinomonas foliarum: JSY38_11445
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Entry
JSY38_11445 CDS
T07165
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mfoi
Marinomonas foliarum
Pathway
mfoi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JSY38_11445 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfoi03400
]
JSY38_11445 (mutM)
Enzymes [BR:
mfoi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JSY38_11445 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JSY38_11445 (mutM)
DNA repair and recombination proteins [BR:
mfoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JSY38_11445 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
QRV22691
LinkDB
All DBs
Position
2475252..2476070
Genome browser
AA seq
272 aa
AA seq
DB search
MPELPEVETTLRGIEPKLVGRTLARVDIRQPKLRWLITPELSSEMVGEEITHLSRRGKYI
GIHTSKGTLVVHLGMSGSLYFVPAETPPLFHDHVDFCFADDDVWLRYTDPRRFGAILWTT
KDWNEHELIAHLGPEPLSELFNADMLYARAKGRKVPIKTFIMDSKIVVGVGNIYANEALF
KAGIRPDRLAGKISKVRLARLVECIKVVLAAAIKQGGTTLKDFVGGDGKPGYFKQELAVY
GRADKPCISCNAPLKEIRQAQRSTVFCVNCQS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttaccagaagtagaaaccaccttacgtggcatcgagcccaaattagttgga
cgcactcttgctagagtggatattcgtcagccaaagctgcgctggttaatcacgcctgag
ctaagctcagaaatggtaggtgaggaaattactcatctttcccgtcgtggtaaatacatt
ggtattcatacgtcaaaaggcaccttggttgttcatcttggtatgtctggtagtttgtat
tttgtgcctgccgagacgccgccgttgtttcatgatcatgtggatttttgctttgccgat
gacgatgtatggttgagatatacggatccgagacgtttcggggcaattctgtggacaacg
aaagattggaacgagcatgaactaatcgcacatttaggcccagagccgctctcagagctt
tttaatgctgacatgctgtatgcgagagcgaaggggcgcaaagttcctattaagactttt
atcatggacagcaagatcgtggtgggagttggtaatatttatgcgaatgaagcgctattt
aaagcgggaatccgtccagatcgtttggcgggtaaaattagtaaagtgcgtctggcgcgt
ttggtagaatgcattaaagtggtgctggccgctgccattaaacagggcggaaccacgcta
aaagactttgttggtggtgatggcaaaccgggctactttaaacaagaattagcggtttat
ggtcgagcagacaaaccatgtatctcatgcaatgctcccttaaaagaaattcgtcaggct
caacgtagcactgttttttgcgttaattgccaatcttga
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