KEGG   Marinomonas foliarum: JSY38_11845
Entry
JSY38_11845       CDS       T07165                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mfoi  Marinomonas foliarum
Pathway
mfoi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mfoi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JSY38_11845 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mfoi03021]
    JSY38_11845 (rho)
   03019 Messenger RNA biogenesis [BR:mfoi03019]
    JSY38_11845 (rho)
Transcription machinery [BR:mfoi03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     JSY38_11845 (rho)
Messenger RNA biogenesis [BR:mfoi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     JSY38_11845 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_25 AAA_22 Fungal_virus_P2_C S1CSD-TOTE-2 NACHT Spore_III_AA AAA
Other DBs
NCBI-ProteinID: QRV22761
UniProt: A0A368ZKT2
LinkDB
Position
complement(2562648..2563913)
AA seq 421 aa
MNLTDLKQKSVHELLDIAAEMGLDNMARSRKQDVIFSILKRHAKGGEDIYGDGILEILQD
GFGFLRSPDSSYLAGPDDIYVSPSQIRRFNLRTGDTIAGKIRPPKDGERYFALLKVNEIN
FDKPESVRNKILFENLTPLFPDERLLMEAGNGSTEDVTSRIIDLVAPMGKGQRALVVSPP
KAGKTFMLQNIANSITRNNPECHMIVLLIDERPEEVTEMSRTVRGEVVASTFDEPPARHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVIPSSGKVLTGGVDANALERPKRF
FGAARNIEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNSELHLDRKIAEKRTFPAINI
RRSGTRREDLLTSEDELQRMWILRKLLNPMEDVAATEFLIDRLKVTQTNDEFFESMKGKN
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaaccttaccgacttaaaacagaaatcagtacacgaacttttagacatcgcagcagaa
atgggcctagacaacatggctcgctcccgtaagcaagatgttattttctcaatcttaaag
cgtcatgcgaaaggtggggaagacatttacggcgacggtatcttagagattcttcaagat
ggctttggcttcctacgttcacctgacagctcatacctagcgggtcctgacgatatatat
gtgtcaccaagccaaattagacgattcaaccttcgtactggcgacactattgccggtaaa
attcgtcctccgaaggatggtgagcgctattttgctctattaaaagtcaatgaaatcaac
tttgataagcctgaaagcgttcgcaataaaattcttttcgaaaacttaactcccctattc
cctgatgaacgacttcttatggaagctggcaacggctctacggaagatgtgacatcgcgt
attatcgaccttgttgccccaatggggaaaggtcagcgcgccttggttgtttcaccgcca
aaagcgggtaaaaccttcatgttgcaaaacattgctaactccatcactcgtaacaaccct
gaatgccatatgatcgtcctattgatcgatgaacgccctgaggaagtgacagagatgtct
cgtaccgttcgtggtgaagttgttgcctctacatttgatgagccaccagctcgccacgtg
caagttgcagaaatggtaatcgaaaaagcaaaacgacttgtcgagcataaacgtgacgtg
gttatcctattggattccatcactcgtctggcacgcgcctacaacactgtaatcccttca
tctggtaaagtactaaccggtggtgtggatgcaaacgctctagaacgtccaaaacgtttc
tttggtgcagcacgtaatatcgaagaaggcggtagtttaaccatcatcgcaacagcgctt
gttgatacaggctctaaaatggatgaagttatctttgaggaattcaaaggtactggtaac
tccgaattgcacttagatcgtaaaatcgcagaaaaacgcactttcccagcgatcaatatt
cgtcgttcaggtactcgtcgtgaagatttactgacatcagaggacgaactgcaacgtatg
tggattcttcgcaagctattgaatcctatggaagatgttgccgcgacagaattccttatc
gaccgtctaaaagtgactcaaacaaacgatgagttctttgaatcaatgaaaggcaaaaac
aaatag

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