Marinomonas foliarum: JSY38_13445
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Entry
JSY38_13445 CDS
T07165
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mfoi
Marinomonas foliarum
Pathway
mfoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JSY38_13445 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoi03019
]
JSY38_13445 (pnp)
03016 Transfer RNA biogenesis [BR:
mfoi03016
]
JSY38_13445 (pnp)
Enzymes [BR:
mfoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JSY38_13445 (pnp)
Messenger RNA biogenesis [BR:
mfoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JSY38_13445 (pnp)
Transfer RNA biogenesis [BR:
mfoi03016
]
Prokaryotic type
tRNA degradation factors
JSY38_13445 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
KH-I_KHDC4-BBP
S1_RRP5
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
QRV23064
UniProt:
A0A369AE08
LinkDB
All DBs
Position
2901440..2903548
Genome browser
AA seq
702 aa
AA seq
DB search
MSITTKTFQFGNDTVTLETGRVARQATGAVLCTIGDAQVLATVVGAKSAKPGQDFFPLSV
HYQERAYAVGKIPGGFLKREGRPSEKETLTSRLIDRPIRPLFPKGFMNEVQVVCTVMSTN
TNLDADIAAMLATSAALTISGIPFNGPIGAARVGFNDESGYVLNPSYSDLDGSLLDMVVA
GTKDAVLMVESEAQELTEDEMLGAVLYAHKEMQSAISAITEFAAECAKPRWDWVADAANV
SLTDALQSGYAAQIEDAYGISEKMARYAQLGVVRDAAVAALVTEEGEFSEADVTGAFSKL
EKRIVRRRVIDGKPRIDGRDNKTVRPIDVEVGLLSKTHGSALFTRGETQAIATCTLGTSR
DSQMTDGLTGESKDSFMLHYNFPPYSVGECGRMGGVGRREIGHGRLARRGVQAVLPSEDE
FPYTIRIVSEITESNGSSSMASVCGASLSMMDAGVPLKAPVAGIAMGLIKEDDGFAVLTD
ILGDEDHLGDMDFKVAGTAEGITALQMDIKIEGINEEIMDIALSQALEARTHILREMAKV
IGYARPEVSPNAPSMATIKIDPEKIRDVIGKGGATIRSITEQTGASIDLDDDGTVRIYAA
DKAASDAALLKIHEITAEAEVDKLYKGKVVRLAEFGAFVNILPGKDGLVHISQIAEERIR
AVSDFLSEGQDVIVKVLDVDARGRIKLSMKDVTEEEKAAYTE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattactacgaaaactttccagttcggtaatgataccgtaactctagaaacaggc
cgcgttgctcgtcaagcaacaggtgctgttctttgtacaattggtgatgcacaagtactt
gctactgttgtgggtgctaaatcagctaaacctggtcaagactttttcccattgtctgtt
cattatcaagagcgtgcttacgctgttggtaaaattccaggtggtttcttaaaacgtgaa
ggtcgtccatctgaaaaagagacgctaacttctcgtttgatcgaccgtccaattcgtcca
ttgtttcctaaaggattcatgaacgaagtgcaggttgtttgtacggttatgtctactaac
actaatctagacgctgacattgcggctatgttggcaacatctgcagcattgactatttct
ggtattccatttaatggtcctatcggtgctgctcgcgtaggttttaacgacgagtctggt
tacgttcttaacccaagctattctgatctagatggttctttgctagacatggttgtagcg
ggtactaaagacgcagtattgatggttgagtcagaagcgcaagagcttactgaagacgaa
atgctaggtgctgttctttacgctcataaagaaatgcaatctgctatctctgctattact
gaatttgcagctgagtgcgctaagcctcgctgggattgggttgcagatgcggcaaacgtt
tctttgactgatgctcttcagtctggttatgccgctcaaatcgaagatgcatacggaatc
agtgaaaaaatggctcgttacgctcaactcggtgttgttcgtgatgcggctgttgctgcg
ctagttactgaagaaggtgagttctcagaagcggatgttactggtgctttctctaaacta
gaaaaacgcattgttcgtcgtcgtgtaattgatggtaagcctcgtattgatggtcgtgac
aacaaaacggttcgtccaattgatgttgaagtgggtttgctaagcaaaactcacggctct
gctttgtttacacgtggcgaaactcaggcaattgcaacttgtactctaggtactagccgt
gattcacaaatgactgatggtttgactggcgaaagcaaagatagcttcatgcttcattac
aacttccctccttactctgtaggtgagtgtggtcgtatgggtggtgtgggtcgtcgtgaa
attggtcacggtcgtctagctcgtcgtggtgttcaagcagtattgccttctgaagatgaa
ttcccatacacaattcgtatcgtgtctgagattactgaatctaacggttcaagctctatg
gcgtctgtttgtggtgcgtctttgtctatgatggatgcgggcgttcctttgaaagcacca
gttgcaggtattgcaatgggtcttatcaaagaagacgacggctttgctgtattgactgat
atcttgggtgatgaagatcaccttggcgatatggactttaaagtagcgggtactgcagaa
ggtatcactgcgcttcaaatggacatcaaaattgaaggtatcaacgaagaaattatggat
atcgccttgagtcaagcgcttgaagctcgtactcatatccttcgtgaaatggcgaaagtt
atcggttatgctcgtccagaagtttctccaaatgcaccttctatggcgacgatcaaaatt
gatcctgagaaaattcgtgacgttatcggtaaaggcggtgcaacaatccgttctatcact
gaacagacaggtgcttctatcgatctagatgacgatggtactgttcgtatctacgctgca
gataaagcggcttcagatgcagccttgcttaagattcatgaaatcactgcagaagcagaa
gtggataaactttacaaaggtaaagttgttcgcctagctgagtttggtgcattcgtaaat
atcttacctggtaaagacggcctagttcatatttctcaaatcgctgaagagcgtattcgt
gcggtctctgacttcttgtcagaaggtcaagacgtgattgttaaagtactagacgttgat
gctcgtggtcgtatcaagctttctatgaaagatgtaacggaagaagaaaaagcagcttac
actgagtaa
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