Marinomonas foliarum: JSY38_15110
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Entry
JSY38_15110 CDS
T07165
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mfoi
Marinomonas foliarum
Pathway
mfoi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JSY38_15110 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfoi03400
]
JSY38_15110 (uvrB)
DNA repair and recombination proteins [BR:
mfoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JSY38_15110 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JSY38_15110 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
AAA_22
Viral_helicase1
DUF4665
Motif
Other DBs
NCBI-ProteinID:
QRV23366
UniProt:
A0ABX7IML0
LinkDB
All DBs
Position
3242626..3244650
Genome browser
AA seq
674 aa
AA seq
DB search
MSHEFQVVSSYSPAGDQPKAIEKLVSGVEAGLAHQTLLGVTGSGKTYTIANVISQVKRPT
IVMAHNKTLAAQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVAASDTFIEKDASVNEHIE
QMRLSATKALLEREDVIIVATVSAIYGLGDPQSYLKMMLHLDRGDRIDQRDVLRRLAELQ
YSRNDLVLERGNFRVRGDVIEVFPADSEDTAIRIELFDDEIEALSMIDPLTNKTIRKVPR
VTIYPKTHYVTPKETVQAAIERIKVELDQRLEQLKSLNKLVEMQRLDQRTRYDLEMMQEL
GYCNGIENYSRYLSGREEGSPPPTLFDYLPANALLVIDESHVTVSQIGAMYKGDRSRKEN
LVEYGFRLPSALDNRPMRFEEWEQIKPQTIFVSATPGKYEEEHQDWVVEQIVRPTGLIDP
TLEVRPVATQVDDLLSEINLRLPLGERVLVTTLTKRMAEDLSDYLSDHGVRVRYLHSDID
TVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSEKSLIQTIGR
AARNVNGKAILYADRITGSMDRAISETNRRREKQQAHNEEHGITPTGITKSVEDIMEGAY
NPGAGKRGNKTKKVAETAKDYQVESMEDVAQVRKAMIQLQKEMMQASEELKFELAAGYRD
QIRQLQKKLKDVGE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcacgagtttcaggttgtttcatcttattcacccgcaggcgatcagcctaaagcc
attgagaaacttgtgagtggcgtagaagctggtttagcacatcaaacactgcttggtgtt
acaggttcaggtaaaacctacaccattgccaatgtgatttctcaagtgaagcgcccaacc
attgtaatggcgcataacaaaaccttggcggcacagctttatggcgaatttaaagagttc
ttccccaataatgccgtagagtattttgtttcctactacgattattaccagccagaagcc
tacgttgctgcatctgatacttttattgagaaagacgcgtcggtcaacgagcatatagag
caaatgcgcctatcggcgactaaagccttattagagcgtgaagacgttattatcgttgcc
accgtgtcggcgatttatggtttgggtgatccgcaatcttatttaaaaatgatgctgcac
cttgatcgtggtgatcgcattgatcaacgcgatgtattgcgtcgtttggctgaactgcaa
tacagtcgcaacgatttggtactagagcgtggtaatttccgtgttcgtggcgatgtgatt
gaggtttttcctgcagactcggaagatactgcaattcgtatcgaattgtttgatgatgaa
attgaagccttgtcgatgatcgatcctcttaccaacaaaaccattcgcaaagtgcctcga
gtgacgatttacccgaaaactcactacgtgacgccaaaagaaaccgtgcaagcggcgatt
gagcgtattaaagtggagttggatcagcgccttgaacagctaaaatcactgaacaaatta
gtggaaatgcagcgtcttgatcagcgtacgcgatacgatctagaaatgatgcaagagctt
ggctactgcaacggcatcgaaaactattcgcgctacttatcgggccgagaagaaggttca
ccacccccaacgttatttgattatttaccagcgaatgctctgctcgttatcgatgaatcc
cacgttaccgtgtcgcagattggcgccatgtacaaaggtgacagatcacgtaaagagaac
cttgttgaatatggcttccgtttgccttcagctcttgataaccgtcctatgcgatttgaa
gagtgggaacagattaaaccgcagaccatttttgtctcagccacgcctggaaaatacgaa
gaagagcatcaggactgggtagtcgagcagattgtgcgtccgactggcttgatagatcca
actttagaagttcgaccagtggcgactcaggtggacgatttattgtcagagataaactta
cgactacctcttggtgagcgcgtattggtgacaactctgacaaaacgtatggcagaagat
ttaagcgattacctaagtgaccatggtgttcgagtacgttatttacattcggacattgat
accgttgaacgtgttgagataattcgagatttacgtcttggcgagtttgatgttctcgtc
ggtatcaacttattacgagaaggtttggatatacctgaagtgagcttagtggcgattctt
gatgctgataaagaaggcttcttacgctcggaaaaatcacttattcaaaccattggtcgt
gctgctcgtaatgttaacggtaaagctattttatacgcagaccgtattacgggttcaatg
gatcgggcgattagtgaaacgaatcgacgtcgagaaaaacagcaagcccacaacgaagag
catggtattacaccaacaggtattacgaaatctgtcgaagatatcatggaaggagcgtac
aaccctggtgcaggtaaacgtggtaacaaaacgaaaaaagttgctgaaaccgccaaagat
taccaagtggaaagcatggaagacgtggctcaagtgcgtaaagccatgatccaattgcag
aaagaaatgatgcaggcatcagaagagctaaaattcgaactggcagcaggctaccgtgac
caaattcgtcagttacagaaaaaactaaaagacgttggtgaatga
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