Marinomonas foliarum: JSY38_17610
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Entry
JSY38_17610 CDS
T07165
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mfoi
Marinomonas foliarum
Pathway
mfoi03030
DNA replication
mfoi03430
Mismatch repair
mfoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JSY38_17610 (dnaX)
03430 Mismatch repair
JSY38_17610 (dnaX)
03440 Homologous recombination
JSY38_17610 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfoi03032
]
JSY38_17610 (dnaX)
03400 DNA repair and recombination proteins [BR:
mfoi03400
]
JSY38_17610 (dnaX)
Enzymes [BR:
mfoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JSY38_17610 (dnaX)
DNA replication proteins [BR:
mfoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JSY38_17610 (dnaX)
DNA repair and recombination proteins [BR:
mfoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JSY38_17610 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
AAA_22
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_5
AAA_30
AAA_18
AAA_14
ResIII
AAA_2
AAA_19
TIP49
TniB
TsaE
Rad17
nSTAND3
PIF1
RsgA_GTPase
bZIP_C
Motif
Other DBs
NCBI-ProteinID:
QRV23806
LinkDB
All DBs
Position
3800390..3802615
Genome browser
AA seq
741 aa
AA seq
DB search
MSYQVLARKWRPQTFLEMAGQDHVLQALVNALRQQRLHHAYLFTGTRGVGKTTIARIFAK
CLNCETNGISPEPCGTCDSCREIAEGRFVDLIEVDAASRTKVEDTRELLENVQYAPTRGR
FKVYLIDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFNLKNMS
PQRVVDYLQTVLNTEQVNFDQPALWQIGQAANGSMRDALSLTDQAIAFGNGTISESGVTA
MLGLVNQAQVLDLLESVASKNAAQVLNRIEQLADYQPDFAAICGSLLDVLHRVAIEQQVP
DALTDQLGDLVRIKNIAASVSSEEIQMMYQSLLIGRRDLHLAHSARAGFEMLMLRLIAFR
PAPPMVVSHNAPPVMSTEPMDHAAEPEYSSQRMTEKKTPSIEPEAVVTEPLEQVVEQESV
TPMTPAERPPWEDAPKSQIPVEDNSEDLVATDNNAIESVSLQGDVVEEQVEEPQVDTIDP
VEDVELNEVEALGSAESLDSVQQEPEAQSESRDKPNVEPKSFVIDEEKFAEHAEDESDDE
DEDDEEAEERAIADVADPFNPAADLVDALGEEPVEETVVEESKEPDTRLAKVPDIIAQPA
LGMTMPSLNHYNELTMKLWWLVAPRLPLTGLVQNILMNSSLVDASDQGIRLEVPLEYGHM
LNQVRYEQIQGALSDFFTMPVPLIIDTVEDTSGVTAEEFAASKRAEALQVAIEHLNSHPI
VQALSATMGAQLVYDTVKVKA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgagctaccaagtactcgcacgaaaatggcgcccacagactttccttgaaatggctggg
caagaccatgtacttcaagcgttggtaaatgccttacgccaacagcgtttacatcacgct
tatttgtttactggtacacgcggtgtcggtaaaaccacgatcgcgcgcatttttgctaaa
tgcttaaactgtgaaaccaatggcatttcccctgagccttgtggaacctgcgatagttgc
cgagaaatcgccgaaggtcgttttgttgatctaattgaagtggatgcggcatctcgtacc
aaggtagaagatacccgtgaattattagaaaacgtacaatacgcgccaactcgtggacgc
tttaaagtctacctgatagacgaagtgcacatgctgtcgactcattccttcaatgcgtta
ttaaaaacccttgaagagccgccagctcatgtcaaatttctgctagcaacgaccgatcca
cagaagcttcctgtgaccattttgtctcgttgtttgcagttcaaccttaaaaatatgtcg
ccacagcgcgtggtggactatttgcaaaccgtgcttaacaccgagcaagttaattttgac
cagccagcgctttggcaaattggacaagcagccaatggcagtatgcgtgatgccttgagt
ttgacggatcaagcgattgcttttggcaatgggacgatttcggaatccggtgtgaccgcg
atgctgggcttggtgaaccaagcacaagtattggatttattagaaagcgtagcgtctaag
aacgcagcacaagtgttgaatagaatagagcaacttgccgattatcaaccagattttgcg
gcgatttgtggcagcttgcttgatgttttgcatcgagtggcgatagagcaacaagtaccc
gatgcattaacagatcagttaggtgatttagtccgtattaaaaacattgcggccagtgtg
agctctgaagaaatacaaatgatgtatcagagtctattgattggccgtcgtgatttacat
ttagcgcactcagctcgtgctggctttgaaatgttgatgctaaggttaatcgcgtttcgt
cccgcaccgcctatggtagtgagccataatgcaccaccagttatgtctacggaacctatg
gatcacgctgctgaaccagagtattcgtcacagcggatgacggaaaaaaaaacaccatcg
attgagccagaggctgtcgttacagaaccattagaacaggttgttgagcaagagtctgtt
acgccaatgacaccagcagagcgcccgccttgggaagacgctccaaaatcacaaatccct
gttgaagataattcagaagacctcgttgcaactgacaataatgctattgaaagcgtaagt
cttcaaggtgatgtggtagaggagcaggttgaagagccacaagtcgatacaattgatccc
gttgaggatgttgagcttaatgaagttgaagctcttggttcagctgaatccttagattct
gtgcagcaagaaccagaagcacaatcagaaagcagagataagcctaatgttgaacctaag
tcttttgttatagatgaagaaaagtttgcagaacacgctgaagacgaaagtgacgacgaa
gatgaggatgacgaagaagcagaggagcgagcaatcgctgacgtcgccgatccatttaat
cccgctgcggacctagtcgatgccttgggcgaggaaccggttgaagagactgttgttgaa
gaaagcaaagagccagatactcgtttagctaaagtgccggatattatcgctcagcctgcg
ctgggaatgacgatgccaagcttgaatcattataacgaattaaccatgaagctctggtgg
ctggtggcgccgcgtctgcctttgacaggcttggtgcaaaatattttaatgaactctagc
ttggttgatgcaagcgatcaaggcattcgcttagaagtgccgttagaatacgggcacatg
ttaaatcaggttcgttatgaacaaatacaaggcgcgctgagtgactttttcaccatgcca
gtgcctctgattatcgatactgtggaagatacttcaggtgttaccgcagaagaatttgcc
gccagcaagcgggcagaagccttgcaggtggcaatagaacatttaaattcacatccgatt
gtgcaagctttgtcggcaacgatgggcgcacagttggtttacgatacggttaaagttaaa
gcttaa
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