Marinomonas foliarum: JSY38_17920
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Entry
JSY38_17920 CDS
T07165
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mfoi
Marinomonas foliarum
Pathway
mfoi03420
Nucleotide excision repair
mfoi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JSY38_17920
03430 Mismatch repair
JSY38_17920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfoi03400
]
JSY38_17920
Enzymes [BR:
mfoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JSY38_17920
DNA repair and recombination proteins [BR:
mfoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JSY38_17920
MMR (mismatch excision repair)
Other MMR factors
JSY38_17920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QRV25834
LinkDB
All DBs
Position
3870537..3872816
Genome browser
AA seq
759 aa
AA seq
DB search
MTSSLTDEQQSVVHHDLSLPAKVIAVAGAGKTTTLISRIEHLLAQGVDPSHIGVFMFNKS
AQEEFSERLSKRLMSAGHLRSPSVMTFHAFGMKFCRRLEQQGWLASAKLITDDFSLVKML
REALQRLVRNGEKIAILDEKDWLEDVLLFVDQVKASDQPAQIVFEALGWSNERKFFPALY
DELEKLRKRNNIRFFADLLSDPYELISELDEAERVRVRGLVPDFRYLLIDEFQDINPCQY
ELLKLLYPVPCQWMIVGDVQQCIYEWRGASPEIMASQFDQDFSNVATYPLSTSFRFGHAV
GLMASSVISENDPDALVIGAGERTRVSFARAPKTGKALLGELKSWVDEGRALSDTAVLVR
LYSDMVPVQLALMHKGVPYQLHGDSPLLENRQIRMLMAYLAVIAGGLETSNTFFHPDDIE
YLLTVPSLGGSMAQRKTLIQQAKQSPHLLPQIIESVADATDGWRAKKLYERADWLRSLGI
YRTDPGQGLAHTLEKLGIYRYFESTSSKDIQTQEKIATCDAFMAYVRGVGGDAKSILEQL
ATLNEKQTDDVHGVHLMTIHKSKGLEFDQVLLSGLQEGRFPYYDEDLSAIDKQAASDMAS
ERRLFYVAITRAKQKLVLLESPSADEHKRMKQGDIPRAALKSLSLSRFVFEAQPYAVSHI
CEAWYSENTGTQIDTEKGSVFQRYLNAVDPSPALTFRHRVEGKSLLQPGDKVRHDQFGQG
VVVRQERDAKQMIFVDFGEMGLKRFNPKHTQLIKLSSRA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcctcgttaaccgatgagcagcaaagcgttgttcatcacgatctttcgttgcca
gcaaaagtcatcgccgtagcgggcgcgggtaaaaccaccaccttaatttctcgtatcgag
catctgttggctcagggtgtggatccgtcgcacattggcgtgtttatgtttaacaaaagc
gcgcaagaggaattttccgagcgtttgagcaagcgactcatgagtgctgggcatttgcgt
tcaccaagcgtgatgacctttcatgcctttggtatgaagttttgccgccgcttagaacag
caaggttggctagcgagtgccaagttaattaccgacgattttagtttggtaaaaatgtta
cgcgaggcgttacagcgtttggttcgcaatggtgagaaaatcgctattttagacgagaaa
gattggctagaagatgtcttgttgtttgtcgatcaagtgaaagcttctgaccaacccgcg
cagatcgtttttgaagctttgggctggtctaacgaacgtaagtttttcccagcgttatat
gatgagttagaaaaactgcgcaagcgtaataacatacgcttttttgccgatttactcagc
gacccttatgaattaatcagtgaattagacgaagctgaacgcgtgagagtgcgtggtttg
gtgccggattttcgttacttgctaattgacgagtttcaagacattaacccttgccaatac
gaattgctcaagctgctttatccagtgccttgccaatggatgattgtcggcgatgttcag
cagtgtatttatgaatggcgcggtgctagtccagagattatggcgagtcagtttgatcaa
gacttttcaaacgtagcgacttatccgttgagcacaagttttcgttttggccatgccgtc
ggtttaatggcgtcgagcgtgatcagtgaaaacgatcctgatgccttggtgattggcgct
ggcgagcgcacgcgagtgtcttttgcccgcgctccgaaaacgggtaaggcgttgttgggg
gagctgaaatcttgggttgatgaaggtcgtgcattgagcgataccgcggtattggtacgc
ttgtacagtgacatggtgccagtgcaactcgccttgatgcacaagggcgtgccgtatcaa
ttacatggtgactcgccattgttggaaaaccgccaaattcgcatgctaatggcgtatctg
gcggtgattgctggtggtttggaaacgtcgaacaccttttttcatccggatgatattgaa
tacttgctgacggtgccgagccttggtggttctatggcgcagcgcaaaaccttgattcaa
caagcgaaacagtctccgcatttgttgccgcagattatcgagtccgtggccgatgctacg
gatggctggcgtgcgaaaaaactatacgaacgtgctgattggttgcgcagcttaggcatt
tatcgcaccgatccggggcaaggcttagcgcataccttggagaagttgggcatttatcgt
tatttcgaaagcaccagcagcaaagatattcagacccaagaaaagatcgccacctgcgat
gcctttatggcctatgtgcgaggtgtgggcggtgatgccaagtcgatcttggaacaactt
gccaccctgaatgaaaagcaaacggacgatgttcacggcgtgcatttgatgacgattcat
aagtcgaaaggcttggagttcgatcaggtgctattgtctggcttacaagaaggccgcttc
ccgtattatgacgaggatttgagcgccatagacaagcaggccgccagtgatatggcatcg
gaacgacgtttgttttatgtggccattacgcgggcaaaacagaagttagtcctgctcgaa
tccccaagtgctgatgagcacaaacgtatgaaacagggtgacattccccgtgctgcgttg
aaaagcttgtccttgtcgcgttttgtgttcgaagcgcagccgtacgcggtgagccatatt
tgtgaagcttggtacagtgaaaatactggcacgcaaattgatacggagaaaggttcggtg
tttcagcgctatttaaatgcggttgatccttcgcctgctttaacctttcgccatcgtgta
gaaggtaagagtctattacagcccggcgacaaagtccgtcacgaccaatttggtcagggc
gttgttgtccgacaagagcgagacgccaagcaaatgattttcgtggattttggtgaaatg
ggtctaaaacgctttaatcccaagcatacacaacttataaaattgtcttccagagcttaa
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