Marinomonas foliarum: JSY38_18075
Help
Entry
JSY38_18075 CDS
T07165
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
mfoi
Marinomonas foliarum
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mfoi03009
]
JSY38_18075
Enzymes [BR:
mfoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JSY38_18075
Ribosome biogenesis [BR:
mfoi03009
]
Prokaryotic type
rRNA helicases
JSY38_18075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
AAA_11
UTP25_NTPase-like
Helicase_RecD
Cas3-like_C_2
MINION
Helicase_C_2
RPAP3_C
Motif
Other DBs
NCBI-ProteinID:
QRV23892
LinkDB
All DBs
Position
complement(3905925..3907130)
Genome browser
AA seq
401 aa
AA seq
DB search
MSFAELDLDFTIEQAISDLGFETPTEIQEQAIPIALDGSDLLATAPTGTGKTIAFCAPAI
QHILDRDEQSTTAPKVLILAPSRELARQIFNVVEQLTQHTRIQSHLIIGGTPYGMQQQQL
SEPCDILVATPGRLVELDDKQWLDLTDVSYFVIDEADRMLDMGFVNAINHIAKELPTEHQ
TLMFSATLEGEKMGRFASALLNSETQQIRLGESARTVPSQIRQLAYRVDSEEHKEAILKH
LLTQERVQQAVLFVSNREHVDVWVQRIRKMGLMCDGLHGEMKQGDRSEHMKQMKRGRLQV
LVATDVASRGIDLPEINTVINLRLPRKADSYIHRAGRASREGEPGDCISLIDINDLPMIE
KIQRFMQANIKFGRIEGLEAKTKARSPSSKKKKKKPAPSKK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgctgaattagatctggatttcaccatagaacaagccattagtgatcttggt
tttgaaaccccaacggaaatccaagaacaagcaataccaattgccttagatggctctgat
ctccttgcaaccgcaccaactggcacaggcaaaaccatcgcattttgtgcaccagccatt
caacatattcttgaccgtgatgagcaatctactacggcgccaaaagtactaattttagcg
ccaagtcgtgagctagcacgccaaattttcaatgtcgtagaacagctaacgcaacacaca
cgcattcagtctcacctaattatcggtggcacaccctatggaatgcagcagcaacaacta
agcgaaccatgtgatattttggtcgccacccctggccgacttgtcgaactagacgataaa
caatggctagacttaacagacgtatcttactttgttatcgacgaagctgaccgtatgtta
gatatggggttcgttaatgccattaaccacatcgccaaagagttaccaacagaacaccaa
acgctaatgttttccgccacattagagggcgaaaaaatgggccgctttgctagcgcgcta
ttaaacagcgaaactcaacagattcgccttggtgaatctgcacgcacggtaccgagccaa
attcgtcaattggcctaccgagtcgatagtgaagaacacaaagaagccatactaaagcat
ttattaacacaagaacgcgttcaacaagccgtactctttgtttctaatcgggagcacgta
gatgtatgggttcaacgtattcgcaaaatgggcttaatgtgtgatggcttgcacggtgaa
atgaaacaaggcgaccgcagcgagcacatgaaacaaatgaaacgtggccgcttgcaagta
ttggtcgcaaccgatgtggcatctcgcggtatcgatcttcctgaaatcaacacagtaatt
aacttgcgtctaccacgcaaagcggattcctatattcaccgcgcaggtcgagcttcacgt
gaaggcgagcctggtgattgcatctcattaatcgatattaacgatttaccaatgatcgag
aagattcagcgcttcatgcaagccaatattaaatttggtcgtatagaagggctagaagca
aaaacaaaagctcgttcgccaagcagcaagaagaaaaagaaaaaaccagcgccaagcaaa
aaataa
DBGET
integrated database retrieval system
