Microaceticoccus formicicus: VZL98_00270
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Entry
VZL98_00270 CDS
T11006
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mfom Microaceticoccus formicicus
Pathway
mfom03018
RNA degradation
Brite
Enzymes [BR:
mfom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VZL98_00270
Messenger RNA biogenesis [BR:
mfom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VZL98_00270
Ribosome biogenesis [BR:
mfom03009
]
Prokaryotic type
rRNA helicases
VZL98_00270
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WVH63420
LinkDB
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Position
66323..67996
Genome browser
AA seq
557 aa
AA seq
DB search
MEINNFKDFNISEEIIRAVNDMGFEEPSSIQSRAIPLVLEGVDMIGQAQTGTGKTAAFGI
PILEKINVNDKSVQAMILCPTRELSIQVAEEISRLAKYMRGVKVLPIYGGQPIDRQIRAL
KQGVQIVVGTPGRVIDHINRRTLKIGNVKIFVLDEADEMFDMGFREDIELVIGHLPEERQ
MTFFSATMAKDIMNFAKTYQKEPEVIKVVKKELTVPKVDQYYFDLEPHMKTEILTRVLDI
YNPNLTIVFCNTKRKVDELTASLQDRGYFAEALHGDLKQSQRDTVMNKFRKLTTDILVAT
DVAARGIDVDEVDMVINYDLPQDDEYYVHRIGRTARAGREGTAFSFVSGKEFYKLRDIQR
YTKTEIVRRQVPTLRDIKATQNEKLLNIITENIDKDEYRKYESVLNVLLEKNYSPIDIAA
ASIGLYVKEKGIGQHEELDYIDNDKKRAPKDQRQKRGKTRDPKKHTGRIFVSAGKKDGVS
ERNILGNIIQYSDINKNEVGRIDIYDNFSFVSVKENIAEQVARDINGTRLKGRQITAEIA
KTRRKSGKSIRRNKKNK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggaaataaataattttaaagattttaatatctcggaagagataatcagagcagtaaat
gatatgggttttgaggagccttcatcaatacaatcaagagcaattccactggtgcttgaa
ggagtggacatgataggacaggctcaaaccggaaccggaaaaaccgctgcattcggtata
cctatacttgagaaaatcaatgtaaatgacaagagcgttcaggcgatgatactatgcccg
acaagagaactttctatacaggttgcagaagagatatcaaggctcgcaaaatatatgaga
ggagtaaaggtacttccaatatacggcggacagccgatagatagacagattagagctctt
aaacaaggagttcagatcgtcgtgggtactcctggtagagttatagaccatataaacaga
agaactctaaagatcggtaatgtaaaaatctttgtgctcgatgaagccgacgagatgttt
gatatgggatttagggaagatatcgagcttgtaataggacatctgcctgaggaaagacaa
atgactttcttctctgccaccatggcaaaagatattatgaattttgccaagacttaccag
aaagaaccggaagttataaaagtagtcaagaaagaattaacagtgccaaaggtggatcag
tattatttcgatttggaaccgcatatgaaaaccgagatactaaccagggttttggatata
tacaatccaaacttgaccatagtattttgtaataccaagagaaaagttgacgagcttact
gcgagtttacaagacagaggttattttgcggaagctcttcatggtgacttaaaacaaagt
caaagagataccgtaatgaacaagttcagaaaactaacaacagatatcctggttgcaacc
gatgtggctgccagaggaatcgacgtggatgaggtggatatggtcattaactatgattta
cctcaagatgatgagtactatgttcatagaatcggtagaactgccagagcaggccgagag
ggaacagcattcagttttgtatcgggtaaggagttctataagctcagagatattcaaaga
tacactaaaaccgagatagtaagaagacaggtacctactcttcgagatataaaagctact
caaaacgaaaagctattgaatataataacagaaaatatagacaaggacgagtatagaaag
tatgaatctgtattaaatgtacttcttgagaaaaactacagtcctatcgatatagcagct
gcctccataggactctatgttaaagaaaaaggtataggtcagcatgaagagctggattat
attgacaatgacaagaaaagagcaccaaaggatcaaaggcagaagagaggaaagactagg
gatcctaagaagcataccggaagaatcttcgtcagcgcaggtaaaaaagatggcgtaagc
gagaggaatatccttggtaatataattcaatattcagatataaataaaaatgaagttgga
agaattgatatttatgacaatttcagttttgtaagcgtaaaagaaaatatagctgaacag
gttgccagagatatcaatggaaccagacttaaaggcagacagattaccgcagagatagca
aaaacacgaagaaaaagcggtaaaagcatcagacgtaataaaaaaaataaataa
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