Microaceticoccus formicicus: VZL98_03500
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Entry
VZL98_03500 CDS
T11006
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mfom Microaceticoccus formicicus
Pathway
mfom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VZL98_03500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfom03021
]
VZL98_03500
03400 DNA repair and recombination proteins [BR:
mfom03400
]
VZL98_03500
Enzymes [BR:
mfom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VZL98_03500
Transcription machinery [BR:
mfom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VZL98_03500
DNA repair and recombination proteins [BR:
mfom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VZL98_03500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WVH64035
LinkDB
All DBs
Position
743637..744581
Genome browser
AA seq
314 aa
AA seq
DB search
MPEELNTKIEILDIIEEDNYAKFAVSPLDRGYGTTLGNSLRRVLLSTFPGAAISKIMIQD
VLHEFSTIPGVIEDVSEIILNIKGVALKMHSKGPVRLTLDVQGPKTVTAGDISEDADVEI
VNKDHHIATLSDTGRIYMELEVVQGKGYSISEQHKDDEDPIGTIPIDASFTPVEKVNFSV
ENCRVGQVIDYDRLILEVWTNGTMTAQEVTAHGAGILIDYLSLFTELPNYSLEEEVEEET
EEVDFTKQLAINIEDLDLSLRSFNCLKRAGIHTVGDIVEKTESEMSKIKNFGKKSLTEVK
NKIEGFGLGFKEEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagaactaaatactaaaattgagattttagatattattgaagaagataactat
gcaaaatttgcagtgtcaccacttgaccgaggttatggaacaacacttggaaacagttta
agaagagtacttctttcgacattccctggagcggccatatccaaaataatgattcaagat
gttttacacgaattttctacaataccgggagttattgaagatgtttctgaaataattcta
aacataaaaggagttgcacttaagatgcactctaagggaccggttagattgactttagat
gtacaaggacctaagactgtaactgccggtgatatatcagaagacgcagatgttgaaatc
gttaataaagatcaccacattgcaactcttagcgatacaggaagaatctacatggaactg
gaagtagttcaaggtaaaggctacagcatttccgagcagcataaagacgacgaagatcct
ataggaacaatccctatagatgcctcctttacaccggtagaaaaagttaacttctcagtt
gaaaactgtagagtaggtcaggtaattgactatgacagattgattcttgaagtttggacc
aatgggaccatgacagcacaagaagtcactgctcatggagcaggaatcttaatagactat
ctgagcttattcaccgaacttccaaactactccttagaagaggaagttgaagaagaaacg
gaagaagtagattttacgaaacagttggcaattaatatcgaagacttagacctctcacta
agaagctttaactgcctaaagagagcaggtatccatacagttggagatattgttgaaaaa
actgaatcagaaatgagtaagattaaaaacttcggtaagaagtcacttacagaagttaaa
aacaaaatcgaaggattcggactaggatttaaagaagaagaataa
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