Microaceticoccus formicicus: VZL98_05455
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Entry
VZL98_05455 CDS
T11006
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
mfom Microaceticoccus formicicus
Pathway
mfom03030
DNA replication
mfom03430
Mismatch repair
mfom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VZL98_05455
03430 Mismatch repair
VZL98_05455
03440 Homologous recombination
VZL98_05455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfom03032
]
VZL98_05455
03400 DNA repair and recombination proteins [BR:
mfom03400
]
VZL98_05455
Enzymes [BR:
mfom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VZL98_05455
DNA replication proteins [BR:
mfom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VZL98_05455
DNA repair and recombination proteins [BR:
mfom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VZL98_05455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
RNase_H_2
DEDDh_C
DNA_pol3_a_NII
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
WVH64376
LinkDB
All DBs
Position
1113236..1117495
Genome browser
AA seq
1419 aa
AA seq
DB search
MKNSEFWNKIAKEVPSIVNIDKVQYDSLDNRLIISLITTSDYDKSDADFIESKVNEAIPN
LKITIKHELNNRQRLSASYIEALFKSYTGKYPWLNHKENECCIKLLEDEVVLEVPNNTLA
NFINKKRIIECLKDDIYKDCGNDVQVKIELVKGLEVEEFLELTDKQEQDISKLILSQKPL
KQPKKASEKSESDFYIGKKIKNEPQNIDTLNQDTHWVTIEGTVFNIEHREIKDKKYIVNF
HIYDETGATSCKAFWSEDSFKKFSENVNENSRVLVNGKYAMDSYEKRYITTINSITLTKE
RTILDNSEVKRVELRVHSQMSTLDGFVKIDELYSKLSKWNHKAVGITDRDVVQAFPFAMD
QTDKTGIKTIYGLDATVVEDFLPIINNTNGKELNTDSYVVFDIETTGLSQLYDSITEIGA
VKVKNGRIIEQFGELIKPERHISDKIVELTGITNEMVENKPLIDSILPKFLEFCEGSTLV
AHNAEFDISFIREFSYRLNLNFNLPYIDTLYLSRFLNPDLRNHKLDTLARKYDVKLLNHH
RAVDDAMATAEVFIAMLNDLKDRNIAVDENINTHETEWPRAANKENNMLILVKDTIGLKN
LYKIVSHSNTVNLYKTPKVLKSFLDSHREGLLIGSGNLLGPLIQNIFGRASEEEIEQTAS
YFDFLEVFPLDNFEHLVENPESRYAINSLEIIKDLNRKIIELGEKLDIPVVATGDVYYLN
SKDHLYRNLIKTVQFTRSVDLSKNLYLKTTEKMLNQFEYLGREKAYEVVVKNTNLVADMI
EEIRPIPKGKYPPRVEGSDEELRELAYKNANAIYGENLPQIVEERLEKELNSIINNGYSV
LYIIAMKLVLKSNEDGYVVGSRGSVGSSFVATMVGITEVNPLVAHYICKHCKYSEFITDG
SYDSGIDMPDKICPECGQPLEKNGHNIPFEVFLGFEGNKEPDIDLNFAGEYQARCHKYTE
ELFGADHVFRAGTIGTIKENTAYGYIKKYSEKIDKTYNPAEIAMLQHGIVGVKRTTGQHP
GGIIVVPNNMEVEDFTPISYPADDPSSGVITTHFTYKSVEDTILKLDLLGHDVPSIIKML
SDLTGVDANNIPLNDSETMEIFRSTDSLNIIEDFSNNTVGSLGIPEFGTSFVRQMLLDTR
PEKFGELVRISGLSHGTNVWLNNAQDLIRQNQAVLGEVICTRDDIMTFLIQRGLEDNMSF
NIMENVRKGKGLKPEHIEAMGKIDLPNWYVDSCMKIEYMFPKAHAVAYVLMSYRIAYFKV
HHPEAFYATFFTIKQNDFPGSLVLKGMESVKREMERIRSLGMEASPKENSQYSVLEVAEE
MYARGIKISNVSLGKSGATKFSVSKEGEIIPPFCALEDVSEQCSIEIHNEFKKSPFISIE
DMVNRTRANKTAVESLRINGVLENLQETNQIDMFSMFDV
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactcagagttctggaataaaatagcaaaagaagttccatcaatagttaatatt
gataaagttcaatacgattcgcttgacaatagactgataatatctttaatcacaacgtct
gactatgacaagtcagacgctgattttatagagtctaaagtaaatgaagcgataccaaat
ttaaaaataaccataaaacatgagctaaataataggcagagactaagtgcctcttatatt
gaagctctttttaagtcatatacaggaaaatatccttggcttaatcataaggagaatgaa
tgctgtataaaactattggaagatgaagtagtactcgaggttccaaataatactctagct
aatttcataaataagaagagaattatagaatgtttaaaggacgatatttacaaagactgc
gggaacgatgtacaggtgaaaattgagctggtaaaaggcttggaagttgaagagttcttg
gagttgaccgataaacaggaacaggatatctccaaacttattttatcccagaagcctctc
aaacaaccaaagaaggctagcgaaaaatcagagtctgatttctatattggtaagaaaata
aaaaacgaacctcaaaacatcgatacactaaatcaagatactcactgggtaacgattgaa
ggaaccgtattcaatatagagcatagggagataaaagataagaaatacattgtaaatttc
cacatttacgatgaaacgggtgcaacatcctgtaaagctttctggtcggaggattctttt
aaaaagttcagcgagaatgtcaatgaaaactcaagggtattagtaaacgggaaatacgct
atggacagttacgagaaaaggtatataacgaccataaacagtattactctaaccaaagaa
cgtacaatacttgacaattcagaagttaaaagagttgagcttagggttcattcgcagatg
agtaccttggatggatttgttaaaatagatgagctttatagtaaattgtcaaaatggaac
cataaggctgtaggaataacagacagagatgtggtacaagcttttccttttgcaatggat
caaaccgataagactgggattaagacgatttacggcttggatgccactgtagttgaagac
tttctacccataataaataataccaatggtaaagaactaaataccgactcctatgtcgta
tttgatattgaaacgacgggtttatcacaattgtatgattccattacggaaatcggagcg
gtcaaggttaagaatggaagaataatagagcaatttggggaacttataaagcctgagagg
catatttctgacaaaatagtagagctgaccggtataacaaatgagatggttgagaataaa
cctctgatagacagtatactgcccaaattccttgagttttgtgaaggttcaacattggtt
gcacataatgctgaatttgatattagttttataagagaattttcatacagattaaactta
aattttaatttaccatatattgatacattatatctttcaagatttttaaatcctgattta
agaaatcataaacttgatacattggctagaaaatatgatgtaaagcttttaaatcatcat
agagctgtcgacgatgctatggctaccgcagaagtatttattgcgatgctaaatgattta
aaagacaggaatatagctgtggatgaaaatatcaatactcatgagactgaatggcccaga
gctgcaaataaagaaaataatatgcttatattggtaaaggatacaattggcttaaaaaat
ctttataagattgtatcacattcaaatacagttaatttatataagactccaaaggtctta
aaatcatttttagattctcatagagaaggtttattaataggttcgggaaacttgctggga
ccattgatccaaaatatatttggtagagcaagtgaagaagaaatagagcagactgctagt
tattttgattttttagaagtttttcctctggataattttgaacatctagtagaaaatccg
gaatcaagatacgctattaattcacttgagattatcaaagatttaaatagaaaaataatt
gagctgggcgaaaaactagatattccggtagttgcaacaggtgatgtttactacttaaac
tccaaagaccatttatatcgcaatttaataaaaacagtacaatttacaagaagcgtagat
ttgtctaagaatttatacctaaagactacagaaaaaatgcttaatcaatttgagtatctt
ggtagagagaaagcttatgaagtcgtagttaaaaatacaaatttagtagctgatatgatt
gaagagataagacctattccaaaggggaaatatccacctagagttgaggggtctgatgag
gagttaagagagcttgcctataaaaatgctaatgcaatttacggtgaaaacctacctcaa
atagtcgaagaaaggcttgaaaaagagctcaattcaatcattaataacgggtactcagtc
ctgtatattatagctatgaaactagttttaaaatcaaatgaagacggatacgtcgtcggt
tcaagaggttctgttggaagttcatttgtcgcaactatggttggaataacagaagtaaat
ccgctagtagctcattatatatgcaagcattgtaagtattccgaatttattacggatggg
agttatgattctgggattgatatgccggataaaatctgtcctgaatgcggtcaaccgttg
gaaaaaaatggtcataatataccttttgaagtatttttagggtttgaaggaaataaagaa
cctgatatcgatttgaattttgcaggagaatatcaggctagatgccataaatataccgag
gaactctttggggcggaccatgtatttagagctggtaccataggtacaataaaagaaaac
acagcttatggatatataaaaaaatacagtgaaaaaatagataaaacttataatcctgct
gaaatagctatgttacaacatggtatagtcggtgtaaaaagaacaaccggacagcatccg
ggaggaatcatagtagtcccgaacaatatggaagttgaagattttactccgataagctat
cccgctgatgatccttcttcgggtgtcatcacaactcacttcacatataaatctgtagag
gatacaattcttaaactggatttactagggcacgatgttccaagtattatcaagatgcta
tctgatttgaccggtgttgatgcaaacaatatacctcttaacgactctgagactatggag
atatttagatctacagattcactaaatattatagaggatttcagcaataataccgtggga
agtttaggcataccggaatttggaaccagtttcgtaagacaaatgttattggatacaagg
cctgagaaatttggggaattggttagaatttcaggactgtcacatggaactaatgtatgg
ctaaacaatgcacaggatttgataagacaaaaccaagcggtacttggcgaggtaatatgt
acgagagatgatataatgacattcttaatacaaagaggcttggaagataatatgtcattt
aatatcatggaaaatgttagaaagggaaaaggacttaaacctgaacatattgaagcaatg
gggaaaattgatttacctaattggtatgtcgactcttgtatgaagatagaatacatgttt
cccaaggctcatgcagtagcatatgttctaatgtcttatagaatagcgtattttaaagta
catcatccggaagctttttatgcaacatttttcacgataaaacaaaatgattttccggga
tcattagtgttaaaaggcatggaatctgtgaaaagagagatggaaagaatcaggagtttg
ggcatggaagcatctcctaaagaaaatagccagtatagcgtccttgaagttgcagaagag
atgtatgctagaggaataaaaatcagcaatgtctcacttggaaaatcaggagctacaaag
ttttcagtttcaaaagaaggagaaatcataccaccattttgtgccttagaagatgtttca
gaacagtgctcgatagaaatacacaatgaatttaaaaaatctccattcatttcaattgag
gacatggtgaacaggacaagagctaataagactgcagttgagtctttaagaataaatgga
gttttggaaaacttacaagagacaaatcaaattgatatgttttctatgtttgatgtgtaa
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integrated database retrieval system
