Microaceticoccus formicicus: VZL98_07955
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Entry
VZL98_07955 CDS
T11006
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
mfom Microaceticoccus formicicus
Brite
KEGG Orthology (KO) [BR:
mfom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfom03019
]
VZL98_07955
Messenger RNA biogenesis [BR:
mfom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VZL98_07955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
WVH62630
LinkDB
All DBs
Position
complement(1628977..1629954)
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AA seq
325 aa
AA seq
DB search
METKIKNLVIGQGNQYIVGFVSDIKEGTTSNGENFISLKIYDNEDKIDVKIWQTSQSEID
ALDIRNGSFVVARGKCQLFRDSKQFNVDKSDKLMIRKANDGEFNISEYMPTAPIDYDEIK
QYIINGIEQINDIELRVFVNSIFNDYVDKLISYPASMNVHHDYLNGLGYHIYRMLASALA
LRSVYKNHVNFDYVIAGVILHDIGKVNCYRVSEMGMPEDYTLENSLLGHIPIGLLMLEPY
ELSESKKNLIRHLLLSHHGRPEFGAVVTPMFIEAQLLHHIDIMDASVTIMEAEMDKLNPG
EVSDRIWSLDRTRLFNHAEENTQSK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaaataaagaacttagtaataggtcaagggaatcaatatatagttggattt
gtttcagatataaaagagggaactacttctaatggtgaaaacttcatttctttaaagata
tacgataatgaagacaagatagatgttaaaatctggcaaactagtcaaagcgaaatagat
gcgttagatataagaaatggaagttttgtagtagccagaggaaaatgtcaattattcaga
gattcaaaacagtttaatgtagacaagtctgacaagttaatgataagaaaggcaaatgac
ggagagttcaatatctcggaatacatgcctactgcacccatagattatgatgagataaaa
cagtatattataaatggaattgagcaaatcaacgatattgagctcagagtttttgtcaat
tcgatatttaatgactatgtcgataagctcatatcttatcccgcatcgatgaatgtgcac
catgattatcttaatggtctcggataccatatctacagaatgttagcatctgcattggca
cttagatccgtgtataaaaaccatgtgaattttgattatgtgattgcaggtgtcatctta
cacgatatcggcaaggtaaactgttacagagtttcagagatgggaatgcccgaggactat
actcttgaaaattcactcctgggacatattccaataggtctattgatgttggaaccatat
gagttgtctgagagtaagaaaaatttaattaggcatttattgctctctcatcatggaaga
cctgagtttggggctgtggttacgccgatgttcatagaggcacaattattacatcatata
gatataatggatgcttcagttacaataatggaagctgaaatggacaaattgaatccaggc
gaggtaagcgacagaatatggagtcttgataggacgagattattcaatcacgcggaggaa
aatacacaaagtaaatag
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