Montipora foliosa: 137967931
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Entry
137967931 CDS
T10576
Name
(RefSeq) collagen alpha chain-like
KO
K19719
collagen type II alpha
Organism
mfoo Montipora foliosa
Pathway
mfoo04512
ECM-receptor interaction
Brite
Glycosaminoglycan binding proteins [BR:
mfoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137967931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
137967931
NCBI-ProteinID:
XP_068670634
LinkDB
All DBs
Position
8:6709812..6800532
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AA seq
1398 aa
AA seq
DB search
MLPSNAVSTLLIGLSLFILVQGQDPAPTYPPVRGDPGPQGPNGDPGNQGEAGPSGDQGPQ
GYPGSPGNPGARGDPGERGVVGEPGPPGGGGVGGLSGGVKGPDPDAPGQIKGEPGEPGAR
GPPGSPGKRGPPGIAGQRGILGPPGEQGPRGRNGQPGPPGDPGRDGSDGAPGPKGDQGPA
GGQGPPGPTGIPGLAGETGFKGDKGPQGHKGNKGDQGVPGERGVSGDPGRPGIDGDPGET
GLVGELGKRGRPGPQGQRGPEGPPGDQGSQGPRGQAGAPGSPGVPGAKGDRGEPGVQGDV
GEKGEQGPSGEQGPKGENGRSGNPGRSGAPGEKGNMGPLGPTGPPGQAGAPGSAGVPGAQ
GRSGAPGDRGRAGLPGLQGEKGEKGSQGSPGPVGNSGPQGRSGRRGNPGADGPPGPSGPV
GPAGPPGPRGAPGTDGIPGQKGATGSPGENGLNGAKGDKGAAGLRGQPGQQGSKGPTGQP
GVAGRDGKSGAPGDPGIDGKPGSTGPQGSPGAPGPDGLTGSKGSMGESGADGEPGTPGPP
GAKGETGMSGRRGLTGIPGTQGRQGERGEAGAPGPQGQQGSPGSQGPPGLPGKQGETGEP
GESGTDGTPGTRGERGAQGERGAPGVMGVPGDPGDFGLSGADGKPGERGLPGTPGPVGTP
GVAGLPGQQGPMGPVGSKGSKGEVGATGERGYDGKDGEPGRDGQPGPPGQPGNPGAKGED
GVPGTDGTPGSRGDTGPRGLPGNPGPPGRPGAVGSSGPRGPQGPRGPRGEPGVKGPPGSP
GRPGATGALGQLGKPGDKGAQGNQGRTGPPGLQGDPGKPGASGPPGPPGPSGPPGRDGAD
GQKGSTGEPGRPGKDGLPGQPGSNGKDGEPGAAGTDGRPGDTGSRGPAGPKGERGTPGAT
GATGSSGPQGIQGPKGEAGPPGSNGRNGAPGIPGPRGNQGPPGPPGPDGQDGDNGANGTR
GIPGRGGLKGESGAPGDPGVAGSAGPVGPPGTKGDPGPPGIQGEKGRRGRDGTPGKTGDP
GPQGGQGPKGQQGDKGPDGEKGDKGWNGNPGQTGPQGERGELGPPGRDGVDGPPGPRGVP
GDAGDPGTEGRNGTMGEPGNKGPDGDLGDPGSPGPNGVKGPPGPPGPPGPPGAPGMSEVA
SYLAIGNLEKGPGFRLYSSGGKEIPRQDIKPDDILKSFDEKEKEIDALIAPDGTRKFPAK
TCYDLFLNHKDFKSGEYWIDPNGGTVKDAIFVYCDKKKNSSCVYPKNAKISDLILKKDYQ
SKDDKWLSEAFEKSEEVEYDAHYTQINFLRTLSNFANQNVTYSCRNSKAWKDGEHSIKLM
GSNEMEYHATSKISLRPKVITNECTGGDKLDKWGKTVLEIDTRERSRLPIVDVSAFDVGG
KDQDFKLEIGAACFHHTQ
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgttaccctccaacgcggtttcaactcttctaataggcctttcattatttattcttgta
caaggacaagatccagccccaacatacccacccgtgagaggagaccctgggcctcaggga
ccaaatggtgatcctggcaatcaaggagaggcgggtccaagtggtgaccaaggacctcaa
ggatatcctggtagtcctggtaaccctggcgcaagaggagaccctggagaacgaggtgtt
gttggagaacctggtccccctgggggaggaggagttggtggtttaagtggtggcgttaag
gggccagatccagatgcgcctggtcaaattaagggtgaacctggagaaccgggtgctagg
ggaccccctggatcacctggaaaacgtggccctcctggaattgctggccagcgggggatt
cttggtccccccggagaacaaggacctcgcggcagaaatggtcagccagggccccctgga
gatccaggacgggatggatcagatggagcgccaggaccgaaaggagatcaaggccctgca
ggtggccaaggtccaccgggtcctactggtatccctgggctggctggtgagacaggattc
aaaggagataagggaccacaagggcacaaggggaacaagggagaccaaggtgttcctgga
gaaaggggtgtctctggtgatccaggaagacctggtatcgatggcgatcctggtgaaact
ggattggtaggagaacttgggaaacggggacgaccaggaccacagggccagaggggacct
gaaggaccccctggtgatcagggtagccagggtcccagaggacaagctggtgcacctggt
tcccccggtgttcctggagccaaaggtgatcgtggtgagccaggggtacaaggcgacgta
ggggagaaaggggaacagggaccttctggagagcaagggcctaagggtgagaatggtagg
agtggcaatcccggaagaagtggagctcctggagagaaaggaaacatgggtcctttagga
cccacaggtccaccaggacaagctggagctcctggaagtgccggtgtaccgggtgctcaa
ggaagatctggtgctcctggagataggggccgagcaggattacctgggttacagggcgag
aagggagaaaaaggatcacagggctcacctggccctgttggaaattctggtccacaaggc
agaagtggaagacgaggtaatcctggtgctgatggccccccaggaccttctggtcctgtc
ggacctgcgggtcctcctggtccacgaggtgctcctggaactgatggaataccaggacaa
aagggagcaacagggtccccaggagagaatggactaaatggagcgaagggtgataaggga
gctgctggtcttcgcggtcagccaggacaacaaggttctaagggacccactggccaacca
ggagtggctggtcgagatggcaaaagtggagcacctggagacccagggattgatggaaaa
ccaggatccactggacctcagggatcaccaggtgcacctggtccagatggattgactgga
tcaaaaggatcgatgggtgaatcaggtgccgatggagaacctggaacacctggacctcca
ggagcaaagggtgagactggaatgtctggaaggcgaggacttactggaataccaggaacg
cagggtcgtcaaggtgagagaggagaagcaggagcccctggaccacaaggacaacaggga
tcaccaggaagccagggccctccaggcttacccggaaaacaaggagagactggagagcct
ggagaaagtggaacagatggtactcccggtaccaggggagaacgtggtgctcagggagaa
cgaggagccccaggcgttatgggtgtcccaggagaccctggcgattttggtctgtctggt
gctgatggtaaacctggtgaacgaggtctgcctggtacaccgggtccggttggaactcca
ggtgttgcggggttaccaggacaacaaggacctatgggaccagttggttccaagggatca
aagggtgaagtaggggctactggtgagcgtggatatgatggcaaagatggagaacctgga
agagatggacagcctggaccacctggtcaacctggaaatccaggagcaaagggtgaagat
ggtgtcccaggaacagatggaaccccaggaagccgcggtgacactggaccacgtggatta
cctggaaacccaggacctcctggaagacctggtgcagtgggatctagtggcccacgtggc
ccccaaggacctcgaggaccgcgtggagaacctggcgtaaaaggtccccccggatcgcca
ggaagaccgggtgccactggggctttgggtcaactggggaaaccaggagacaagggcgca
caaggaaaccaaggtcgaacgggaccacctggactgcaaggagatcctggaaaacccgga
gcttctggtccacccggacctccagggccatctggacctccgggtagagacggagctgat
gggcagaagggatcaactggggaaccaggacgacctggaaaggacggcctcccaggacaa
ccaggcagtaatggcaaagatggcgaacctggagcagctggaactgacggacgaccgggc
gataccggctccaggggaccagccgggccaaagggcgaacgaggaacaccgggcgcaact
ggagccactggcagttctggaccacagggcattcagggaccgaagggagaggcaggacca
ccgggatctaatggccgaaatggagcaccgggaatccctgggcctcgaggaaatcaagga
cccccaggtcctcctggtcctgacggacaagatggtgacaatggtgccaatggcactcgt
ggaattcccggacgaggtggtctaaagggagaaagcggcgcacccggagatcccggtgtc
gctgggagtgcaggaccggtcggtccccccggaacgaagggagacccaggaccgcctggt
attcagggagaaaagggacggcgtggacgggatggcactccgggaaaaacgggtgaccct
ggacctcagggaggacagggaccgaaaggacaacagggggacaagggaccagacggcgaa
aaaggagacaaaggctggaacggaaacccgggacagactggtccacagggtgaacggggt
gaactaggacccccaggaagagatggtgtagacgggccaccaggtccaaggggtgttcct
ggcgacgcgggagatccaggaacagaaggaagaaatggcacgatgggtgagcctggtaac
aaaggtcccgatggtgatctgggtgatccaggttcaccgggtcctaatggtgtgaaagga
ccccccggtccgcctggcccaccaggacccccgggagcgcctggcatgtcggaggttgct
agctacttggcgataggaaatcttgagaaaggccccggattccgactctactctagcggt
ggaaaggaaattccaaggcaagacatcaagcccgatgacatcctcaagagctttgacgaa
aaggaaaaagaaatcgacgctctcattgctcctgatggtacaagaaagttccccgccaaa
acgtgttacgatctatttctcaatcacaaggacttcaagagcggtgaatactggatcgat
cctaacggcggaacagttaaagatgccatctttgtgtattgcgacaaaaagaagaactcg
tcatgtgtctacccgaagaatgcaaagatctcggacctcattctgaaaaaagattaccaa
agcaaggatgacaagtggctcagcgaagcgttcgagaagagcgaggaggttgaatacgac
gctcattacactcaaatcaattttctgaggactttaagcaacttcgccaaccaaaatgtc
acctattcctgccgtaactccaaagcgtggaaagatggagaacattcgatcaaacttatg
ggatccaacgaaatggaataccatgccacttccaagatttccctcaggcctaaagtcatt
accaacgaatgcacgggaggagacaagttagacaaatggggcaagactgtcttagagatt
gacaccagagagaggagtcggctaccgatcgtggatgtatcggcttttgacgtcggtgga
aaggaccaagattttaagcttgagatcggagctgcttgcttccatcacacacagtga
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