Montipora foliosa: 137968017
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Entry
137968017 CDS
T10576
Name
(RefSeq) general transcription and DNA repair factor IIH helicase/translocase subunit XPB-like isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mfoo Montipora foliosa
Pathway
mfoo03022
Basal transcription factors
mfoo03420
Nucleotide excision repair
Brite
Enzymes [BR:
mfoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
137968017
Transcription machinery [BR:
mfoo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
137968017
DNA repair and recombination proteins [BR:
mfoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
137968017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137968017
NCBI-ProteinID:
XP_068670728
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Position
8:complement(2590944..2625166)
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AA seq
797 aa
AA seq
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MKGLKRKNGDSSKSSKKTRKSKVEDDDELYAEEESAEDVEIAPKSSAAAVKDEANEDEFG
GKDYRKLINLKGDHASRPLWVAPDGHIFLESFSPVYKHAHDFLIAISEPVCRPEHIHEYR
LTAYSLYAAVSVGLQTSDIIEYLRRLSKTTIPDGIIQFIKICTLSYGKVKLVLKHNRYFV
ESNFPEVLQHLLQDSAVEKCRKRTGEDLELGLGEDQLMKSTVGGKSSLKLNKPQESNGNS
SQANEQDQSSEATSIIPTDISDYIDKIDQDEDEEESQTYSFEVAQEHIETLQKKCIELDY
PLLAEYDFKNDTVNPDLNIDLKPTTVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKTLV
GVTAACTVRKRCLVLCTSGVAVEQWKSQFKMWSTIDDRTICRFTSDAKDKPVNCNIAIST
YSMVSFTGKRSWEAGEVMKFMETQEWGLMILDEVHTIPAKQFRRVLTVVQAHCKLGLTAT
LVREDDKIQDLNFLIGPKLYEANWMELQNNGFIARVQCAEVWCPMTPEFYREYLNIRTRK
RKLLYVMNPNKFRSCEFLIRYHERRNDKVIVFSDNVFALKKYAEKLKKPFIYGPTSQGER
MQILQNFQHNPLVNTIFISKVGDNSFDLPEANVLIQISSHGGSRRQEAQRLGRILRAKKD
MAAEEYNAFFYTLVSTDTEEMYYSAKRQRFLVNQGYSFKVITRLAGMEEENLELGDKRKQ
QELLQQVLAASDADAEEERVASDSISRNSSSSSLVSRRQGSMASMSGADDMMYLEYRSSN
KQSCKSRHPLFKQFRKK
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcctaaagcgcaagaatggtgattcctctaaatcctcaaagaagacaaggaaa
agcaaggtggaagatgacgatgaattatatgcagaagaggaatccgctgaggatgtggag
attgctcccaagtcatctgctgctgctgttaaagatgaagcaaatgaagatgagtttggg
ggcaaagactatcgtaaactgataaatctgaaaggggaccatgcctcaagacccctctgg
gtggcacctgatggacacatttttttagagtctttttctcctgtgtacaaacatgctcat
gattttctcatcgctatttcagagcctgtttgtagaccagagcatatccatgaatacagg
ctgactgcatattcactgtatgctgctgtatctgttggtcttcagacaagtgatatcatt
gaatatttgcgtcgcctgagcaagactacaattcctgatggaataatccagtttattaag
atctgcacactaagctatggcaaagtgaaactggtattgaaacacaacagatactttgtt
gagagcaactttccagaagttctacagcatcttttgcaagattctgcagttgagaaatgc
cgcaaacgaacaggtgaagaccttgaacttggtttaggggaggatcaacttatgaagtcg
actgttggaggaaagtcgtcattgaagctgaacaaaccacaggaatctaatggaaattct
tcccaagcaaatgaacaggatcaatcatcagaagctacatcaattattccaacagacatc
tcagattacattgataaaatagatcaggatgaggatgaagaagagagccaaacatattcc
tttgaggtggctcaggaacacattgaaactttacaaaagaagtgcattgagttggactat
cctttactggctgaatacgatttcaaaaacgatacagtgaatcctgatttgaacattgac
ttgaagccaactacggttttgcgaccgtaccaggaaaagagtcttcgtaaaatgtttggt
aatggtcgcgcaagatctggtgtcattgttcttccttgtggtgcgggcaagacccttgtt
ggtgtgacggcagcttgtacagtaaggaaacgatgtcttgtgctctgtacatccggtgtt
gctgtggaacagtggaaaagccagttcaagatgtggtctacgattgatgatcgtaccata
tgtcgcttcacatcagatgccaaagataaacctgtcaattgtaatatcgccatttctact
tattcgatggtatccttcaccggtaaaagatcttgggaagcgggtgaggtgatgaaattt
atggagacacaagaatggggattaatgatattagatgaggttcacacgataccagctaaa
cagttcagacgagttttgacagttgtccaagcacattgcaagctgggactgacagcaaca
ctggttcgtgaagatgataaaatccaggacctgaatttcctcattggacccaagctttat
gaagccaattggatggaactgcaaaacaacggatttattgcacgagtccagtgcgcagag
gtttggtgcccaatgacgcctgagttttaccgagaatatctgaacatcagaacaagaaag
agaaagttgctgtatgtcatgaaccctaacaagttccgttcttgcgagttcttgattcgt
taccatgaaaggcgtaacgacaaagtcatcgtattttctgacaatgtgttcgctctcaag
aagtatgctgaaaaattaaagaagccttttatctacggcccgacatcccaaggcgaaaga
atgcaaattttacagaactttcagcacaacccactcgtcaacacaatattcatctccaag
gttggagataattcttttgatcttcctgaagcgaatgttctaattcagatttcgtcgcac
ggtggatcaaggagacaggaagctcagcgacttggacgaattctgcgagctaaaaaagac
atggctgccgaggaatacaacgcattcttttacacgcttgtctcgacggacacggaagaa
atgtactactctgcgaagcgccagcggtttttggtgaatcaaggctacagcttcaaggtt
attacaagactggccggaatggaggaggagaacttagaacttggagacaaaaggaaacag
caagaacttcttcaacaggttcttgctgcaagtgatgcagacgctgaagaggaaagagtg
gcgtctgactcgataagccgcaacagctcatcaagttctctcgtgtcccgtcgccaaggt
tcgatggcttccatgtctggagcagatgacatgatgtatttggaatacagaagcagtaac
aagcagtcttgcaaaagcagacatcctctcttcaaacaattcagaaaaaaatga
DBGET
integrated database retrieval system
