Montipora foliosa: 137968111
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Entry
137968111 CDS
T10576
Name
(RefSeq) collagen alpha-1(III) chain-like
KO
K06236
collagen type I alpha
Organism
mfoo Montipora foliosa
Pathway
mfoo04512
ECM-receptor interaction
mfoo04518
Integrin signaling
mfoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137968111
04518 Integrin signaling
137968111
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137968111
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mfoo00536
]
137968111
Glycosaminoglycan binding proteins [BR:
mfoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137968111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
137968111
NCBI-ProteinID:
XP_068670836
LinkDB
All DBs
Position
8:49986720..50073387
Genome browser
AA seq
1404 aa
AA seq
DB search
MGFFDSKIALAVYLALWICKTHAQHGGMGDVIPIQIDPALKGDQGDPGNKGRGGLPGPPG
PRGGQGEPGVNGPDGPPGPRGPNGPQGPIGPPGPPGNPLVITIGIPGAPGKRGDRGPAGR
DGPAGLPGEPGSPGAPGMRGLPGPPGAPGDAGQPGRPGQNGTVGQPGLRGPVGPPGSPGS
TGPNGEKGADGAKGDRGRMGLKGPKGLRGAQGRKGDQGIAGADGRNGTNGLPGDRGETGP
DGPPGPSGVMGQNGQGGIRGQPGPPGVPGPTGVPGSPGEKGSTGDPGVAGEQGKQGLQGR
RGGQGPQGDPGTDGNPGSDGSEGQKGAQGDPGPMGPQGLPGAPGRPGKAGEDGSVGPSGA
QGDSGPNGPPGLPGQTGTRGDQGPPGAPGPKGPSGRQGRRGKTGRLGATGEQGPPGEQGP
RGAVGAAGIPGTDGRRGEPGHNGNDGVKGERGPDGIPGEDGIPGPRGPPGPPGSPGGDGK
NGDKGAKGKDGEPGKSGPPGPPGPPGSVGMTGKKGELGAFGKPGAAGPPGPKGPQGARGD
FGERGETGQPGTDGAPGQRGLPGPVGIPGLMGSQGEPGAPGSPGPDGKKGPPGERGRDGL
PGDPGPVGPQGELGPQGESGIKGEKGRPGENGADGTPGERGERGPQGAQGNAGASGPPGL
PGSPGPVGNKGDPGDPGPPGPRGNPGRDGKRGYAGTPGSPGAQGETGPRGTPGLFGTPGV
PGDAGLSGPRGPQGPPGPSGENGADGASGPPGAPGLMGDQGEQGAPGDMGEVGPEGDVGP
IGPQGPPGTVGAPGIMGAIGVAGPPGDNGAPGPIGLPGPMGPPGQDGERGLDGAKGDPGE
SGADGKRGLTGQPGLDGRPGLRGKQGEAGKRGPPGPPGPPGPRGDAGPPGSNGATGPQGS
AGRNGPRGQPGAGGEPGSDGPPGQPGPDGPPGSPGKPGFRGQDGTPGLPGTPGTPGARGK
KGAKGFPGTTGTDGAPGPRGGAGPRGPSGNRGPKGKEGISGEDGGNGERGLVGDTGEEGA
KGVRGAQGDRGEKGTRGLPGSLGRQGLPGRVGPTGEPGYNGAAGPQGSKGNPGPMGEVGP
DGFTGLPGATGDKGLKGRPGTRGFAGAPGRVGPPGPPGPRGADGYPAAALERISRAGPSK
GPSGGGGGPPAPEPGPGPLEEESERFNRKRRSVDVEMQIADRVAYLAEKMFLLERRANSS
LFPAKTCRDLKICHPGSPLSNGNYRIDPNGGSSEDQFMAFCNFTTKATCVRPKVKKLDKD
TWKTPVDPRMKVAWFAEDLNNDVKIEYEIDEVQLSYLQLLSNHARQEITFRCKNSVAWFD
QSSQNFNKAVKFEGASGHEFSTKSKSKKAMVTVPFDGCQVKDGSLRDTQFVISTSQASRL
PIVDFASYDLAGEIEVEVGQVCFW
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggggttctttgactctaaaatagcgttggctgtttatctcgcactatggatctgcaaa
acacatgctcagcacggcggaatgggtgatgttataccaatacaaattgatccggcgtta
aaaggagaccaaggagatccaggaaacaaaggacgaggtggactaccagggcctcctgga
ccaagaggtggtcaaggtgaaccaggagttaatggacctgatggacctccaggaccccga
ggtccaaatggaccgcaaggacccattggcccacctggtccccctggtaatcccttggtc
atcaccattggtattcctggagctccgggaaaacgtggggatagaggtcccgctggaaga
gatggccctgcgggtctgcctggagaacctggaagcccgggagcaccaggaatgcgtgga
ttacctggacctccaggagcccccggtgatgcagggcagcctggtcggcctggacaaaat
ggaacagtcggtcaacctggattgcgaggccctgttggaccacccggttcaccagggagc
actggacctaatggtgaaaagggtgctgatggtgctaaaggcgacaggggaagaatggga
ctgaaaggaccgaagggtcttaggggagcacagggccgcaagggtgatcagggtattgct
ggtgcggatggaagaaacggaacaaatggattacctggtgatcggggtgagactggtcct
gatggtcccccgggtccctcgggtgttatgggacaaaatggacaaggaggaattcgtgga
caaccgggaccccctggtgtgccaggacccactggagtaccaggatctcctggtgagaaa
ggatccacaggggacccaggagtagcaggagaacaaggaaaacagggtttgcaaggaaga
agaggtgggcaaggccctcagggagatcctggtactgatggaaatcctggcagtgatggt
tctgaaggccaaaagggagcacagggtgacccaggtccaatgggtccgcaaggattgcca
ggtgctccgggacgtccgggaaaagctggggaagatggatctgtaggaccatctggtgca
cagggtgattctgggccaaatggccctccaggactaccagggcagactgggacaagggga
gatcagggtccacctggtgctcctgggccaaaaggtccttctggaagacaaggaagacga
ggcaagactggtcggcttggagctactggagaacaaggaccccccggggaacaaggacct
cggggtgcagtaggagcagctggaatccctggcaccgatggaagacgaggtgaacctgga
cacaatggcaacgatggagtgaagggagaaaggggacctgatggaattcctggagaagat
ggaatacctggtccaaggggtcctcctggcccccctggttctcctggaggtgatggcaaa
aatggagataagggagctaaaggaaaagatggcgagccaggaaaatcagggccaccggga
cctccaggacctccgggtagtgttggaatgactggaaagaaaggagagctgggtgcattt
ggtaaaccaggtgctgcaggcccgcctggacccaaaggacctcagggagctcgtggagac
tttggagaacgtggtgaaactggacaaccaggaactgatggtgcacctggccaaagaggc
ctacctggtcctgtcggcattccgggtctcatgggatcccagggagagcctggggctcct
gggtcaccaggtccagacggaaagaagggcccacctggtgaaagaggacgggatggactt
ccaggagaccctggaccagttggacctcaaggagagctcggcccacaaggggaatcaggc
atcaaaggtgaaaaaggaaggccaggagagaatggtgcagatggaacccctggtgagcgt
ggtgaaagaggaccgcaaggagcacagggcaatgctggagcatcaggtcctcctggactt
ccaggttccccaggtcctgtcggaaacaagggagatccaggtgatcccggcccccctgga
ccacgaggaaatccgggaagagatggcaaaagaggttatgctggtactcctgggtcacct
ggagcacagggagaaacaggaccaagaggaacccctggactgtttggaacacctggtgtc
cctggagatgctggtctttctggtccccgtggacctcaaggtcccccaggcccttccgga
gagaatggagcagatggtgcaagtggcccacccggtgcaccagggcttatgggagaccaa
ggagagcagggtgctcccggagacatgggtgaagttggaccagagggtgatgtggggcct
attggacctcaaggaccacctggaactgtaggagctcctggtatcatgggagctattggt
gtggccggacctccaggtgataatggagcccctggaccaatcggtttacccggacccatg
gggcctcccggtcaagacggagaaagaggattggatggagctaagggtgaccccggtgaa
tctggggcagatggcaagagaggtctgaccggacagcccggcttggatggaagacctggg
ctgcgaggaaaacaaggagaggctggcaaacgaggacccccaggcccacccggaccacct
ggaccgagaggagacgcaggcccaccaggaagcaatggtgcgacaggaccccaggggtct
gcgggccgcaatggaccaaggggacagcctggagctggtggtgaacctggaagcgatggc
cccccaggacagcccggaccagatggaccacctggttctcctggaaaacctggattccgt
ggccaagacggcacaccgggtctaccaggcactcctggtaccccaggggcaagaggcaaa
aagggtgcaaaaggattccctggcacgactggaacggatggcgcaccaggaccgcgtgga
ggggctggaccgagaggtccttctggtaacagaggaccgaaaggaaaggagggtatctca
ggcgaagatggtggcaatggtgaacggggacttgtaggagatactggggaagaaggtgct
aaaggtgtacgcggagcgcaaggagacagaggagaaaagggtacgcgaggtcttcccgga
tcgcttggtcgtcaggggttaccaggcagagtgggaccaacaggtgaaccaggatacaat
ggcgctgcaggaccccagggatcaaagggtaatccgggtcccatgggcgaagttggtcca
gatggattcactggtttgccgggtgcgaccggcgataagggtttgaaaggccgaccgggt
acacgcggctttgcgggagctccaggcagagtgggaccaccaggaccccccggacctcgt
ggtgcagacggctatcctgccgcagccctagaacgcatatcgcgcgctggcccaagcaaa
ggaccctctggaggcggcggcggcccacccgctcctgaacctgggccaggaccccttgag
gaggaaagcgaacgattcaacaggaaacgacgatcagttgacgtggaaatgcagatcgca
gaccgtgttgcataccttgccgaaaagatgttcctactagagcgcagagccaattcatcc
ttgtttcctgcaaagacctgccgagatctcaagatttgtcatcctggttcgccactcagt
aatggtaactatcgtattgatcctaatggtggctcatctgaagaccagttcatggctttt
tgcaattttaccactaaagcaacgtgcgttagacctaaagtgaaaaagcttgacaaggat
acatggaaaacacctgttgatccccgaatgaaggtcgcttggttcgcggaagatttgaac
aacgatgtcaagattgaatacgaaatcgacgaggtccaactttcatatctacaacttctc
agcaaccacgcccggcaagaaataaccttcagatgtaaaaactcggtagcctggtttgac
caaagctcccaaaacttcaacaaagcagtcaagttcgaaggcgccagtgggcacgaattt
agcaccaaatccaagtcgaagaaagccatggtgacagttccatttgatggctgccaggtt
aaggacggatcattgcgtgacactcaatttgtgataagcaccagtcaagcctctaggctt
ccaattgtggactttgcctcttatgacttggccggagaaattgaagttgaagtgggccaa
gtttgtttttggtga
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