Montipora foliosa: 137968216
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Entry
137968216 CDS
T10576
Name
(RefSeq) collagen alpha-2(I) chain-like
KO
K06236
collagen type I alpha
Organism
mfoo Montipora foliosa
Pathway
mfoo04512
ECM-receptor interaction
mfoo04518
Integrin signaling
mfoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137968216
04518 Integrin signaling
137968216
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137968216
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mfoo00536
]
137968216
Glycosaminoglycan binding proteins [BR:
mfoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137968216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
COLFI
VWA_2
Motif
Other DBs
NCBI-GeneID:
137968216
NCBI-ProteinID:
XP_068670935
LinkDB
All DBs
Position
8:complement(7478355..7641516)
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AA seq
1808 aa
AA seq
DB search
MPDSLTIYAQDEGGGGLDVVGGGGEGGEERDAQDEGGGGGGGGGEGVCDKNFDLTFIIDG
SGSIEDAGEGNFKLVRNFVKEIIGGFNVGLSTTRVGLVIFSDTKHLTKVFSLDTFSDKAK
MYEAIDEAVYPRGATFTGMAIELVRKQIYTDTQDRPDFPNVCIIITDGYADDDIAEPAKR
LRTGTTIFAVGVGQNFNKQELITMTGNKSHVYTADFDKLKDIITEIKESACRVCYKNFDL
SFIIDGSWSIGKENFELVKDFVKEIIGRFNVGFLTTHVGSVIFSDKTHQRKVFSLDTYYD
EAQMNEAIDKERHPGGATYTGKAMDLVRTEIYTSPQDRPHVPNVCIIITDGKANDDIVKP
SERLRRTGTTIFAVGVGQNFNKSELIKMAGNESHVYTADFDKLQDIITEIKESSCRADQP
VLPPRRVGPPGDRGPKGEKGEPGLPGRNGSLGARGISGSPGADGPKGPKGDVGPPGLPGL
PGPILTLPPGGGPGGEGPDPIIGDEIRSQDSKGPSGSIRQIKGPPGDSGPPGRAGLPGNR
GPEGLRGETGETGLVGATGDPGLQGNTGPRGEFGRNGADGIPGSPGEAGEPGLAGEPGRQ
GVAGMRGLRGFKGDRGSQGDRGDPGDEGAAGETGSPGQNGRPGIDGAQGPVGIRGPQGEP
GDAGPIGLQGPEGAPGAEGAAGISGEPGNTGSNGAPGAKGERGNQGSPGPRGQPGIVGFE
GSKGEKGAAGDTGRPGFDGRAGYKGDAGSPGAMGTPGDAGKDGAPGNPGQPGPPGRTGDG
GAPGRAGERGSDGEKGATGNRGNVGAPGSRGMQGRRGKQGKEGARGKVGEPGPQGSQGDR
GFRGAGGRPGEAGAQGAQGADGIPGVKGDQGSPGAVGDPGRPGVRGTPGPPGSVGKAGSV
GVQGYPGDDGRPGASGSPGAPGSQGVMGFSGAKGAEGAQGRDGAPGEQGPRGTKGNRGER
GEQGKSGTPGREGRTGERGEAGPPGVIGLQGAPGPTGATGVPGRPGSQGVRGERGNDGRP
GEVGLRGPVGEVGVQGEQGPVGTAGEDGADGVDGIAGDKGPEGKRGESGPSGSPGFSGLP
GRPGSTGPKGQRGSRGPMGSPGSDGKDGEPGSDGVPGSTGSPGFPGPKGQDGGAGMPGRR
GQRGDLGPRGAPGAPGITGQPGVTGGAGPRGEDGAKGFPGEKGLKGDSGDFGSKGAPGGL
GSEGIEGTKGDSGSTGFAGSRGPPGSLGRSGAQGPPGPTGPMGSDGQPGLPGVKGARGAP
GKSGLPGLPGLPGVSGRDAAPGIAGSEGRPGSIGQSGPVGPKGDLGRQGMPGDAGRVGDP
GVDGETGDQGEPGLNGSDGETGKQGYPGPSGKPGEDGLKGQPGADGPDGAEGSAGVPGGE
GSRGERGSPGSNGATGVSGSPGPSGERGEPGIFGESGDRGLDGNVGKRGPRGSDGPKGVE
GGQGDAGSVGQKGDTGFTGKPGKVGPDGLQGETGPTGNNGSTGPPGPQGSPGNQGLPGLQ
GDPGSEGMRGVGGDPGASGERGTPGEEGMIGDPGPPGLPGPQGPPGKYLINEDLFGSSDK
GPPPNYRLYSSSKRGFSQESSQSTPILEIPVMKTILDSLETRTFNFKRQNGTRHHPARSC
RDLQLDSNSTVKSGYFWIDPNEGCISDAEYVYCDFENKKTCVQPKKENISSDEAQSWQWL
SEVNPDVQIIQYKMDPAQMKFLRLLSMRLTQTITYHCYNSRAWEEEVGRTIKLQGDNEME
LTSSEKTKPKVITNNCDNKDSSWHQTILEIDTKQKNALPVVDVAAYDVGDKFVEQKFTIQ
LGPVCFVY
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgccagacagtctgacaatatacgcccaagacgaaggtggcggtggactagatgtcgtt
ggcggaggcggtgaaggaggtgaagaacgagacgcccaagacgaaggtggcggtggaggc
ggcggaggcggtgaaggagtttgcgacaagaattttgacctgacttttattattgatggc
agtgggagtattgaggacgcaggagaagggaactttaagctggttagaaattttgtgaaa
gaaataattgggggattcaacgttgggctttcaactacacgtgtaggattagtcatcttt
tctgatacaaaacatctgacaaaggtgttcagtttggatactttttctgacaaagcaaaa
atgtatgaggcgatcgatgaggcggtgtatcctagaggagcaacctttacggggatggcc
atagagttggtcaggaaacagatttacactgatacccaggatagaccagactttcccaat
gtttgtatcatcatcacggatggatatgccgacgatgacatcgcagagccagcaaagaga
cttaggacaggaaccaccatctttgccgtaggagtaggacaaaactttaacaagcaggag
ttaatcacgatgaccggtaataaaagtcatgtttacacagccgattttgacaaactgaaa
gacatcatcacagaaataaaagagtcagcttgtagagtttgctacaagaattttgacctg
tcttttattattgatggcagttggagtataggaaaggagaactttgagctggttaaagat
tttgtgaaagaaataattgggagattcaacgttgggtttttaactacccatgtaggatca
gtcatcttttctgataaaacacatcagagaaaggtgttcagtttggatacttattatgac
gaagcacaaatgaatgaggcgatcgataaagagaggcatcctggaggagcaacctatacg
gggaaggccatggatttggtcaggacagagatttacacttctccccaggatagaccacac
gtacccaatgtttgtatcatcatcacagatggaaaagccaacgatgacatcgtaaagcca
tcagagagacttagaagaacaggaaccaccatctttgccgtaggagtaggacaaaacttt
aacaagtcggagttaatcaagatggccggtaatgaaagtcatgtttacacagccgatttt
gacaaactgcaagacatcatcacagaaataaaagagtcatcttgtagagctgaccaacct
gtgctacctccacgaagagttggaccgcccggagaccgtggcccaaagggagaaaagggg
gagccaggattacctggacggaatggttctttaggcgctcgagggatatcgggttctcca
ggtgccgatggtccaaagggaccgaagggtgatgtgggacctccagggctaccaggtctc
ccaggtcctattttgacgttgccccccggtggaggacctggaggggaaggccctgatccg
atcatcggcgacgagattcgctctcaggattccaaaggaccttcgggatcgattcggcaa
attaaaggaccacctggagattctggtcctccaggaagagcaggtttgcctggtaatcga
ggaccagagggacttcgcggcgaaacaggggagacgggtctagttggagctactggagac
ccaggtctccaaggtaacacgggaccacgaggagaatttggtcggaatggagcagatggt
ataccggggagtcccggagaggcaggagaacctggacttgcaggagaaccgggtaggcag
ggggtcgcaggcatgcggggtcttcgaggcttcaaaggagaccgcggatctcaaggtgat
cgcggagatcctggtgacgaaggtgcagcaggtgaaacggggagcccaggacaaaatggt
agacccggtattgacggagcacaaggaccagttggaattcgggggccacagggagagcct
ggtgatgctggaccaattggacttcaaggtcctgagggcgctccaggagctgaaggagct
gcaggtatctcaggtgaaccgggaaatactggcagtaatggagcccctggggcaaaggga
gaaaggggcaatcagggctctcctggtccacgaggacagccaggtattgttggttttgaa
ggttcaaaaggagaaaaaggagccgctggagacacgggacgacctgggtttgatggacga
gcgggctacaagggtgatgcaggttctcctggagcaatgggtaccccgggagatgctgga
aaagatggagcaccaggaaatcctggtcagcctgggccaccgggacgcacaggagatggg
ggagccccaggacgagcaggagaacgaggctcagatggtgaaaagggagcgactgggaac
cgagggaatgtgggagcacctggaagtcgcggaatgcaaggaaggaggggtaagcaggga
aaagaaggcgctcgaggaaaagtcggagaacccggtccacagggctctcaaggggatagg
ggatttcgcggtgctggaggaagacctggtgaagcgggagcccaaggtgcccagggtgct
gacgggataccaggtgtgaaaggagatcagggaagtccaggtgccgttggtgacccagga
agacctggagtgaggggaacccctggtccacccggaagcgtaggaaaagcgggtagtgta
ggagtacaggggtatcctggagatgatggtcgaccaggtgcttctggatcgcctggagct
ccaggctcacaaggtgtaatgggattcagtggcgcgaaaggagcagaaggagcccaaggc
cgcgatggtgctccaggagaacagggacctcgtggaacaaagggcaacagaggggaaaga
ggcgaacaaggaaaatctggtaccccaggaagggagggccgtactggtgaaagaggagaa
gctggtcctcctggagtgataggtcttcagggagccccaggccctactggtgccacgggt
gtacctggtcgcccaggaagtcagggtgtacggggagaaagaggaaatgatggaagacca
ggagaagttggtctccgcggacctgttggagaagttggagttcaaggagaacagggtcca
gttggaacagctggcgaagacggagcagatggagtggacggaattgcaggagacaaggga
cccgaaggaaaaagaggggaaagtggcccgtcagggtctccgggtttctcgggacttccc
ggtcgacctggcagtacgggtcccaagggacagcggggaagccgtggacccatgggaagt
cctggatctgatgggaaagatggagaaccgggttcagatggcgtacctggtagcactggc
tcccctggattccctggaccaaagggtcaagatggtggtgccggaatgcccggaaggcgc
ggtcaacgtggcgatctgggacctcgtggggcaccaggcgcaccgggtattactggacag
cccggagtaacaggaggggctggaccacgcggagaagacggggccaaaggatttcctgga
gagaagggattgaaaggcgactctggagattttggtagcaagggagctcctggaggcttg
ggatctgaaggcatcgagggaaccaaaggagacagtggctccaccggattcgcaggttcg
agagggccccccggatcacttggacgatcaggagcccaaggaccccccggccctactgga
ccgatgggaagcgatggacagcctggacttcccggtgttaagggtgcacgcggagctcca
ggaaaaagtggcctacctggattgcctggacttccgggcgtttccggaagagacgccgca
ccgggcattgcgggcagcgaaggacgtccaggaagtattgggcaatcgggtccagttggt
ccaaaaggggaccttggacggcagggtatgcctggagacgcagggcgtgtgggagatcct
ggtgtcgatggagaaacgggtgatcagggagagccaggactaaatggctcagacggagaa
accggaaaacagggttaccctggtccttctggcaaaccaggagaggacggactaaaaggt
caaccgggcgccgatggtccagacggagccgaaggttcggccggagtgcctggaggagaa
ggttcccggggagagagaggatctcccggcagcaacggcgcaaccggagtttccggatct
cccggcccttccggagagcggggtgaacccggcattttcggcgaaagtggtgatcgtggc
ctggatggtaatgttggaaaaagaggacctcgaggttcagatggtcccaaaggggtagaa
ggaggccaaggtgacgcaggaagtgtaggacaaaagggagacaccggctttaccggaaaa
cctggcaaggtgggacctgatggtcttcagggagagactggcccgacgggtaacaacggt
tccacaggtccaccaggcccacagggctctccaggaaatcaaggattgcctggtctacaa
ggcgacccaggatcagagggaatgagaggagtgggaggcgatcccggtgcgtcgggtgag
agaggaacgccgggtgaagaggggatgataggagatccaggaccccccggactcccaggc
cctcagggtccccctgggaaatatctcataaatgaagacctgtttggcagttcagacaag
ggcccgccgccaaattatcgattatattccagttcaaagagaggtttctctcaagagagt
tcacagagcactcctattttagagatacctgttatgaaaacgatcttggactctctcgaa
actcggacatttaatttcaagcgacaaaatggaactaggcaccacccagctcgatcctgc
agagatttgcagctcgacagtaattccacggtgaaaagcggatatttttggatcgacccc
aatgagggctgcatcagtgacgcggaatacgtgtactgtgattttgagaacaagaagacc
tgtgtgcaacccaagaaagaaaacatctcaagtgatgaagcacagtcttggcagtggctc
agtgaggtgaacccagatgtccagattattcagtacaagatggatcctgcgcagatgaaa
ttccttcggcttctgagcatgcgccttacgcagactatcacgtatcactgctacaactcc
cgcgcatgggaagaagaagttggccgtaccatcaagctccaaggggacaacgaaatggaa
ctgacttcatcggagaaaactaaaccaaaagttatcacaaacaactgcgataataaagac
agttcgtggcatcagacaatcctcgagattgacaccaaacaaaagaacgcgctgcctgtc
gtggacgtcgcagcttatgatgtcggagacaagtttgttgagcaaaaattcactatccag
ctaggccccgtatgcttcgtgtactag
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integrated database retrieval system