Montipora foliosa: 137969925
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Entry
137969925 CDS
T10576
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
mfoo Montipora foliosa
Pathway
mfoo03013
Nucleocytoplasmic transport
mfoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137969925
09122 Translation
03013 Nucleocytoplasmic transport
137969925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
137969925
03041 Spliceosome [BR:
mfoo03041
]
137969925
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137969925
Spliceosome [BR:
mfoo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137969925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR3_2nd
WD40_Gbeta
DSE1_N
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
TRM82_WD
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_VPS8
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
137969925
NCBI-ProteinID:
XP_068672434
LinkDB
All DBs
Position
9:10983025..10996977
Genome browser
AA seq
339 aa
AA seq
DB search
MAAERKDQIFKRRMELHTTVFATAFSPCGNFLAACNNFGHIAVFSVVAALAPDATSHNKR
PLILFQGHSGPIYSLISIDRFLISGGSSEIHGWRWDEILDKTECPSPAWTLKPPASNSLD
IPETNALVFASQEETLFSGCGDSNIYMWDLESGTCKGALTGHTDYVQCLSLRPKQSQCVS
GAEDGTVRLWDYRLKGSMTDMIQPCKNEDIQRPHVGSWIGCVAIDHTGDWLVCGGGPSLS
MWHLRTMTCTSVLQTSSVQQAAVFHDDLILSAGSEPSIFHWQLNGDLKSQVPCTPNSVFA
IEVNDKSPTNKVLVVGGSSANIDVFTNFGYKALSLRFSQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgagcgtaaggatcagatctttaaaagacggatggaacttcacacaacggtg
tttgctacggccttttcgccttgtggtaactttctagcagcgtgtaacaactttggacac
atcgctgtttttagtgttgttgctgctctggcaccagatgcaacttcacataacaaaaga
ccattgatacttttccaaggtcatagtggtccaatttacagtcttatatctatagacagg
tttcttatcagtggaggatcctctgaaattcatggatggaggtgggatgaaattcttgat
aaaacagagtgtccatcaccagcttggacgttaaaacctcctgccagcaattcccttgac
ataccagaaaccaatgcattagtatttgctagtcaggaagagacattgttctccggttgt
ggagatagcaatatttatatgtgggaccttgagtcgggaacttgcaagggtgctcttact
ggtcatacagattatgttcagtgcttaagtctgagaccaaagcaaagtcagtgtgtgagt
ggagcagaagatggaactgtgagattgtgggattacagattgaaaggatcaatgactgac
atgatacagccatgcaaaaatgaggacattcaaagaccgcatgtaggctcttggattggg
tgtgttgccattgaccacacaggagattggctagtttgtggtggtggtccctcgctgtct
atgtggcatttgcggaccatgacttgtacaagtgttctacaaacatcatccgtgcaacaa
gcagctgtcttccatgatgaccttatactttcagctggttcagagccatccatctttcat
tggcagttaaatggtgacctaaaatcacaagtaccttgcactccaaactctgtgtttgca
atcgaagtaaatgacaagtctccaacaaataaggttcttgtggttggtggaagttcagct
aatattgatgtctttacaaactttggttacaaagcactttctctaagattttctcaatga
DBGET
integrated database retrieval system
