Montipora foliosa: 137973925
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Entry
137973925 CDS
T10576
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
mfoo Montipora foliosa
Pathway
mfoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137973925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
137973925
Enzymes [BR:
mfoo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
137973925
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
137973925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
DUF7349
Motif
Other DBs
NCBI-GeneID:
137973925
NCBI-ProteinID:
XP_068676926
LinkDB
All DBs
Position
1:complement(1115936..1137062)
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AA seq
542 aa
AA seq
DB search
MVEVVWNNFEDLFPEIKSVIEKSVFVAIDTEFTGLYTTDASQPSLFDDPETRYKKLKKTA
SQFLISQFGLTAFVQLEEDPNKYIAHAFNFFLYPHSFGPIDCRFLSQASSLEFLCQHNFD
FNKFIYSGVPYLNEDQATLLCKYHQNGDLYTSFQSQTLRIIDENIVDSCANLEEWLLSAQ
DGDEIELRPGSCQAQYLFLEELKRRFTGIKCRVLNQSKLTVTKLPTVNGCNPDGNSDHLS
QEQEKTLQAMVGFSRIFQVLTACKKPLVGHNVLTDLMLTYEKFYKPLPESFKDFKLEISK
LFPLIYDTKFIAFEMRKNPALSQCNFFDDTNLEKLHAALSSNDAQFFALFAPSIPLDEKC
FRYLEEKLSHEAGYDSFLSGFVFLRMAHILAFKSSKRRIEGPVPFSKFLRVLKQFENLVQ
LSRATVQHVNLCGPDPPSIRPQWLYVSSKLKIKPLVARTLAQEFAAFGSVDVKILDSQHA
LVAVAQHRKAKDVLQSFRRHKLLNIRPYNSFLDSSELKVACWCCGTALVLSGAAIFLWKS
LR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggttgaggttgtgtggaacaattttgaggatcttttccctgagatcaaaagcgtaatc
gagaagagtgtttttgtggctattgacacagaatttactggcctttatacaacagatgct
tctcaaccaagcctgtttgatgatccagaaacacgctacaagaaactaaagaaaactgcc
tcccagttccttattagccagtttggattaacagcttttgttcagttggaagaagatccc
aacaaatacattgctcatgcattcaatttctttttatatcctcattcttttgggcccata
gattgcagatttcttagtcaggcctctagcctggagtttttgtgccagcataactttgat
tttaacaagttcatatacagtggagttccttatctgaatgaagaccaggctactctgctc
tgcaaatatcatcaaaatggtgatttgtacacaagtttccagtcccaaactttgaggata
atagatgagaatattgtagacagttgtgcgaatttagaagaatggcttttgtctgcacaa
gatggagatgaaattgagttacgtcctggcagttgtcaagctcaatatctttttctcgaa
gaactgaaaagaaggtttacaggaataaagtgtcgtgttttgaaccagtccaagttgact
gtaacaaaattacccacagttaatggatgtaatccagatggtaacagtgatcatctctct
caagaacaagagaaaacattgcaagccatggttggtttttcaagaatttttcaagtttta
actgcttgcaaaaagccacttgtaggacacaatgttttaacagacttgatgctgacttac
gaaaagttttacaaacctttaccagaaagtttcaaagacttcaaattggaaatcagcaag
ctattcccattgatatatgacacaaagttcatcgcctttgaaatgcgaaaaaatccggct
ttatcacaatgcaatttctttgacgatacaaacttagaaaaacttcatgctgcattatca
agcaacgatgctcagttctttgcgctatttgcgccctcaattccgttggacgaaaaatgc
ttcagataccttgaagagaagctatctcacgaggcaggctatgactccttcctttccggt
tttgtgtttctaaggatggcgcacattctggccttcaaatcatcaaaaaggagaatagaa
gggcctgtccccttttcaaaattccttcgcgttctgaagcaattcgagaatctcgttcaa
ctgagcagagcaaccgtccagcacgtgaatctttgtggccccgaccctccctccattcgt
ccgcaatggctttacgtctcgtccaagcttaaaatcaaacctcttgttgcgaggacgtta
gctcaagaattcgctgcctttggttctgtggacgtgaaaattttggactcgcagcatgcg
cttgtcgctgtcgctcaacaccgaaaagccaaagatgttttgcaatcattcagacgccac
aagttgctgaatattcggccttacaactcgtttttagattcgtccgaacttaaagtagcg
tgttggtgttgtggaaccgctttggttctgtcaggtgccgcaatatttttgtggaaatca
ttgagatag
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