Entry |
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Name |
(RefSeq) exosome RNA helicase MTR4-like
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KO |
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Organism |
mfoo Montipora foliosa
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Pathway |
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Brite |
Enzymes [BR:mfoo01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137973931
Messenger RNA biogenesis [BR:mfoo03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
137973931
Spliceosome [BR:mfoo03041]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
137973931
Complex C
U4/U6.U5 tri-SnRNP related factors
137973931
Ribosome biogenesis [BR:mfoo03009]
Eukaryotic type
Pre-60S particles
Helicases
137973931
Transfer RNA biogenesis [BR:mfoo03016]
Eukaryotic type
tRNA degradation factors
TRAMP complex
137973931
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SSDB |
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Other DBs |
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LinkDB |
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Position |
10:19870797..19916958
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AA seq |
1028 aa
MADAFGEEDIFSVFEENSSSNSSKKKQNDKRDTNDPSASDVSADITQVGEKRQFKPDVID
LALDETGTKKAKFDDLESLLESIPRVNVMNVETIEACTHEVAVPEGCEYVPLVKKSIKQA
KEYPFILDPFQKESLKCLENNQSVLVSAHTSAGKTVVAEYAIALSLQNKQRVIYTTPIKA
LSNQKYRELYEEFQDVGLMTGDVTINPSASALVMTTEILRNMLYRGSEVMREVAWVVFDE
IHYMRDKERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWIAHLHKQPCHVVYTDFRP
TPLQHYIYPSGGDGLFLVQDEKGDFREENFQKAMAVIREGGTEPGPQRGRKGGTKGPSSC
FKIVKMIMERNFQPVIIFSFSKKECEAYALQMSKLEFNSAHEKKLVEEVFNNAIDCLSDE
DKKLPQVEHVLPLLKRGIGIHHSGLLPILKETIEILFSEGLIKALFATETFALGLNMPAR
TVVFTNARKFDGKDFRFITSGEYIQMSGRAGRRGIDDRGIVILIIDEKMGPDVGKALLKG
NADPLNSAFHLTYNMVLNLLRVEEVNPEIMLEKSFYQFQNYAAVPGMIDKLKALEVKRDA
FKIPNEESVTSYYKIRQQLKKLGNDMLGFIHQPKYCLPYMQPGRLIQVKNNDTDFGWGVV
LNFQKKANQKSGPSQGETLFVIEALLNCSSKSVKSADGDKPQPCGPDEKGEMQVVPILLH
LVQAISSVRLYIPKDLRSLDSRQSVGKSVKEVKRRFPDGLPLLDPVEDMGIKDDGLKTVV
RKIEMLEHRMYIHPLHKDPSLESLYGQYEQKAKINAEIKSVKKELRRTRTVLQLDELKSR
KRVLRRLGYATAADVIELKGRVACELSSGDELLLTEMIFNGVFNDLSVQQCVALLSCFVF
EEKSDELPKLTEELAGPLRQMQESARRIGKVSEEAKLEIDVETYVESFKPHIMDVVFAWA
NGASFSQICKMTDAFEGSVIRCMRRLEELLRQMCQASKAIGNTELENKFAEGIIKIKRDI
IFAASLYL |
NT seq |
3087 nt +upstreamnt +downstreamnt
atggcggatgcttttggagaagaagatatcttttctgttttcgaggaaaattcatcatca
aatagcagcaaaaagaaacaaaatgataagagagataccaatgatccatctgcatctgat
gtctcggcagatattacacaggtcggagagaaaaggcagtttaaacctgatgttatcgat
ctcgcactggatgaaactgggacgaagaaagcaaagttcgacgacttagagagcctcttg
gaatcaatacctcgggtaaatgtaatgaatgtcgagaccatagaggcttgtactcatgag
gttgctgttcctgagggatgtgaatatgtgccattagtcaaaaaatcaataaaacaagca
aaggaataccctttcatcttggatcctttccagaaagaatcactgaaatgcttggaaaac
aatcagtctgtgttggtgtcagcgcacacatcggcagggaaaacagttgtagcagagtat
gccatcgccttgtcactgcagaataaacaaagggtgatctacactacgcctatcaaggct
ctaagtaatcaaaaatacagggaattgtatgaagaattccaggacgttggcctaatgact
ggagatgtgaccatcaaccctagcgctagtgctcttgttatgacaacggagattttacga
aacatgctttacagaggttctgaggtaatgagagaagtagcttgggttgtgtttgatgaa
attcactacatgagagataaagagaggggtgttgtgtgggaagaaacaattatcctccta
ccagacaatgttcattacgtgtttttatctgccacaattccaaatgccagacaatttgca
gagtggattgctcatcttcataaacagccttgtcacgttgtctatacagattttcgaccc
actcctcttcagcattacatttatccttctggtggtgatggattgtttctggtgcaagat
gagaagggtgattttcgggaagaaaatttccagaaggcaatggctgttatacgagaagga
ggaacagagcctgggccccagagaggaaggaagggagggacaaaaggtccttcaagctgt
tttaaaatagtgaaaatgataatggaaaggaattttcaaccagtgattatcttcagcttc
agcaagaaagaatgtgaagcatatgctctgcaaatgtcaaaacttgaattcaattcagct
catgagaaaaaacttgtggaagaagtgttcaataatgctattgactgtttatcagatgaa
gacaaaaaactccctcaggtagaacatgtccttcccttgttgaaacgtggcattggcatc
catcactctggactgctgccgattttaaaggagaccattgaaatccttttttcagaaggt
ttgatcaaggctctctttgccacagaaacatttgctcttggtctcaacatgcctgccagg
acagttgtgttcacaaatgctaggaaatttgatggaaaagatttcagatttataacttca
ggagagtacattcaaatgagtggcagagctggaaggcgtggtattgatgacagaggaatt
gttattttaatcatagatgagaaaatgggtcctgatgtaggaaaagctttgctaaagggt
aacgctgatcctctgaacagtgcattccatcttacttacaacatggtgttgaacttgctg
cgtgtggaagaagtgaacccggaaattatgttggaaaagtcattttatcagtttcagaac
tatgcagcagtgcctggaatgattgacaaactgaaagctcttgaggtcaagagagatgca
tttaaaatcccaaatgaagaatccgtcacatcatattataagatcagacaacagctgaaa
aaactgggcaatgatatgttgggttttatacatcaacccaagtactgtttgccttacatg
cagccgggaagactaattcaagtgaaaaataatgacactgattttggttggggtgttgtt
ctcaactttcaaaagaaggcaaaccaaaagagtggaccaagccaaggagagacattgttt
gtgatagaggccttgttaaactgctctagcaaatcagttaaatcagctgatggagacaaa
ccacagccatgtggtcctgatgaaaaaggagaaatgcaggttgttccaatcttgctacat
ctggttcaagccataagcagtgtgagattatacattcctaaagacttgagatcactggac
agcagacaaagtgtaggcaaatcagttaaggaagtaaaacgtcgattcccagatggcctt
cccctgctggatccagttgaggatatgggaataaaagatgatggattaaaaacagttgtt
aggaaaatagaaatgttggaacatcgcatgtacattcatccgttacataaggatccttca
ttggagtcgttgtatggccaatatgaacaaaaggcaaagataaatgctgaaatcaagtca
gtgaaaaaagaactgagaagaacaaggacggttcttcagctggatgaactcaagagcaga
aagcgagttctcagaagattgggatacgcaactgctgctgatgttattgagttaaaaggg
cgtgtagcttgcgagctgagcagtggcgatgagctgcttttaacagagatgatattcaat
ggtgtcttcaatgatctctcggtacagcagtgtgtggctttactgagctgttttgtgttt
gaggaaaagagtgatgaattgcccaaacttactgaggagttagcaggtccactgaggcag
atgcaggagtcggcccgtcggattggaaaagtatcagaggaagcaaagctcgagattgac
gttgaaacttatgtggagtccttcaagccccatatcatggatgttgtatttgcatgggca
aatggggcatcattttcccaaatctgtaaaatgaccgatgcatttgaaggaagcgtaatt
aggtgtatgcgtcgtctagaggagcttttaaggcaaatgtgccaagcttccaaggccatt
ggaaatacagagctggaaaataaatttgctgaaggaattatcaagattaaacgagacatc
atatttgctgctagcctgtatctctaa |