Montipora foliosa: 137974861
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Entry
137974861 CDS
T10576
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
mfoo Montipora foliosa
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfoo03021
]
137974861
03036 Chromosome and associated proteins [BR:
mfoo03036
]
137974861
Transcription machinery [BR:
mfoo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
137974861
Chromosome and associated proteins [BR:
mfoo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
137974861
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
S1
HHH_3
SH2
Spt6_S1
HHH_9
Tex_N
Tex_YqgF
S1_RRP5
YPP1_N
Zn_ribbon_RanBP
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
137974861
NCBI-ProteinID:
XP_068677956
LinkDB
All DBs
Position
11:49292512..49331862
Genome browser
AA seq
1633 aa
AA seq
DB search
MSNFGDSEAEEDSLDESLSNKSEDDEEEEEEKDDANDIINDEEEESGGEEEEAHHGHHHK
RPRKDEDELDEEDLSLIEENLGIRLQRKKPRLKKVKLLDSDDDEEDQGAGNSAATDREAI
ANELFEGAEDSAEVSSEPPVQPQVDDTYADIDESEESEEDVDDFIVDDDGNPIKHVKKKR
RIPGTVQDSALMEAQDIFGLDFDFDEFEKYGREDYSSGEDEDEYLEEDDEDGVLRRQKKK
SSKKSIYEVFEPSELEKGMLTTKDNEVRTADVPERFQVRDFPVKSTEEGELDDEADWIYR
HAFLEMPISQQQDILDGDMHSRSKPIKPYSAVSKIREALNLMRNQLFEVPFIANYRKEYI
EPELNIDDLWKVWAWDEKWSQLRTRKENLHRLFQEMQDYQFNNIQESGDKPLDDDTRILQ
AEDVDRLDGVESMEQLKDVYSHFMLYYRNDIPAMWEAKRKTKQANEDTADGQSNTTPPKQ
KMPAKRDLYTICRHAGVSGLARKFGLTPDQFGENLRDNYQRHETQQHPVEPEDSAENYLS
STFSTVTQVLEAARHMVAMQIARDPLVRQCVRQTFYERAKLRINPSKKGKKEIDESHACS
PFKYVKHKPIRDLVGDQFLRMCKAEEDGLLTISIGIDLDKNSGYHTYFDEVKQLYYRDEF
SHLVQEWNTQRMNALARAFNQMLYPLFEKELKLKLLEEAKDSVIKACCRRLKSWIEVAPY
QPEQHVDAQEYDDISNSEGLRVLACSISPSPDIPAFLAMLDGGGQVSDYLRLKYLLNRRN
ATRAKEREDKEKDLSTLKQFILKKRPQVIVVAAECREATSVIDDMKMCVAELEQENQIPT
ISVEPLDGEVARVFTSSPRSENEFREYPPLLRHAVSLGRRIQDPLSEFAALCVEEGELLC
LRLHPFQDHVAKEQLVKSLHQEFVTVVNDVGVDPNRLLEHPHTVALLQFVCGLGPRKASS
LLKSLRQQCTRLENRSQLVTVCGLGPQVFLNCAGFIKIDTSAISDSTTNYIEVLDGSRVH
PETYEWAKKMAVDALEYDEATMESNPSSALEEILETPDRLRDLDLDAFAEELERQGYGNK
RITLYDIRDELFGQYRERRLPFRALTVEERFRLLTGETNESLYVGKMVVCGVTGFANRKP
PRDMIDQAQPVRNDETGQWQCPFCLQDNYPDLSEVWTHLDNGSCAGQAVGVRTRMENGLS
GFIPTKMISDKRISSPHERVKVGMTLHCRVTRINMERLQLDLTCRSSDLLDKEGKYSPLK
DKYYDQDAADNDKKEEEAAKKKANRPKYVKRVIVHPAFKNISFKEAERMLAEMDQGECVV
RPSSKGADHLTVTWKVDEGVYQHVDVREEGKENAFSLGRSLWIDSEEFEDLDEIIARHVQ
PMASFAREIQNHKNYRAVDGNKTKLEEVLQAEKRKAPQRIPYLLSTTKEFPGKFFLGYLP
RVKPRVEYISVTPDGFRYRGRVHATLNGLFKWFKEHFRDPIPGTPRQRMPVAMSESNTPY
TPGGTPSINTDVDPARLVPQLQQHFPRGLTDPKVYSALAAVARQRQDSQKKTPTQLTPAQ
WGAAAAQHIQRQNKQRSQQTPTQQQTPTEQGYQQYPQYGYYQQHQDQTQTPTYGYQQTYS
GKKSSSKENSKSR
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatttcggtgacagtgaagcggaggaagactcactggacgaaagtctttcgaat
aaaagcgaggacgacgaagaagaagaggaagagaaagatgatgctaacgacattataaac
gacgaagaagaagaaagtggaggcgaagaagaggaagcccatcatgggcaccatcacaaa
agacctagaaaggatgaagatgaactggatgaagaagatttgtctttgatagaagaaaac
ttgggcatccgtttacaacggaagaagcctcgcttgaaaaaggtcaagttgttggactcg
gacgatgatgaggaggaccaaggagcaggaaattctgctgcgactgacagagaagcaatt
gctaatgagctatttgagggtgccgaagatagtgccgaggtttcctctgagcccccagtt
cagccacaggtagacgacacttacgcagacattgatgaatctgaggaatcagaagaagat
gtggatgactttattgttgatgatgatggaaatcctatcaaacatgtgaagaaaaaaagg
cgaattccaggaactgtgcaagattcagccctcatggaagctcaagatatctttggcctg
gattttgattttgatgaatttgagaagtatggcagagaggactactcatctggtgaagat
gaagacgagtatttagaagaggatgatgaagatggtgtactccgaaggcaaaagaaaaaa
tcctccaagaaatccatttacgaggtttttgaaccaagtgagcttgagaaaggaatgttg
acaactaaagataatgaggtcagaactgcagatgtaccagaaaggtttcaggtgcgtgac
tttccagttaaatcaactgaagagggggaacttgatgatgaggctgattggatttaccgt
catgcctttttggaaatgccgatatcgcagcaacaggatatccttgatggcgacatgcac
tctcgttccaaaccaatcaagccttactctgccgtcagtaagataagagaggcattaaac
ttgatgagaaaccagctctttgaggtgccatttatcgccaattacagaaaggagtacatt
gaacctgaactgaatattgatgacttgtggaaagtgtgggcatgggatgagaagtggagc
cagttgcgaacccgtaaggagaacctccatcgcttgttccaagagatgcaggattatcag
ttcaacaatatccaagagagtggtgacaaacctcttgatgatgacactaggattttgcag
gctgaagatgtagacaggctggatggagtggaaagcatggagcaactcaaagatgtgtac
agccatttcatgctgtactacagaaatgacattcctgccatgtgggaagcaaagagaaaa
acaaaacaagctaacgaagacacagctgatgggcaatcaaacactactccgcctaaacag
aaaatgccagccaaacgtgatctgtataccatttgtagacatgcaggtgttagcggtttg
gccaggaagtttggtttgacaccggatcagtttggcgagaatttgcgtgacaactatcag
aggcatgaaacccagcaacatcctgttgagccagaagactcggctgaaaattacctcagc
agcacattttcaactgtcactcaagttctggaagctgctcgacatatggtggccatgcaa
attgctagggatcctctggttcgccagtgtgtgaggcagacattctatgaaagagccaag
ttaaggataaacccaagcaagaaaggaaagaaggagattgatgagtctcacgcatgcagc
ccgttcaagtatgtaaaacacaaaccaatcagagatcttgttggtgatcagtttttacgt
atgtgtaaagcagaagaagatggattattgaccatttctattggaattgacttggataaa
aattcaggttaccacacctattttgatgaagtcaagcagttatattacagagatgaattc
agccatttggtgcaggaatggaacacacagagaatgaacgctttggctcgagcctttaac
cagatgctttacccactgtttgagaaagaactcaaacttaaactcttagaggaagcaaag
gattctgttattaaggcctgttgccgcagactgaagtcatggattgaagttgctccatat
caacctgaacagcatgttgacgcgcaagaatatgatgacatctcgaactcggagggactt
cgcgtattagcctgttccatttcacccagtcctgacattccagcattccttgccatgtta
gatggtggagggcaagtgagtgactacctcaggctcaaatatctgttgaatagaagaaat
gcaacaagagccaaggaacgtgaagataaggagaaggatctctcgacgttaaagcagttt
attctcaagaagcgtccacaggttattgttgtcgcggctgaatgtcgagaggcaacgtct
gtcatagatgacatgaaaatgtgcgttgcagaactggagcaagaaaatcaaattccaaca
atatcagttgaacctttagatggtgaagtggcgcgtgtttttacgtcttcccctaggtct
gagaatgagtttcgtgagtacccacctcttcttcgtcatgccgtgtcacttggccgaaga
atccaggatccactgtccgagtttgctgctctgtgtgttgaggagggtgaacttttgtgt
ttgaggctgcatccattccaggatcatgtagccaaagagcagcttgttaaatcccttcac
caggaatttgtgactgttgtaaatgacgtaggtgtagatccaaacagactgctggaacat
ccacacactgttgcgctgcttcagtttgtgtgtggcctgggaccgaggaaagcttcgtct
ctactaaagagccttcgccagcagtgcaccaggcttgaaaaccgctctcagctggtcacc
gtgtgtggtctgggtcctcaggtgtttcttaactgcgcagggtttattaagattgacaca
tcagccatcagtgactcgaccaccaattacattgaggtgcttgatggttccagagtgcat
ccagagacttacgagtgggcgaagaaaatggccgttgacgcactagaatacgacgaggca
acaatggagtccaacccgtcgtcagctttagaggaaattcttgaaactcctgacagatta
agagatctggatttagatgcgtttgctgaagagctcgaacgacagggctatggcaataag
cgaattacactgtacgacatccgtgatgagcttttcggtcaataccgtgagcggcgcttg
ccgttccgagcactgacggtggaggaacgatttagactcctgactggcgagacgaatgaa
tcactgtacgttggcaaaatggtggtgtgtggtgttactggatttgccaacagaaagccg
ccgcgtgacatgatagatcaagcgcaaccggtcagaaatgatgagaccggacaatggcag
tgtcctttctgtctgcaagacaactacccagatttaagcgaggtgtggacacatcttgat
aacggaagctgcgcaggtcaggcagtgggtgtgcgcacaagaatggagaatggattgtcg
ggatttattccaaccaagatgattagcgacaagcgtatcagcagtccacatgaaagagtc
aaggtggggatgacgttgcactgccgcgtgacacgtatcaatatggaacgactacagctt
gacctgacgtgccgatcatccgaccttcttgacaaggaaggaaaatacagtcctctgaag
gacaagtattacgatcaagatgcagcagataatgacaaaaaagaagaggaagcggcaaaa
aagaaagcaaacagaccaaaatacgtgaagcgcgtcatcgtccacccagcgtttaagaac
atttcattcaaagaggctgagaggatgttggcggaaatggaccaaggagagtgtgttgtc
agaccaagcagcaagggtgctgatcacctgactgtcacgtggaaggttgatgaaggtgtt
taccaacacgtggatgttcgcgaggagggcaaagaaaacgcttttagtcttgggcgctca
ctatggatcgacagtgaggaattcgaagatcttgatgaaatcattgcgcgtcatgtccaa
ccaatggcttcgttcgcccgagaaattcaaaaccacaagaactatcgggcagtggacgga
aacaagactaaactggaggaagtccttcaagcagagaaacgaaaagcccctcaaagaatt
ccttacttgttgagcacaaccaaggaatttcctgggaagttcttcctggggtatctccca
cgtgttaagccccgagtggagtatatcagtgtaaccccagacggattccgttaccgaggc
agagttcatgccacgttgaatggcctgtttaagtggtttaaggagcatttcagagacccg
atacctgggactcctcgccaacgtatgccagtagcgatgtcagagagtaacacgccctac
actcccgggggcactccgtctattaacacagatgttgacccagcacgacttgtaccacag
ctgcaacagcatttccctcggggattaactgaccctaaggtttactcagcgctcgccgcg
gttgctaggcaacgacaagactcgcaaaagaaaaccccgacgcagcttactcctgcgcaa
tggggagcggccgctgctcagcatatacagcgacaaaataaacagcggtcgcaacaaacg
cccacccaacaacagactccaacagaacagggttaccaacaatatccacagtatggctac
taccaacagcatcaggatcaaacccagaccccaacttatgggtaccagcagacttattct
ggaaagaaatcaagttcaaaggaaaacagcaagagtcggtag
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