Montipora foliosa: 137975019
Help
Entry
137975019 CDS
T10576
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
mfoo Montipora foliosa
Pathway
mfoo03030
DNA replication
mfoo03420
Nucleotide excision repair
mfoo03430
Mismatch repair
mfoo03440
Homologous recombination
mfoo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137975019
03420 Nucleotide excision repair
137975019
03430 Mismatch repair
137975019
03440 Homologous recombination
137975019
03460 Fanconi anemia pathway
137975019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mfoo03000
]
137975019
03032 DNA replication proteins [BR:
mfoo03032
]
137975019
03400 DNA repair and recombination proteins [BR:
mfoo03400
]
137975019
Transcription factors [BR:
mfoo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
137975019
DNA replication proteins [BR:
mfoo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
137975019
DNA repair and recombination proteins [BR:
mfoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
137975019
MMR (mismatch excision repair)
137975019
DSBR (double strand breaks repair)
HR (homologous recombination)
137975019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF1373
SHLD2_OB1
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
137975019
NCBI-ProteinID:
XP_068678153
LinkDB
All DBs
Position
11:19965259..20007780
Genome browser
AA seq
640 aa
AA seq
DB search
MLSEGAIQDILFKAADQHPQRPVFQILGIKKIQAKSNDGAGNDRYRLVVSDGIYLYTSAM
LATQLNDLVTSKQIEVKAVIRLDKYICNIIQETRKVLIVLELSVLKAAHEVMGKIGDPKP
LTTDSKGDQQHQQQPQQNGSGPVQRNVTDDHHQNQPQRGLAGQQSRAGIVGSKQTGGPLR
TGGLASATYGSNQQVFRGGENSKPVYPISSLTPYQNRWTIRARVTSKSSIRTWSNSKGDG
RVFNVDLVDESGEIRATGFNDAVDKFYEILEANKVYYISKCSLRTANKQYSSIKNDYEMY
INNDTMIELCNDPCDLPTIQYNFVSIGDLANFNGNDMVDILGVVINIDDVTQITTRATNR
QMSKRDVTLLDRSEKSVRVTLWGDYAEKFEEHIGNNPVLALKGVKVSEYGGRSLSVLNST
NIMVDPMDLKEAHSLRGWYMNVGKDTAVESMSGLRSDGSVGSGNYKTLLQVKSEQLGMGD
KPDYFTAKATAVFFKKDNCLYKACPSADCNKKVIEEGDGTYRCEKCNKTHPDFKYRLILS
ANLADFSGNQWITCFQETAEAILNTSANQVGQIKDSGDERAYDHIFSEANFKTYNFRIRA
KMETYNDETRLKCSCVGATPLDFQKECRRLMEEIKKLQAL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttatccgaaggagcaattcaggatattttgtttaaagcggctgatcagcatccccag
aggcctgtttttcagatattgggaattaaaaaaattcaagcaaaaagcaatgatggagcg
ggcaatgatcgttacaggcttgtggtctccgatggtatatatctctatacttctgccatg
ttagccacccagctcaatgacttagtgacatccaaacaaatagaggtcaaagctgttatc
cggctggataaatacatctgtaatataattcaggagacaaggaaagttttgattgttttg
gaactttctgtgttaaaagctgcacatgaagtgatgggtaagataggagacccaaagccc
cttaccacagattcaaaaggggatcaacagcaccagcagcaaccccaacaaaatggtagt
ggaccagtgcagcgtaacgtgacagatgaccaccatcaaaaccagcctcaaagagggtta
gctggacagcagtccagagctggaattgtgggtagcaagcaaacaggaggacctcttagg
acaggaggacttgcctctgccacatatggaagtaatcagcaagtattccgaggaggagag
aattccaaacctgtttacccaataagttctttgacaccatatcaaaacaggtggacaata
cgtgctcgtgtaacaagcaagtctagtatacgcacatggagtaattccaaaggggatggg
cgtgtcttcaatgttgatcttgtggatgaatcaggtgaaatcagagccacaggatttaat
gatgctgttgacaagttttatgaaatcctggaagccaacaaggtgtactatatttccaaa
tgttctttaaggactgcaaacaaacagtactcttctatcaagaatgattacgagatgtat
atcaacaatgatacaatgattgaattgtgtaatgacccttgtgacttgcccactatacag
tataactttgtcagcattggggatttggctaacttcaatggaaatgacatggttgacata
ctgggagttgtgatcaacattgatgatgttacacagattactacaagagcaaccaacaga
cagatgtctaagagggatgttacattgttggatagatcagagaaaagtgttcgagtgacg
ctttggggcgattatgctgagaaatttgaggaacatattggaaacaatccagttcttgcc
ttgaaaggagtaaaagtttcagagtatggaggtcgttcactgtctgtattaaactctaca
aacattatggttgatccaatggatctcaaagaagctcacagtttacgtggatggtacatg
aatgttggtaaagatacagctgttgagtcaatgtctggactgagatcagatggatcagtt
ggttctggtaattacaagactttactgcaagtcaagtcagaacagcttggaatgggtgat
aaaccagactatttcacagcaaaggctacagcagttttcttcaagaaagataactgttta
tacaaggcttgcccttctgcagattgcaataagaaagttatcgaagaaggagatggaact
tatcgctgtgaaaagtgcaacaaaacccatcctgatttcaagtatcgcctaattttatcg
gcaaatttagccgatttttcggggaatcagtggatcacgtgtttccaggagacagcagag
gcaatactcaacaccagcgcaaaccaagttggtcagataaaggactcgggtgatgagcgg
gcctatgatcacatcttttcagaagcaaacttcaaaacttacaatttcaggattcgggct
aaaatggagacatataatgatgaaactcgcctcaagtgttcatgcgtgggtgcaacccca
ttagatttccaaaaggagtgtagaagacttatggaggagattaagaaactccaggctctt
tag
DBGET
integrated database retrieval system
