Montipora foliosa: 137976064
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Entry
137976064 CDS
T10576
Name
(RefSeq) THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
mfoo Montipora foliosa
Pathway
mfoo03013
Nucleocytoplasmic transport
mfoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137976064
09122 Translation
03013 Nucleocytoplasmic transport
137976064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
137976064
03041 Spliceosome [BR:
mfoo03041
]
137976064
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137976064
Spliceosome [BR:
mfoo03041
]
Complex C
Other components
EJC/TREX
137976064
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137976064
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
LprI
Motif
Other DBs
NCBI-GeneID:
137976064
NCBI-ProteinID:
XP_068679431
LinkDB
All DBs
Position
11:38512722..38544333
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AA seq
554 aa
AA seq
DB search
MAADARMDFKTATMRLASCVSKAKDVDDLVDFTSVFQETPGSEQEKKLIVDQIFRDLVKE
QLVKGKNVERCKCLIKLVIKSAVEGHCSPNLVFILLSDMFDCITLEQCDPLFNFVEEKVS
TWTMPLFFSAGKNLLLRMCNDLLRRLSTSQNTVFCGRIQLFLARLFPLSEKSGLNLMSHF
NYENITTYTQRPAADQKDKSSTTGSEMEVDDREAGELTSSNVPIDFNLYKKFWALQDYFR
NPTQCYNTAGWKPFTDYTKDVLNVFKSHKLEHVTWKKKAGDLKNLDGSKDEARYFAKFLT
NEKLLDLQLSDSNFRRTILIQMLIIYQYLVGNVKFKSTNQVLNESQSAWVKEMTSKVYEL
LKETPPDGDKFAKAVEHILEREENWISWKNEGCPSFIKERIESDIKPTSTRKRKASIGDE
VAAGWKSKKVVMGSDELTRLWNLCPDNLEACKADNRVFLPSLEDYFSEAIDQADPEAMVE
DEYKVIKNSNYGWRALRLLARRSHHFFQPSANPFKTLPDYLDSVVQQLAQELPNLKSEDG
IAVNGTTDSTVPLT
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacgcgagaatggattttaaaacagcaacaatgcgtttggcgtcatgtgta
agcaaagcaaaagatgttgatgatctcgtggattttacctctgtcttccaagaaactcct
ggaagcgaacaagaaaagaaactgattgttgatcagatttttagagatcttgtaaaggaa
caactggtaaagggaaagaatgtggagagatgcaaatgtttgattaaattggtcattaag
tctgcagtggaaggacactgttctccaaacttagtctttattttgctgagtgacatgttt
gactgtatcactttagaacaatgtgacccattgttcaattttgtggaagaaaaagtgtct
acttggacaatgccgttgttcttttctgctgggaaaaaccttcttttaaggatgtgcaat
gatttgttacgccgtctatctacatctcagaatactgtattttgtggaaggatacagctg
tttttggcaaggctctttcccctctctgaaaagtcaggattaaacttgatgagccacttt
aattatgaaaatattacaacttatacacaaagaccagcagctgatcaaaaggataaaagt
tccaccactggaagtgaaatggaggtagatgacagagaagctggagagttgacttcaagt
aatgttccaattgattttaatctgtacaagaaattttgggccttgcaagattacttcaga
aatcctactcagtgttataacactgcaggatggaagccttttacagattacactaaagac
gtcttgaatgtctttaaaagtcacaaattagaacatgtaacatggaaaaagaaggcaggg
gacttaaagaatctagatggaagcaaggatgaggctcgttactttgcaaagttcctgacc
aatgaaaagctcctggatcttcaattaagtgacagtaactttaggaggactatccttatt
cagatgttaataatataccaatacctagtgggcaatgttaagtttaaaagcacaaatcaa
gtcctcaatgaatcgcaaagtgcctgggtaaaagaaatgacatccaaagtgtacgagtta
ctaaaggaaacgcctccagatggggataaatttgcaaaggctgtggagcatatcctagaa
cgagaagagaactggatatcatggaaaaatgagggctgtccatcatttataaaggaaaga
attgaaagtgacattaagccaacatcaacaaggaagcgcaaagccagcattggagacgag
gttgcagctggttggaaatcaaaaaaagtggttatgggaagtgatgaattgacccgtctg
tggaatttgtgtcctgacaatctagaggcttgtaaagcagataacagagtttttcttcca
tctcttgaggactatttttctgaagccatagatcaagctgatcctgaagccatggtagaa
gatgaatacaaagttatcaagaacagtaactatggctggcgagcattgcgtcttcttgct
cggagaagccatcactttttccagccaagtgccaatcccttcaaaacactcccagattat
ctggacagcgtggtacagcaactggctcaagaattaccgaacctaaagagcgaggatggt
attgccgtaaatgggaccacagactcgacagtgcctttgacatga
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