Montipora foliosa: 137976103
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Entry
137976103 CDS
T10576
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
mfoo Montipora foliosa
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mfoo03009
]
137976103
Enzymes [BR:
mfoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137976103
Ribosome biogenesis [BR:
mfoo03009
]
Eukaryotic type
Pre-60S particles
Helicases
137976103
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
137976103
NCBI-ProteinID:
XP_068679479
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All DBs
Position
11:complement(31996304..32019919)
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AA seq
593 aa
AA seq
DB search
MATSWSELKPSLSDSVLKIIGKFGFHTMTPVQTATIPLFMSHKDVAVEAVTGSGKTLAFL
IPIVEILLKREEKLKKHDVGAIIISPTRELAKQIDEVLQMFTEDLSHLRQLLLIGGVDPL
EDIQKFKSDGGHILIGTPGRLEDFFSRKKGGLDLAAHVRSMEVLVLDEADRLLDMGFEAS
INTILGFLPKQRRTGLFSATQTDEVKALIRAGLRNPVRVTVREKFSKAKSEQRTPSTLKN
FYTICEGDKKFSTLVAFLKARKTSKNMVFFSTCACVNYFSKALERLLSNVTVLSIHGKMR
SKRHKVFDSFRKLTSGVLVCTDVMARGVDIPEVDWVIQFDPPSSANAFVHRCGRTARIGN
QGNALLFLLPAEESYVDFISINQKVPLQPFEIEETATDIVPNLRKMAKKDRDIYDKGMRA
FVSFVQFYRKHECSLIFRTADLNLGKLATGFGLLKLPVMPELKEKIVDFQPVDIDVEKIN
YKDKNREKERKRKLQEQQDSFGDISQKTSDQQRRKKMKRGFIASSKNTERKDRKEKLKAQ
RGFPKKKRQQYYFDQSELEDLAREANLVKKLKAGKISKEEFESRIGNEEEEDE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcgtggagtgagttgaaacccagcttgtccgattccgtattgaaaatcatt
ggtaaatttggctttcatacgatgacgccagtacagacagccacgattcccctgtttatg
tcgcacaaagatgtcgcagtagaggcagttacaggatctggaaaaacgctggcattcctg
attcctatagtagaaattctccttaagagggaagagaagctcaaaaagcatgatgttggt
gcgataatcatatctccaacaagagagttggcaaaacagattgatgaagtgctccaaatg
tttactgaagatctttcacatttaaggcaactattattgattggaggagtggaccctttg
gaagatatacaaaagttcaaatcagatgggggccatatacttattggaactccaggacga
cttgaggatttcttttcaaggaaaaagggtggattagaccttgcagcacatgtaagatca
atggaggtcctggtattggatgaggctgaccggctactggacatggggtttgaagcaagt
attaacacaattttgggcttccttccaaagcaaagaagaacgggtctcttctctgccact
cagactgatgaggtcaaagcactaattagagctgggctcaggaatcctgtcagagtgaca
gtacgtgaaaaattctctaaagccaagtctgaacagaggactccatctacactaaaaaat
ttctatacaatttgtgaaggggacaaaaagttttcgactttggtggcttttctcaaagca
agaaaaaccagcaagaacatggttttcttcagcacatgtgcctgtgttaattatttttca
aaggcacttgaaaggctcttatcaaatgtcactgtactgtctatccatggcaaaatgagg
tccaaacgacacaaagtgttcgattcgtttagaaagctaacaagtggtgttcttgtctgc
acagatgttatggctcgcggagtggacattccggaggtggactgggtcattcagtttgat
cctccaagcagcgcaaatgcctttgtacatcgttgtggaagaacggcaagaattggaaat
caagggaatgctttgctgtttttgcttccggcggaggagtcttacgtggactttatatcc
ataaaccaaaaggtccctcttcagccgtttgaaatcgaagaaaccgccacagatatcgtc
cccaacctaagaaaaatggcgaaaaaggacagagatatttacgacaagggaatgagagca
ttcgtgtcctttgtgcagttctacagaaaacacgagtgtagcctgatcttccgaacagct
gatttgaacctcggaaagctagccaccggatttggtcttttaaagttgcccgtcatgcca
gaactcaaagagaaaatagtagactttcaaccagttgatattgatgtggaaaaaataaat
tacaaagacaaaaatcgcgagaaggagcgaaagaggaagctccaggaacagcaagactcc
tttggggatatttcccaaaaaacgagcgatcaacagaggaggaagaagatgaaacgcggt
tttatcgcctcgtccaaaaatacagagaggaaagataggaaagaaaaacttaaagcacag
agaggatttccaaagaaaaagcgccagcaatattattttgatcaaagcgaacttgaagat
ctggcacgtgaggccaacttggtgaaaaaattgaaggcaggaaaaattagcaaagaggaa
tttgaatccagaattggaaatgaagaagaagaggatgaataa
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