Montipora foliosa: 137978393
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Entry
137978393 CDS
T10576
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
mfoo Montipora foliosa
Pathway
mfoo03013
Nucleocytoplasmic transport
mfoo03015
mRNA surveillance pathway
mfoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137978393
09122 Translation
03013 Nucleocytoplasmic transport
137978393
03015 mRNA surveillance pathway
137978393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
137978393
03041 Spliceosome [BR:
mfoo03041
]
137978393
03009 Ribosome biogenesis [BR:
mfoo03009
]
137978393
03012 Translation factors [BR:
mfoo03012
]
137978393
Enzymes [BR:
mfoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137978393
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137978393
mRNA cycle factors
Stress granule specific factors
137978393
Spliceosome [BR:
mfoo03041
]
Complex C
Other components
EJC/TREX
137978393
Ribosome biogenesis [BR:
mfoo03009
]
Eukaryotic type
90S particles
Helicases
137978393
Translation factors [BR:
mfoo03012
]
Eukaryotic type
Initiation factors
eIF-4
137978393
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
ResIII
AAA_30
Cas3-like_C_2
AAA_22
UvrD-helicase
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
137978393
NCBI-ProteinID:
XP_068681382
LinkDB
All DBs
Position
12:6719403..6732666
Genome browser
AA seq
403 aa
AA seq
DB search
MSRKRKVVADEEEDPTKVEFETSEEVDVVPTFDQLKLREDLLRGVYAYGFEKPSAIQQRA
IKPIIKGRDVIAQAQSGTGKTATLSICVLQSIDIQTRETQALILSPTRELAQQIQKVILA
LGDYMSIQCHSCIGGTNIGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRSIKLLVLDE
ADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHDILEMTEKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLVEKMREANFTVSAMH
GDMPQKERDAIMKEFRSGESRVLISTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVGDLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtaaaagaaaggttgtagcagacgaggaggaagatccaactaaggtcgaattc
gaaacatcagaggaagttgacgttgtgccaacgtttgaccagcttaaacttcgcgaagat
ttgcttcgaggcgtttacgcctacggttttgaaaaaccgtcggcaattcaacaacgtgcg
attaaaccgataataaaaggaagggacgtgattgcacaggcacagtctggtactggaaaa
acagccacactttccatctgtgtcttacagtccatagatattcagacaagggagactcag
gctctgattctgtcaccaacacgtgaactcgctcaacagattcaaaaggttatccttgct
cttggtgattacatgagcattcaatgccattcctgtattggaggaacaaatattggtgag
gacataagaaaactggattatggccagcatgttgtgtctggtactcctggcagagttttt
gacatgatcagaaggcgtaacttgagaactcgttcaatcaagttgctggtactggatgag
gcagatgaaatgttgaacaaaggtttcaaggaacaaatttatgatgtttacagatatctt
cctcctgcaacccaggttgttctgttaagtgcaacacttccacatgacatcttggaaatg
acagagaagtttatgacagacccgatcaggattctggtgaaacgtgatgaattgacattg
gagggcattaagcagttctttgtggcagttgagcgtgaggaatggaagtttgacactctt
tgtgatttgtatgacacactcaccatcacacaggcggtcattttctgcaacacaaagaga
aaggtggactggcttgtagagaaaatgagggaagctaactttacggtgtcagccatgcat
ggtgacatgcctcagaaggaaagagatgccattatgaaagagttcagatctggagagagt
cgtgtgctgatttccacagatgtgtgggcaaggggtattgatgtacagcaagtctcactg
gttattaactatgacctgccaaacaaccgtgaattgtacattcacaggattggtagatca
ggtcgctttggtcgcaaaggtgtagcaatcaactttgtgaagtcagatgacattagaatc
ctgcgcgacattgaacagtattacagtacacagatagatgaaatgcccatgaatgttggt
gatctaatttaa
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integrated database retrieval system
