Montipora foliosa: 137979256
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Entry
137979256 CDS
T10576
Name
(RefSeq) symplekin-like isoform X1
KO
K06100
symplekin
Organism
mfoo Montipora foliosa
Pathway
mfoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137979256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfoo03021
]
137979256
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
137979256
Transcription machinery [BR:
mfoo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
137979256
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
137979256
U7-dependent histone pre-mRNA processing factors
137979256
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
137979256
NCBI-ProteinID:
XP_068682575
LinkDB
All DBs
Position
12:23895883..24099539
Genome browser
AA seq
1199 aa
AA seq
DB search
MKGLTRSKMAAEGRTRVRLSVASQFFNNEDVDSLAASGENSAEDSTSEKVIDLLNQAQLE
KDNKLNCLKQVQEFILNKDPTLLDNFLDEILVFQQDRSADVRRFVVGFIEEACKKDIELL
SKVQNTLAFMLNDENVAVQKRVMLSVTQLYKFALQHICKQKAISEDLEHLWELLIQIKEQ
IIDMLESDNDGIRTHAIKFIEMLVLVQSLKSQDSESLKKGEADISLEIVPRNHPLVKMTE
LREEGGSMLETLLTLIASPTISSVNLMAALGSLSAIARQRPAFMSIVVQAFESLHANLPT
SLSKSQVSSVRKNLKLHLMSLLKHPSSVEFLPQITTLLTDLGASQAELQRNMPKPSAEKR
RAEPEAIASAKKPKIDTEEVETMSTSDAVEMTAQDIIPRLNKDTVTDLVLVSMLALPDSL
PSHFHDTYTPIAAAGGQAQVVHLARLLATQMNAAKVGKGYERMEALRKAANDPRLKEAEI
MSIPVIGGAGSWGNNEAGADENQMFSYGQNQPEEDTALKRMLGGHFDLTKEKRALDLRKT
PFVPKEPAVPQLRMRKIKPFKLSDVTRILNPEERQKVMTTAVNRILKAESSAARSGVIQE
RINLLVGLVTQLGGDLRNVLLDFIQEDIRARYDLLMSWLYQEYSASESDEPSDELEAAPS
YCECLLNLMDGLYSNLDPKDKIFTRILLDIPALTEGAVMAVRMYCEDLERLQVGFSSLRE
LILKRPAAQLQLLQTLMDLTTNEKEQVRVQAIHSGKKLHARPELAEYIEKYALESLQQLL
ADHPPAPVGQDPDEVIAPGEWTDDSIKLCLYLYLALLPQNHKLFHELAKVYTASSQIIKR
IILRHLEHPVRAIGMASPELLQLVENCPTGAETLIARILNIITDKAVPTAELVKRVKELY
HKRVSDVRFLIPVLTGLTKQEIIAVLPKLIKQSPSVVKEVFNRLLGCFHSDSKVSATSPL
SPSELLVALHQIEAKSDMKSVMKASSLCFAEKTIYTQEVLAVVLHQLMELNPLPTLFMRT
VIQSLSICPRLVGFVMNILAKLITKQVWKQPKVWQGFVKCCQMTKPQSFSVLLQLPFRQL
ESVFEICPELKENLVAHVQSFTPHQRAHIPRSLLQILEKDPKKEEKKIKQEKPDKEQIDP
QDEENPTNEDKSPKRTRSHTKESQKEKRKSRRSRSRSRSPRKKKEKSSGEESASEGEVN
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggctcacacgttccaagatggcggccgaaggtcggactcgtgttcgcctgtcg
gtcgcttcacaattctttaataatgaagatgtcgacagtcttgcagcatcaggagagaat
tctgctgaagactccacgtctgagaaggtcattgatttattgaatcaagcccaacttgaa
aaagacaacaaactgaactgcttgaaacaggtgcaagagttcatacttaataaagatcct
acactacttgataatttcttggatgaaattctagtatttcagcaggacagatcagctgat
gttcgccgatttgtggttggatttatagaggaagcatgcaaaaaagatattgagctattg
agcaaggtgcaaaataccctggcatttatgctaaatgatgaaaatgttgctgttcagaag
cgagtcatgcttagtgttacacagctgtataagtttgctttgcagcacatttgcaagcaa
aaagccatatcagaagacctggaacacttgtgggagcttctgattcaaatcaaagaacag
attatagatatgttggagtctgataatgatgggataagaacacatgcaataaaattcata
gagatgttggtcttggtgcagtctctgaaatctcaggattctgagtcacttaaaaaaggt
gaagcagacatctcattggagattgttcctagaaatcatccattggtcaaaatgacagag
ctgcgggaagagggaggatcgatgcttgaaactctgctgactctcattgcctcccccacc
atctctagtgttaacctgatggcagcccttgggtctctgtcagccattgcacgtcagaga
ccagccttcatgtcaatagttgtccaggcttttgaatctctgcatgctaaccttcccact
tcattgagcaaatcccaagttagcagtgtgcgaaagaatctcaagcttcatctcatgagt
ctgctgaaacatccttcatcagttgagtttcttccacaaataacaaccctcctcacagat
cttggggcttcccaagctgagctacaaaggaatatgccaaaaccaagtgcagagaaaagg
agggctgaaccagaagccatagcttcagcgaaaaagccaaaaattgatactgaagaagta
gaaactatgtcgacatcagatgctgtggaaatgacagcacaggacatcatcccgaggtta
aataaggacacggtaacagatctggtgttagtcagcatgttagctcttcccgacagcttg
ccatcgcacttccacgatacgtacacgcccatcgctgcggcaggaggccaagcgcaagtg
gtgcatcttgcccgtctgctggccacgcaaatgaacgccgcaaaggttggaaaaggctac
gagaggatggaagctttgagaaaggctgcaaacgacccaagactgaaggaagcagagatt
atgtcgatccctgtgattggcggagcgggttcttgggggaacaatgaagccggtgcggac
gaaaaccaaatgttttcatatggtcagaaccaaccagaggaggataccgcactgaagagg
atgttaggtgggcattttgatctgacgaaagagaaaagggctttggatttaaggaagact
ccattcgttcccaaagaacctgccgtcccacaactgcgcatgcggaaaattaaaccgttc
aagctctctgacgtgacaaggatcctgaaccccgaagagcgacaaaaagtgatgactaca
gcagtgaatagaatactaaaagctgaaagcagtgcagctcggagtggtgtcatccaggag
cgtatcaaccttctcgttggccttgtcacacagctgggaggagatttgagaaatgtcctt
cttgacttcatacaagaggacatccgcgctcgttatgatttgctgatgtcctggctttat
caggaatacagcgcatcagaaagcgatgaaccgagtgacgagcttgaggcagccccatcg
tactgtgaatgtctgctaaatcttatggatggcttgtattcgaatttggatcccaaggac
aagatatttactcgcattttactggacattccggcactgacagaaggagctgtgatggca
gttagaatgtactgcgaagatttggagcgccttcaagttggattctctagtctaagagaa
ttaatcttaaagcgaccagccgctcagttgcagctacttcaaaccttgatggaccttacc
acgaacgagaaggagcaagtcagagtgcaggcaatccactctggaaagaagctccacgcg
agaccagaactggcagaatacatcgagaaatacgccctggaatcgctccagcagctttta
gctgatcatcccccagcgccagtgggacaagatcctgatgaagtaatcgcccctggagaa
tggacagacgactccataaaactctgcctttatctgtacctagcgctgcttccacagaat
cacaagctctttcacgaactcgcaaaagtatacactgcttcctcgcaaattataaagaga
atcatcctcagacatcttgaacatccagttcgtgcgattgggatggcgtcccctgaactt
ttacagttggtggagaattgtcccacgggagctgaaacgctcattgctaggatcctcaac
ataataactgataaagctgttcccacggccgagcttgtcaagagggtcaaggaactttac
cacaagcgcgtgtctgacgtacgatttctgatacccgtgctcacgggtctcacaaaacag
gaaatcatcgcggtgctgccgaaactgatcaagcaatcacccagtgtggtcaaagaagtc
ttcaacagactactgggctgctttcacagtgactcgaaagtatccgctaccagtcccctc
agtccatcggaactcctcgttgctcttcaccagatcgaggccaaaagtgacatgaagtct
gtgatgaaagccagcagtctgtgtttcgcggagaagaccatttacacgcaagaggtgtta
gccgttgttttgcatcagctgatggaactgaatcctctccccactctattcatgaggacg
gtgatccagtccctcagcatttgccctcgcttggttggttttgtgatgaacatacttgct
aaacttatcaccaaacaggtgtggaaacaaccgaaagtctggcaaggatttgtaaagtgt
tgtcagatgacaaaaccccagtcattctccgttcttcttcagctaccctttcgacaactg
gagagtgtgtttgagatctgcccagaactaaaggaaaacttagtagcacatgttcagtcc
ttcactccccatcaacgtgcgcacatcccacgatccttactgcaaatattggaaaaggac
cccaagaaagaagagaagaaaataaagcaggaaaaaccagacaaagaacagattgatccc
caagacgaagaaaacccgactaacgaggacaagtcaccgaaaaggacacgatcgcacacg
aaggaatcacagaaagagaaacgtaaatctcgtcgatctcgatctcggtccaggtcgccg
cggaagaaaaaggagaaaagctctggtgaggagagtgcgagtgaaggcgaggtgaactga
DBGET
integrated database retrieval system
