Montipora foliosa: 137980507
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Entry
137980507 CDS
T10576
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD-like isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mfoo Montipora foliosa
Pathway
mfoo03022
Basal transcription factors
mfoo03420
Nucleotide excision repair
Brite
Enzymes [BR:
mfoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
137980507
Transcription machinery [BR:
mfoo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
137980507
Chromosome and associated proteins [BR:
mfoo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
137980507
DNA repair and recombination proteins [BR:
mfoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
137980507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137980507
NCBI-ProteinID:
XP_068684064
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Position
12:complement(33447876..33474677)
Genome browser
AA seq
759 aa
AA seq
DB search
MKLNIDGLLVYFPYDYIYPEQYSYMMELKRTLDAKGHCLLEMPSGTGKTISLLSLIVAYI
LTKPLELSKLIYCSRTVPELEKVLEELKVLLEYYERETGQKPKLMGLGLSSRKNLCIHPE
VSAEREGKKVDGKCLGLTASYVRVKHKEDHSVPVCALYESFDAHGKEEKLIPGVYNLDDL
KTVGGKKGWCPYFLARHAIYHANVVVYSYHYLLDPKIADLVSKELEKSSVVVFDEAHNID
NVCIESMSVTISRRTLDRSHGNVDALARTIKSIKERDAGKLREEYNKLVQGLRETSAARE
TDMVLSNPVLPDELLEEAVPGNIRQAEHFVNFMRRFIEYLKTRLRVQHVVQESPPSFLQH
VFQQVYIERKPLRFCAERLSSLLHTLELPDVQDYGPLTLIANFATLVSTYNKGFTLIIEP
FDDRTPTIPNPILHFSCMDASIAIKPVFDRFQSVVITSGTLSPIDMYPKILDFRPVTMAT
FTMTLARICLCPMIVGRGNDQVAMTTKFETRDDMSVIRNYGNLLAEMSGVVPDGIVCFFT
SYQYMEAVVSIWHDQGIISNIQRNKLLFIETQDAAETSLALYNYQQACENGRGAILLSVA
RGKVSEGIDFDHHYGRAVIMFGIPYVYTQSRILKARLEYLRDQFNIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGIMVFADKRFFKVDKRSKLPKWIQEYLREGVCNLSIDEAVQVSKRF
LRQMAQPFDKEDQLGLSLLTVEQVESEEFQKRILQTAVA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaatatcgatggccttctggtatattttccctacgactacatttatcctgaa
cagtactcttacatgatggaattaaaacgaactttggatgccaagggtcactgtcttctg
gagatgccgtctggaactggcaaaacaatatcattgctgtccttgatagttgcttacatt
ttgaccaaacctcttgagctgtcaaaactcatttattgctcccgtactgtgccagagcta
gaaaaggtcctggaggagttgaaagtgcttttggagtattatgaaagagaaacgggacag
aaacccaagctcatgggtttaggactgagctcaaggaaaaatctctgcattcaccctgag
gtaagtgcagaaagagagggcaagaaagtggatgggaagtgtttaggtttgacggcatcc
tatgttcgtgtaaagcacaaagaagatcattctgttcctgtttgtgcactgtatgagtct
tttgatgctcatggcaaggaggagaaactcatcccaggggtatataacttggatgatctc
aagacagtgggtggcaagaagggttggtgtccatattttctcgcaaggcatgcaatctat
catgctaatgttgttgtatacagctatcattacttgttggatccaaaaatagctgacctt
gtttccaaggaactggagaaaagttctgtagttgtgtttgatgaggcccacaatatagac
aatgtatgcattgaatctatgagcgtgactatatcaaggagaacattagacagaagccat
ggcaatgtggatgcattggcaagaacaataaagagtattaaagaaagagatgctggtaaa
ttaagggaggagtacaataaacttgttcaaggtctacgtgaaacaagtgctgcacgagaa
actgacatggtgttatctaacccagtgcttccagatgagttgttggaggaggctgtccca
gggaacattcgacaagctgaacattttgtgaactttatgagaagatttattgaatactta
aagacacggctcagagtacagcatgtggtacaagagagtccaccatcttttttacaacat
gtatttcaacaagtctatattgaaaggaaaccactcaggttctgtgctgaacgactaagc
tctttgctgcatacattggaactcccagatgttcaagattatggacctctgacacttatt
gcaaattttgctactcttgtaagcacatacaacaaagggttcactcttatcattgaacct
tttgatgacagaacaccaactatacccaaccctattctccatttcagttgtatggatgcc
tctattgctataaaacctgtgtttgatagatttcagtcagttgttatcacgtcagggacc
ttatcaccaatagacatgtatcctaagattctggactttcgcccagtcaccatggcaacg
tttactatgacccttgccagaatttgcctttgtcccatgattgtaggtagaggaaatgat
caagttgcaatgacaacaaagtttgaaacaagagatgacatgtctgttattcgtaactat
ggaaacctcttggcagaaatgtcaggagtggtgcctgatgggatagtctgtttcttcact
agttaccagtacatggaggcagttgtttccatttggcatgatcagggtattattagcaat
attcaaagaaacaagctgctgttcattgagacccaagatgcagcagaaaccagtttagct
ctttataattaccaacaggcttgtgaaaatggaagaggtgctatattactttcagtagcg
agaggaaaggtttcagagggaattgattttgatcatcactatggcagggctgtcattatg
tttggtattccatatgtctatacacaaagtaggattttaaaggccagacttgagtacctc
agagatcagtttaacatcagagaaaacgacttccttacttttgatgccatgaggcacgct
gctcagtgtgttggtcgagcgatccgcgggaaaacagattacggtatcatggtgtttgct
gacaagaggtttttcaaagtcgacaaaagaagtaaactaccaaagtggattcaggaatac
ttaagggaaggggtctgcaacctctctattgacgaagcagtccaggttagtaagagattc
ctgaggcaaatggcccaaccctttgataaggaggatcagcttggcctgtcacttcttact
gttgagcaggtggaatctgaggagttccagaagcgaattttacagacggctgttgcttaa
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