Montipora foliosa: 137982582
Help
Entry
137982582 CDS
T10576
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
mfoo Montipora foliosa
Pathway
mfoo04382
Cornified envelope formation
mfoo04512
ECM-receptor interaction
mfoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137982582
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137982582
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
137982582
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mfoo04147
]
137982582
00536 Glycosaminoglycan binding proteins [BR:
mfoo00536
]
137982582
Exosome [BR:
mfoo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
137982582
Glycosaminoglycan binding proteins [BR:
mfoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137982582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
VWA
VWA_2
Motif
Other DBs
NCBI-GeneID:
137982582
NCBI-ProteinID:
XP_068685798
LinkDB
All DBs
Position
13:22887227..22973745
Genome browser
AA seq
1970 aa
AA seq
DB search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NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgaggttaaggtcggcctcgctagtcgtcctccttttcctcgttttccaaacggtgaat
tcacaggatcaaaatgatgatgaatgcaactgcaaaagtggacccaaaggttcaagggga
aggccaggtcaacatggcaaacgaggattacaaggattagagggtcctcctggaagagat
ggcttgagaggcttaaaaggatacaagggaaatgctggagtgtccggggagattggagaa
gcaggtgaaaagggattggttggtgttcctgggtttccaggccttcatggaataccaggt
attccaggtattcatgggcccaaaggtttcatgggactctgtggttgtgatggggaaaaa
ggagaacctggctttgatggacagacaggcaccatgggtgttgcgggtgatcctggggac
aaaggcccacagggccccaagggtgatgcatatgatggcccagttaatgcaactaaaggt
gcccagggccctaatggaacaaaaggagaaatgggacccaagggaccagttgggcctgat
ggtaaagctggtatcagaggaaatcgtggtgaagttggggggctgggaattccaggagag
aaaggtcctaaaggagagaagggtgataacgcaacggctgagaatgttactgaagatgca
ttgaaaggggaaaaaggcatgatgggaattcctggtgagcctggtggcagaggagaagtg
gcatttgatggtcgaaaagccgacattgtgaaaggagcaaaaggcgagaatggatctctt
ggtatgaaaggtatcaaaggaccgaagggtgatccgggatctgagcatggcccaagtggt
gtgcaagggcctcctggaagcaaaggaaaacctggtgatgctggaatgggtggtgtaatg
ggagcaaatgggactgatggagataagggacaacctggcttaaggggtgacactggttca
caaggtgataagggtgaaactggccctgatggtccaacaggattgaaaggtgatgttggc
cctaaaggtgtgcaaggccttggtggagcaagaggagttggggtacctggaaatacaggt
gacaaaggacaaaaaggaattgctggaatccctggtgatagaggagaaaggggtgacgag
ggtgaagcaggacctcctggtgatccaggaccttctgtctttggaccacagggagacaag
ggtgctgttggatcaacaggtgcagatggaccccctggggatccaggatttgagggtatg
caaggccctttgggacccaaaggagcggaaggacccaacggggaaaaaggagagcaggga
gaggtgggtgtggaattgaaagggagagaagggatggctggatccaagggacagaaagga
atcaagggaatgcaaggagagcttggccctcagggccctccagcaatgccactcttctgt
gcagaagatggtgaatgcccagagaaacaacctgggcctccgggtccacctggagaacct
ggtctgcaaggtccacaaggtaacgcagggcagaaaggtgcaaagggagataaggatgtt
tgccccatgtgtcctcctgggcaaaagggtcctaaagggaatcgaggaattcctggacca
cctggtagcaatggtacacaaggagcagatggaattaagggtgcccaaggtcctactggg
gaaactggagttcctggggttgatggtgaaccaggagagaagggtgctaagggcctgcaa
gggccacaggggctagagggagagaaaggggaaaggcctattggtccaagagaagaattg
gctggaacacctggtccccaaggagaccaaggtgaaaatggatctaagggaaagcctggt
tcacttggtacaaatgggatgcgtggacaagatggacctcaaggagaagaaggtccccct
ggccttgatggattgaagggagatgatggtttgcctggtcgcgatggagaaaaaggctct
tctggcaaagagggtgaaatgggagacaagggtgatgctccacccccgccccccatacca
gaaatgggtatcgcgggaatcacgggtgaaaaaggactgaaaggagatgagggagccaaa
ggggtaaaaggtcaaaaaggagatttcccagacgcagcagctataaaggaatttaagggt
ccattaggtgagactgcagtagtaaatggatctaaaggtgagaagggagagaaaggtttg
aatggctcaaggggagactctggtgcaaatggagcacaaggcatgaaaggtgaaccagga
ctggactcaaaaggacctgctggaatgattggtgaaccaggcgcagttggtgttaatgga
agtaggggtcccaacggcgacaatggtgagcaaggtccacagggtgtccaggggccacca
ggagaagcaggagcagttgggaatgttggagaaccaggagacagcatacctggtcccaat
ggaacaagtggagaaaatggtctcaagggcgaacaaggttcgaaaggagagccgggtagt
aatggcaatccaggaaccaatggtactaagggtgatagaggcccacaaggacctaaagga
gcacaaggtggaaatggaacaattggatctactgaaggctctacaggtgctaaaggagag
gttggagaaaaaggacccagtggtgatagcatcattggacccccaggggagcctggattg
ataggaatgcctggtgttccaactagaggtgatcctggtgagccaggtgacgtaggagtc
agaggtgtgggtggagaacctggaaaagcaggcccaggtggtctacaaggagacgatggg
ccaagaggaccaccaggacagcctggacctcaaggagagaaggggaatattggagaaata
ttgtgtggccaattaaatgcagattatgcctttgccatggatacttcaggaagcattctg
gtccctgaatttgaaattatgaaggattttatcaaacaagtcattgacttccttctaatt
ggaccaaacttgacccatgttgggctgattgattacagcaatcgtgccagtttgcagttc
gactttttacagtcttttgagaaagagcaaatcaagagttatgttgaggctgtgccccgt
acacaaggtttgacacggattgatttagcgctcaaagttgcatcagaagagctgttcaca
cctacaggaggaatgagagacacttcgagaaaggtactggtcctcctcaccgatggtaac
caaactggaacagacaaggcccctaatcagactcctttggtggacgctgtccagccaatc
aagaatcttagtgtaaaggtgattgccattggcataggaagtgtggatagaaaacagctg
gctacattagtctcggaccccaacgatattctgcagccaagcagttttgctgaacttctt
actctggtgcgaacaactgttggcaaaagctgtagaggtccacacggtgacgcaggtccg
cgagggcccaaaggtatcccgggagaaggcggaattaagggaatagtgggtccaccaggc
gagagaggtgatcaagggcgtaagggcgagcaaggtcctacaggggttcctggacctcaa
ggagttgtcggtgataatggaacgaggggcgatcaaggaccaccaggaaaagcaacacct
ggttcaaagggaccaaaaggtgaccccggcgatcctggaccgccgggagaagatggtttg
ctcggcttggatggacttcagggagaccagggtgcgctaggagcagctggtgaacgtggc
agcgaaggggatgatggtcctcaaggtgctccgggacctgcaggagtctctggtcttgtt
ggagagaaaggtattttaggccctccgggacttgaaggaattgctggtatgcagggagct
gatggtgttcgaggtccgaaaggtcaaaagggtgtgattggtttccctggaactccagga
gaagaaggtgattttggtgacgtgggaaaaaacttgcctggagagaagggagaacaaggc
gaagaaggaaagccaggaatgggtggtttagaaggctttcctggagaaattggagacgtt
ggtgcacgtggggcagcgggaaatgccactcctggagatcctggggatgctggttccccc
ggagttaagggagctaagggtgaacccgggcctgctcagatagagggcgtggcatttcca
tcgggtgatcaaggggagccagggcgtcctggtaaaatgggcatgccgggattagatgga
gatcctggagatgctggagcaatgggagaaactggagggagtggtccacctggtgaacca
ggtcaaagtggtgaaaaggggtctgaaggttccggggggttgccgggcgtgtcaggtgaa
aaaggttcaccaggtgccccggggaacagaggggaacaaggccaagaaggtgaaaaagga
tcaaaaggcgagagaggaccagatggccctcaaggttcaaagggcgaaccgggtaaagct
ggtttgcctggcaatgcggggaatgatggcgtttcaggagaaacaggtcccactggaccc
caaggggagaaaggttctgccggttccgacggccagggtggtgcccctggcgagaagggc
ggaaggggggaagaaggagcccagggaccacgcggagatgatggaacacagggggaaact
ggaggtccaggggaaatgggtgccgtgggagatcctggcgttcagggagaacctggtgac
cctgggatgttaggttttgacgggtttccgggcccaagaggtgaccgaggggacaatgga
actgctggttcacctgggttctccggtgaacctgggcctcctggggcgaaaggcgaaaaa
ggcgtagactcaatggacgtaggaccgaagggagatgagggggacccaggacttatgggt
gctatgggaccccagggaccaaaaggagacgccggacctcaaggtgcacccggggttgtg
cagggtcccaagggagacgacggtcttccaggtataccatccactatcaaggggaaaagg
ggtgtggacggtgccgcagggaaagtgggtgcaaaaggcttccctggtcaaagaggtgaa
cctggccaagcgggacccatcggaatcggtggcaaatcagcgacgggcgaaggatttcat
gtggtggttcacagtcagtcaacagccataccagactgtcctcttaacttgactcgactc
tggactggatacagcttgctgtatgtacagggacatgacaattcacatggtcaggatctt
ggcgcatcgggctcatgcatgaggcgttttaccacaatgccttacctattctgcaacgtc
tatgatcaatgtcactacgcctctaggaatgactatagctattggctcactaccgagata
agcatgcccatgatgcccgtaagcgcatctgctgtggagccttatgtcagccgatgtgcc
gtttgcgaaactccgggacctgtagtggccacacacagtcagtcgacagagaaaccgaat
tgtcccccgggatgggaagcgatctggacaggatacagctttcttatgcacactggggcc
ggtggcagtggatccggccaagctctttcctcacctggctcgtgtcttcgtgttttccgc
cacaacccattcttcgaatgtcacggccgcggaacctgtcattattttgccaataaatac
agcttctggctgtctactgtcaaggaaatgtttgtgtcaaaacaggaacctgagactctt
aaagctgggagtcttctcactcgagtcagccgctgtgccgtttgctaccgtgtggcgcaa
aagaagagacgaagacgtcacgctttccccaatgatatacctcaactcagctcacgcacg
gcagcacagctcatggcccagagacagtcgtaa
DBGET
integrated database retrieval system
