Montipora foliosa: 137982585
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Entry
137982585 CDS
T10576
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
mfoo Montipora foliosa
Pathway
mfoo04382
Cornified envelope formation
mfoo04512
ECM-receptor interaction
mfoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137982585
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137982585
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
137982585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mfoo04147
]
137982585
00536 Glycosaminoglycan binding proteins [BR:
mfoo00536
]
137982585
Exosome [BR:
mfoo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
137982585
Glycosaminoglycan binding proteins [BR:
mfoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137982585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
137982585
NCBI-ProteinID:
XP_068685799
LinkDB
All DBs
Position
13:complement(22808832..22884282)
Genome browser
AA seq
1752 aa
AA seq
DB search
MRLSLRFVAFFTLCGWTLVYSPGTDATCQGCQSCIPKCIGPKGDRGDRGRTGQTGPPGLP
GFQGEEGLPGPRGYKGDQGQPGPVGAKGPRGRTGPPGLPGANGSPGFPGEDGPRGMMGDP
GCNGTKGDRGVAGNPGNPGTTGEKGLPGGVGRKGEKGDSARDVVGAKGDPGTQGPPGDSG
MRGDPGQDGPQGPTGERGDNGTKGVPGPKGDKGNRGEFLQLRGPQGDKGEKGVPGEKGAP
INFEELNQLNATVIKGPPGEPGEKGNAGPEGEKGEKGDQGAPGPDGLQGETGRQGDQGQK
GEQGDAGPPGERGADGEKGEMGPKGDQGSPGASGPVGQMGPQGEPGPAGNKGDPGPVGVG
PPGPSGPKGDTGPKGFPGVRGFKGSPGIQGPRGNDGPPGPKGSVGDPGPTGPPGGPGLPG
GTGMKGQRGNPGPQGDAGPPGEKGNRGITIEGRPGMEGKPGPRGDRGERGIRGFPGPPGN
STNGPPGPKGNPGPQGPAGDDGSAGATGEKGEKCGPCPVPPRGPKGDNGSAGEQGKPGSV
GPPGKPGLEGSKGETGGAGPSGRPGDAGKQGDAGDPGDQGPKGEKGQVFRITGDKGQKGE
KGLEGLPGERGATGNKGAIGNPGPKGGQGPRGNKGERGTDGRNGQGGEKGEKGQKGLRGT
PGDIVTGPKGINGSKGEPGKRGEKGTDGVKGAKGEPWNAAQGIANISSITMGPKGDKGSP
GPKGEKGQQGDTGMKGEKGANGTDGAKGDRGENGVGEPGTKGEIGRQGDAGGHGVKGDKG
VAGPTGPRGPPGPKGVQGVQGPKGNDGFPGRAGQPGMPGANGQRGEQGDKGDSGRDGTPG
EKGEKGDVGPIGVTGDRGSPGPRGTKGEPGMKGDSVTGPRGENGTHGPPGRPGQPGEPGA
AGEEGPKGRDGEPGPAGAKGDQGIAGDKGTAGELGPKGVKGEPGDIGEKGIPGIPGGRGE
KGDRGKEGPAGDSGPKGEPGIKGAIGPNGRPGFPGMRGSRGYKGEVGLPGLSNATVIPGP
KGDKGDPGPPGQSGRNGEDGFPGAQGEIGPRGPAGDKGNPGDPGIAGPPGPSGPQGANGQ
QGEPGDVGKTGPKGDRGMPGPAGEKGDRGDNGAQGVEGAKGDPGVPGVGVKGNKGDPGKE
GEAGERGIRGQKGDAGAKGQPGVPGPEGPPGDEGPQGPKGEKGSEGETTVVSGPKGEPGV
SGENGTDGANGQKGEQGPPGPAGQPGQKGDRGDNGEKGSEGQAGLPGAMGDPGEKGNPGE
KGQVGPAGPAGANGSRGVEGFPGVPGPQGDPGSPGENGANGEIGLKGEEGPKGAKGEPGD
IGIDGTPGPKGDPGAVGAVGPKGEPGNVGAPGANGKKGDQGPTGLQGEKGVQGFPGEDGS
QGPIGEKGSPGSFGVRGLKGEPGANGTRGQKGEPGVGLGQKGQKGEPGIDGLVGLEGEKG
PQGPAGPAGPRGPKGDSGAPGDNGLPGPRGDPGFDGIEGRTGPPGDRGLRGPDGSVGLPG
PPGEADFGFYVVRHSQTTNLPDCPLDTLSLWEGYSLLYVQGNERAHGQDLGQPGSCLPKF
STMPFLFCNINQNCNLASRNDYSFWLSSPEPIPMMPVSENDIKPFISRCRVCEAPAMVMA
VHSQSSMTPDCPENWERLWRGYSFLMHTSAGNDGAGQLLSSPGSCLEDFRTSPFIECHGR
GTCHYYGSTYSFWLSTITDAEQFRIPEPKTIKSGNQKEYVSKCAVCMKKAYVNNGNGNGN
GLDPINVGDLPN
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atgcggctttctttgcgttttgtcgcttttttcactttatgcggctggactttagtgtat
tctcctggcacggacgcaacgtgtcaaggttgccaatcttgtattccaaaatgtatagga
ccaaagggtgacaggggagacagagggagaacagggcaaacaggtccacctggtttacct
ggctttcaaggagaagaaggtcttccaggaccaagaggatataagggagatcaaggacaa
cctggcccagtgggcgcaaaaggccccaggggaagaactggaccccctggtcttcctggt
gcaaatggcagtccaggatttccaggtgaagatggaccccgtggtatgatgggagatcct
ggatgtaatggaaccaagggtgacagaggtgttgctggaaatccaggaaatccaggcaca
acaggagaaaagggcttgcctggtggtgtgggaagaaagggtgaaaaaggagattctgcc
agagatgttgttggagcaaagggcgatccagggacccaaggacctccaggagattctgga
atgcgtggagatccaggacaagatggtcctcaaggaccaacaggagaaaggggagataat
gggactaaaggtgttccaggaccaaaaggagacaagggaaaccgaggagaatttctccag
cttagagggccacaaggggataagggtgaaaaaggtgttcctggagaaaagggagcgcct
ataaactttgaggaattaaatcaactgaatgccactgtaatcaaaggtccacctggtgaa
cctggagaaaagggaaatgcaggtccagaaggtgaaaaaggagagaaaggagatcaggga
gcccctggtcctgatggtctccaaggagagaccgggcgacaaggtgatcaaggccagaag
ggtgaacagggagatgctggtccacctggagagagaggagctgacggagaaaagggagaa
atgggccctaaaggagatcaaggctcaccaggtgcttctggacccgtgggacagatgggc
ccacaaggtgaaccaggaccagctggcaacaagggagacccaggtcctgtaggagttggt
cctcctggtccaagtggaccgaagggggacacaggccccaagggtttcccgggtgtcaga
ggattcaaaggatcaccaggcattcaaggcccaagaggaaatgatggtcccccgggaccc
aaaggatctgtaggggaccctggaccaacaggaccacctggtggacctggattaccaggt
ggaacaggcatgaaaggacagcgtggaaatcctggtcctcaaggagatgctggcccacct
ggtgaaaagggtaataggggcataaccattgaaggccgcccaggtatggaaggcaaacca
gggccacgaggtgacaggggtgaaagaggcatcaggggattcccaggacctccaggtaac
agcacaaatggacctccgggtccaaaaggaaatccagggccacaaggtccagcaggtgat
gatgggtctgcaggagcaacaggagaaaaaggtgaaaaatgtggcccatgccccgtacca
cccaggggacccaagggagataatggtagtgctggtgaacaagggaagccagggtcagta
ggaccccctggaaaacctggacttgagggaagtaaaggggaaactggtggtgctggaccc
agtggaagacctggagatgctggaaagcaaggcgatgctggggatccaggagatcaagga
cctaaaggtgaaaaaggacaggtctttagaataactggtgacaagggacaaaaaggagaa
aaaggcctagagggcctaccaggggagcgaggagccacaggaaacaagggtgctattggg
aaccctggaccaaaaggtggtcaaggaccccgtggaaacaagggtgaaagaggaactgat
ggcagaaatggtcaaggtggagagaagggagagaaaggacagaagggtctgagggggaca
ccgggagatatagtaactggaccaaaaggaattaatgggtccaaaggagagcctggtaaa
agaggagaaaagggaaccgatggagtgaagggtgctaaaggtgaaccatggaatgctgcc
cagggcattgccaatatttcgtcaataacgatgggtccaaaaggagataaaggaagccct
ggacccaaaggagagaagggacaacaaggagataccggcatgaaaggagagaagggagcc
aatggaactgatggtgccaaaggggacaggggtgagaatggtgtgggagaacctgggacg
aagggtgaaattggacgacaaggggacgctggaggccatggggtcaaaggagataaagga
gtcgcgggtccaactggcccaaggggaccccctggcccaaaaggtgttcaaggtgtacag
ggtcctaaaggaaatgatggattccctggtagggctggtcaacctgggatgccaggtgcc
aacggacaacgaggagagcaaggagataaaggagattctggtagggatggcacaccagga
gaaaaaggggaaaaaggagacgtgggtccaattggagttacaggtgatcgaggctcgcct
ggccctcgaggcacaaaaggggaacctggaatgaaaggagactctgttactgggccacgt
ggagaaaacggaacccatggacctcccggtcgcccaggacaaccaggagaaccaggagca
gctggagaagaaggacctaagggacgtgatggtgaacctggcccagcgggagccaaagga
gatcaaggcattgctggtgataaaggcactgctggtgaactaggacccaaaggcgtcaag
ggagaaccgggagatattggagagaaagggatccctggaatcccagggggacggggtgaa
aaaggtgacagaggaaaggaaggaccagccggtgattcaggtcccaagggagaaccaggt
atcaaaggtgcaatagggccgaacggaagacctggtttcccagggatgagaggttcacgt
ggttacaaaggtgaagttggtctccctggattatccaatgccacagtcatcccaggacca
aaaggagacaagggggatcctggtccacctggtcaatctggacgaaatggtgaggatggc
tttcctggtgctcaaggagaaatcggacctcgtggccccgctggagacaaaggtaatcct
ggtgaccctggtattgcggggccccctggtccttcaggtccccaaggcgccaatggacag
caaggagagccaggggacgtagggaaaactggacccaaaggagatcgtggtatgcctgga
ccggctggagagaaaggagatcgtggggataatggagcgcaaggagttgaaggtgcaaag
ggtgatccaggtgtaccaggtgttggagtgaagggaaacaagggcgaccccggcaaagaa
ggagaagcaggagaacgaggcataagagggcagaaaggagatgcaggagcaaaaggtcaa
cctggtgtacctggacctgaaggccctcccggcgatgaaggtcctcaaggtcccaaaggc
gaaaaaggaagcgagggtgaaacaacagtagtgtccggtcctaagggagaacctggcgtt
tctggtgaaaatggaacagatggggctaatggacaaaaaggagaacagggaccacctggt
ccagcaggccagcctggacaaaagggggacagaggtgacaacggtgaaaaaggctcggaa
ggccaagctgggctccctggtgcgatgggcgatcctggggaaaaaggaaaccctggtgaa
aaaggacaggtgggaccggctggacctgctggcgcgaacggaagcaggggcgttgagggt
tttccaggtgttccgggaccccaaggagatccagggtcccctggagaaaatggagcgaat
ggggaaattggtttgaaaggagaagaagggcctaaaggagccaaaggagaaccaggagat
attggaattgatggaaccccaggaccaaaaggagatcccggtgccgtcggagccgtgggc
cctaagggcgaacctggcaacgttggtgcacccggtgcaaatggtaagaagggagaccaa
ggtccgacaggccttcaaggagaaaaaggagttcagggtttccctggggaagatggatca
caaggtcctattggagagaaagggagtcctggaagctttggtgttagaggattgaaagga
gaacccggagcaaacgggactcgtggccagaagggtgaaccaggagtcggtctgggtcaa
aaagggcagaagggtgaaccgggcatagacggccttgttgggcttgaaggcgagaaaggt
ccccagggaccagcgggaccggccggacctcggggacccaaaggggattccggggcacct
ggagataatggattacctggaccgcgaggggatcccgggttcgatggtattgagggtaga
acaggacccccgggcgatagaggactgcgaggacctgacggcagtgttggacttccgggc
ccaccgggtgaagcggatttcggattctatgtagtaaggcatagccaaactaccaacctc
cccgattgcccgttggataccctttccttatgggaaggatacagtttgttatacgttcaa
ggcaatgaacgcgcccatggacaagacctgggacagcccggctcatgtctgccgaaattt
agcaccatgccgtttctgttttgtaacatcaaccagaactgcaacctggcgtcgagaaac
gattacagcttttggttatcctcgcctgagccaattcctatgatgccggtttcggagaat
gacatcaaacctttcattagccgctgccgagtgtgtgaagctcccgctatggtaatggct
gttcacagccagagcagcatgacacccgattgtccagaaaattgggagaggctttggaga
ggttacagcttccttatgcacacgagtgccggcaatgatggagcgggccagttactgtca
tctccaggctcttgccttgaagacttccgcacatctccgttcatcgaatgtcacgggcgc
ggaacgtgccattattacggaagcacctacagcttttggcttagcactataacagatgcg
gagcagtttagaataccagagccaaagactattaaatctggcaatcaaaaggaatatgtc
agtaaatgtgcagtttgtatgaagaaggcttacgtcaacaatgggaacggcaacggaaat
ggcttggatcctataaacgttggcgacttgccaaactga
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integrated database retrieval system
