Montipora foliosa: 137983346
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Entry
137983346 CDS
T10576
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9-like isoform X1
KO
K18735
protein SMG9
Organism
mfoo Montipora foliosa
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
137983346
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
137983346
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
GBP
MMR_HSR1
VapE-like_dom
NB-ARC
AAA_21
YobI-ATPase
AAA_16
AAA_14
RsgA_GTPase
AAA_29
AAA_18
Motif
Other DBs
NCBI-GeneID:
137983346
NCBI-ProteinID:
XP_068686649
LinkDB
All DBs
Position
13:19493805..19512932
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AA seq
485 aa
AA seq
DB search
MEDQDRGFRRGRGGRRRERGYRERSSRGKVEGAASGVQSSTPPMKTPIILTKPTADRGQE
TPVKQILIKPREPSQDPQTIASRPSGTPSAVRSKTLAVDHQSSHTSDRSAGGLQTHNIGG
VTASAATGTSSSIDAVSANLSSLKLGVPDHDRSPQLVKLLDENLQWNDSALEILVDQTDF
LVVGIVGPQGVGKSTILSTLAGANPFTDSRSPLFPVQSRQVQEDGTNQTCGMDIAVTQER
VILLDTQPLLSAAILDHLIHHDRNIPPEYTSPENYNEIQSLQIVTFLFTVCHVIVVVQDW
FTDLNIMRLLKTAEMLKPSSTSHATHESSGSPDDSDEQYPNIVFVYNKAAREDFHHENLS
SMLCVTSTMFQHSRLKLNSGISLLSSSLMPYRTLPTSYDDMNIYLLPLYQPHSGNGICTK
SPIYHGNPSFEMVLQALRNQIFSAHRHLLTHHSLTERNWFHFAARSWETVRKSSLISEYN
RLLCT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcaagacagagggttccgccgtggaaggggaggccgcagaagagaaagaggc
tatagagaaagatcttcaaggggaaaagttgagggtgctgcatcaggagtccaatcatct
accccaccaatgaaaactccaattatactgaccaagcctactgcagacagaggacaagaa
actccagtgaagcaaattttaataaaaccaagggaaccatctcaagatccacagactatc
gcaagtagacccagtggcacaccctctgctgtgcggagcaaaacacttgcagttgatcat
cagtcaagccacacatcagacaggtctgcaggtggcttgcaaactcataatattggtgga
gtgacagcaagcgcagcgacaggtacaagctcaagcattgatgcagtcagcgcaaaccta
agttctctgaaacttggtgttcctgatcatgacaggagcccacagttagtgaaactactt
gatgagaacttgcagtggaatgacagtgctttagagatcctagttgatcagacagatttc
cttgtggttggtattgtgggtccccaaggtgtaggaaagtcaactatcctgtcaacttta
gctggtgcaaatccttttactgactcaagatctcccttattccctgtacagtcaagacaa
gttcaggaagatggaactaatcagacttgtggtatggatatagctgtaactcaagagaga
gtgattcttctggatacacagccattattgagtgcagcaatcctggatcacttgattcat
catgatcgcaatattcctcctgagtacacttcaccagagaactacaatgagattcagtct
ttacagattgttacattcctgtttactgtctgtcatgtgattgtagtagtacaggattgg
ttcacagaccttaatatcatgaggcttttgaaaactgctgagatgttaaagccatcatct
acaagccacgcaactcatgaatcttcaggctctcctgacgattctgatgagcaatatcca
aacatcgtgtttgtctacaacaaagctgcaagggaagattttcaccacgagaatcttagc
tccatgctttgtgtcacaagcaccatgtttcagcactccagactgaagctaaacagtggt
atttctttgttgagtagcagcttgatgccttataggactcttccaacttcgtacgatgac
atgaatatctacctacttcccctttatcaaccccattcaggtaatggaatatgtaccaag
tcgccgatttatcatggaaacccaagcttcgagatggttctgcaggcgttgaggaatcag
atcttttcagcccatcgacatcttctcactcatcattcgttgacggaaaggaactggttt
cactttgcagctcgttcatgggaaactgtcagaaaatccagtctgatctcggagtacaat
agacttctttgcacgtaa
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