Montipora foliosa: 137984766
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Entry
137984766 CDS
T10576
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7-like
KO
K14409
protein SMG7
Organism
mfoo Montipora foliosa
Pathway
mfoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137984766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
137984766
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
137984766
mRNA cycle factors
Common to processing body (P body) and stress granule
137984766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
137984766
NCBI-ProteinID:
XP_068688143
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All DBs
Position
2:complement(62060652..62085135)
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AA seq
730 aa
AA seq
DB search
MAPILGSVPQVLRQAETLKAALKSSFDDFTVGSEGWQSRQRLQDLYKSILLTDLESALDK
KVEQDLWNCAFKSQIDFLRQQAKERKGTKKVEVQAVLTLFLEASSGFYIQLLQELCLTYR
LDIPGHVRSSQLGILEEINGNNCVTKKPHTQSCYYICQDCLVHLGDIARYCDDPDQAEVF
YHHALVLVPSNGQPYNQLAILASGKGDELGTVYYYCRSIAVKNPFPAASTNLQKTLSKVV
SRHNTRDVTQNISKAELGHIFLQFHGHVYLVQDLEEAKVLKDCILVALKGILKQNKFTSN
FLIKLVSITLFVLWNVKTGGADELEEFDCIGKDEEECLKLTLSFAVELFDVLVLSACESG
PSNEQSDVLPALNLLCQWFAAASPNTWNGDILKKAKIWEDFAALLNLLQVTYPHLPEKTD
LPLYEDWELQCFLPLRITQRKLTYSMKRTKPDDEVAHRVGRLVRFANRLVTSTPCILSKV
EDLATGLSQFSLKVNTSSPIEEISAQEDKFPKSPQDIDLESAGQKLLASLPTLNKATPVG
TPFAETSSLFKGPLDVGQSAASYVAPSPSTVAQYSLFQSGWNVPLTSAALAHQDQSSGRA
VVKPPNHHRATVVDPLAGSGGSTVYPPTLPSPQATENRRPTSFGTSFPSAGMQTNYASPS
QSPFGGFGFGGGWVGSGVWAPNGASGGGGSSPSGAHNLQSIWGSDFTPSEGMSPLQQLLQ
EQKKQQKEDT
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgatccttgggtcggtgcctcaagttttacggcaagcagagactttgaaagcc
gctttgaaaagtagctttgatgatttcactgttggaagtgagggttggcaatccagacaa
agattacaagatctatacaagagcatcctcttaaccgatctagaatctgcattagacaag
aaggttgagcaagacctgtggaactgtgccttcaaaagtcaaatagactttttacggcaa
caagccaaggaaaggaagggtactaaaaaggttgaagtccaagctgtattgactttattt
cttgaagcttccagtggtttttacattcagcttttacaggagttgtgcctgacatacagg
ctagatataccaggccatgtcagatcttcacaattaggcattcttgaagaaatcaacggc
aataattgtgtgacaaagaagcctcatactcagtcatgttactacatctgccaagactgt
ttggtgcatttgggagacatagctcggtattgtgatgaccctgatcaggctgaggtgttt
tatcatcatgctcttgtgttagttccttcaaatggccaaccatacaaccagttggctata
ctagctagtggtaaaggagatgaactgggaacagtgtactactactgtcgaagcattgct
gtaaagaatccattcccagcagcatccacaaatctccagaagacactgagtaaagttgtt
tcaaggcataatacaagagatgtcactcaaaacatatccaaggcagagttgggccacatc
ttcctacagtttcatggtcatgtttatcttgtacaagatcttgaagaggcaaaggttctc
aaagattgcattcttgttgctttgaaaggcatactgaagcagaacaaattcacttccaat
ttcctcattaaactggtgtccatcactttgtttgtgctgtggaatgtaaaaactggtgga
gcagatgaactggaagagtttgactgcattggcaaggatgaagaggaatgtttgaagctg
actctgagctttgcagtggaattgtttgatgtgcttgtactgagtgcctgtgagagtggg
ccctcaaatgaacagtctgatgtgcttccagctctcaatttgctgtgtcagtggtttgca
gctgcatcccctaacacctggaatggagatatcctcaagaaagcaaagatttgggaagat
tttgctgccttgcttaatctcttacaagtgacttaccctcatctgccggagaaaacagat
cttcctctgtatgaagactgggaacttcagtgctttcttcctcttcgaatcacccaaagg
aaactgacatacagcatgaagaggacaaagcctgatgatgaagttgctcacagagttggc
agacttgttaggtttgcaaatcggttggtgactagcactccttgtatcttatccaaagtg
gaagatctagcaactggactgtcccaattttctttgaaggtcaacacctcgtcaccgatt
gaggagatctcagcccaagaagacaaatttcccaagtcacctcaagacatcgatttagaa
tcagcaggacaaaagctgttggcttccttgcccaccttgaacaaggcaacacccgtagga
acaccatttgcagagacaagctcgctattcaaaggtccattagatgtcggccagtcggca
gcttcatatgtagcaccgtctccctccacagtagctcagtattcacttttccagtcaggg
tggaatgtacctcttacgtccgcggctcttgcacatcaagatcagtcatccgggagagct
gtcgttaagccaccaaatcaccaccgtgccactgtagtggaccccttggctgggtcaggc
ggaagcaccgtatacccacccaccctcccatctccccaagctacagagaaccgacggcct
accagctttggaactagttttccttcagcaggaatgcagaccaactacgcttctccgtcc
cagtctccatttggtgggtttgggtttggtggtggctgggtgggctcgggagtctgggct
ccaaacggtgctagcggcggcggaggatcaagtccctctggggcgcacaacttgcagtct
atctggggttcagacttcactccttctgagggcatgtcaccgctacagcagctattgcag
gagcaaaagaaacagcagaaggaggacacttga
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