Montipora foliosa: 137992407
Help
Entry
137992407 CDS
T10576
Name
(RefSeq) tetratricopeptide repeat protein 37-like isoform X1
KO
K12600
superkiller protein 3
Organism
mfoo Montipora foliosa
Pathway
mfoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137992407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
137992407
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
137992407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_14
TPR_1
TPR_17
TPR_19
TPR_CcmH_CycH
TPR_8
TPR_11
TPR_12
ARM_TT21_C
ANAPC3
TPR_9
Fis1_TPR_C
DUF7017
TOM20_plant
PerC
Motif
Other DBs
NCBI-GeneID:
137992407
NCBI-ProteinID:
XP_068693840
LinkDB
All DBs
Position
2:10960425..11017046
Genome browser
AA seq
1654 aa
AA seq
DB search
MATASRETKTFLRNARECIKNKEYKEALKYCKAVLKLDKTNYTALVFIGKCATELNQADQ
SLMAYKKAIESDETQPLAWQGLAALCEKEDDPKLNADLCEVYTKLLQFYEGEKTKWMEVA
TKLAKLYENQGDAQKAAERWEEIATLTEDKTEQFHIWSRIIEILEKRQSVGQENRNIKLK
AIYKKIVTCESLPEELHNQLERHYECYIKFLSKLQAGEEQGLLKEERSEINDAAKSMITL
FPRSKFALEFQGKDFLHSLVAAPTLEMSDLFQRLYHMYPESSVGAIGLGSVLLHQKDFAV
ARVLLQKGLQTFSDCPYGWLLLCEAQKSLHHYQGASNSAQKGLNCVKCSSHDVKKKLQRK
LSFSRADALLKQNPEGVVLAKEIYEELLKDVEGDEEVEILTGLGKVYLALGDVPQATQIC
AKALSIDKSFAGALALQGEISFHEGHFDDAELRFLEAIEKSRECALYYFLLGKLYWEMDE
NLRADKKKCLAQFLKAAKLDPNYCPSFLYLGHYYLKVLKDVSKASRCYQKAFDLDPDSED
AGAALGDSLTELGEEVAALNLYKNITAMSSPGKGKWAWLRLGLFHLKHNESTEAITCFQS
ALRADPKDRHCWECLGEAYMSRGSYTAAMKAFTKAAELDSSSLYCLYQLAAIKQLLSVHG
EAIKEYKLILEMQHDYVPALKGLGETYLNQARTAIEQNFNGKAVDCVLEAVGVLARAVQH
RPGLSCLWKLLGDCCTIIHPLANESLRGKIPDNLRKYVPGEPLEFQHKKEFLALGSSAYG
RALKLQPECGTLWGDLGFNSFQQAKILDGEDKKKMARRSLQAVKKGLSLQPSSHKLWNSL
GVVAASEEIKNPELSQHCFIMSIKTEPNNVIAWTNLGVLYMKHGKIELAHEAFKNSQALD
PSYAAAWIGQATIAEIIGSDEAMDLFRHTTELGSHSEGNIGYAHWVCSSLLPDKPSENHV
ILKGQPVPTLCHLHPECRKAVLQSATALSKYTDCIRNNAGAFNMYGLILENQRLFLQAEK
AFERAITLLQGSGSEDKQRHLNAVMINHARVLCSLGRYKESVARYQAVKPLKEFHDVCGL
ALSLFMASQLKESYKAYEQAFQLAETDTDRSCVITALGMLGYALNDKDAAKAMLFKSSQL
KPACNQGLMALCTLGLVNGDATLAGAALGELMRANNGSEVLNGHICYLYSRFYALQGNQK
LGRSHIMKAIHRNPSSSVLWSQLASYLLQACPDELEAAACCSESSARLGGSHSVEHNPAI
HPAGIVGSGALRNHDNKMAQIGASSRTRSGLIASQKAVHAHPNHLSSWAVLAASVTAHSI
ARNRERIGREKGILGARIAKFVQLIASAEINSLNLLCESQLPALVNWQTSQLESLRSWAI
IHHGYGSLYFGKLEDTANIVDQALPLYSSVPQISTQLHFLKAQVLLAGEEPVETGLNLLQ
TSLLSSPIHSPNVWQVLAEVQANQGSATAAELCYRQCLQAGMDSGSQSWRVIPLIRLALL
ALRQAQRETSDRDRWISLAFEASSEVLKLKIAFTVAYLIQGIVYFLQDNSRASKRALQHV
LDDPTVGGCAVAQYWLLLLHLKKKDLPAAQDLLAEATFVGNTRLDLLYYRVAENEEVASN
IRRRLIEKCIHINPSERLFLNSLRTYCVEGEMSD
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcgtcgagggaaacgaagacttttctgagaaatgccagggaatgcatcaaa
aacaaggagtataaggaggctctcaagtactgcaaggctgttttgaagctggataaaacc
aattatactgctctggtattcattggaaaatgtgctacagaactaaatcaagccgatcaa
tctcttatggcgtacaagaaggctattgagtcagatgaaacacaacctcttgcttggcag
ggtctagctgctctctgtgaaaaggaagatgatccaaaactgaatgctgacctgtgcgaa
gtttacacaaaattacttcagttttatgaaggtgaaaaaactaaatggatggaagttgca
acaaagcttgccaagctgtatgagaatcaaggtgatgcccaaaaggctgctgaaaggtgg
gaggagattgctaccttaactgaagataaaactgagcaatttcatatctggagtagaatt
atagagatcctggaaaagaggcaatcagtgggacaagaaaatagaaacataaagttgaag
gcaatttacaagaaaattgtcacttgcgagagtttgcctgaggaattacacaaccagcta
gaaagacactatgaatgttacataaaattcttatcaaaactccaggctggtgaagagcaa
ggcctgctcaaggaggagagaagtgaaatcaatgatgcagcaaaatctatgattacccta
ttcccaaggtccaaatttgccttggaattccaaggaaaagattttcttcattccctggtt
gctgcacccacacttgagatgtcagatttatttcaaaggctgtatcacatgtatccagag
tctagtgttggtgcaattggacttggcagtgtcttactgcatcagaaagattttgccgtg
gccagggtattattgcagaaaggtcttcagactttcagtgactgtccatatggctggttg
ttgctttgtgaagctcaaaaaagtcttcatcactatcaaggtgcttcaaacagtgcgcaa
aaaggtcttaactgtgtaaagtgctcttctcatgatgtgaagaaaaaactgcagagaaag
cttagcttttctagagctgatgctctactgaaacaaaacccagaaggagtggtacttgca
aaagaaatatacgaagagttgttaaaagatgttgaaggagatgaggaagtggaaattctc
actggtcttggaaaggtgtatcttgctcttggggatgttcctcaggcaacacaaatttgt
gcaaaagctttgagcattgataagagttttgctggagctctggcattgcagggtgaaata
agctttcatgaaggacattttgatgatgcagagttaaggttcttggaagcaatagaaaag
agcagagaatgtgcattatactactttctccttggcaagctatactgggaaatggatgaa
aacctcagagcagacaagaaaaaatgcctcgctcagtttctaaaggctgcaaaattggac
cccaattactgtccatcatttctttatttgggacattactacctcaaagttctcaaggac
gtgagtaaagccagcagatgttatcaaaaagcgtttgacctcgatccagattctgaggac
gccggggcagctttaggagattctcttacggagcttggagaagaggttgcggcacttaac
ttgtacaagaatataacagcgatgtcttcccctggaaagggtaaatgggcgtggctgcgg
cttggattatttcacttaaaacacaatgagagcacagaagcaatcacatgttttcagagt
gcgttgagggctgatcccaaagatagacattgttgggaatgtcttggtgaagcatatatg
agccgtggaagctacacagctgcaatgaaagcattcacaaaagccgctgaacttgattca
tcatcgctgtattgcctttaccagttggctgccattaaacagttgttgagcgtccacgga
gaagccatcaaagagtacaagttgattctagaaatgcagcacgattacgttccagcacta
aaaggacttggagagacttaccttaaccaggctcgtacagctattgagcaaaacttcaat
gggaaagcggtggactgtgtactagaggccgtaggtgttttggcgcgagcggttcaacac
agacctggtctctcttgtctatggaaacttcttggtgactgttgcacgatcattcaccca
cttgcaaatgaatccctcagaggcaagattccagacaacttaaggaagtatgttccgggt
gagcccctagagtttcagcacaagaaggagtttctagctttgggatcaagcgcttatgga
agggctttaaaattgcaaccagaatgtggaactctttggggagatctgggattcaactcc
tttcagcaagctaagattcttgatggagaagacaaaaagaagatggcccgtagatctctt
caggcagtgaagaagggtctttcattacagccttccagtcacaagttgtggaacagctta
ggagtggttgccgcctcagaagaaattaagaatcctgagctcagtcaacactgtttcatt
atgtccattaaaacagagcctaacaatgttattgcgtggacaaatctcggagtcctgtac
atgaagcatggaaaaatagagcttgctcatgaggccttcaagaattctcaagcgctggat
ccatcgtacgctgcagcttggatcggacaggccaccattgctgagattataggaagtgac
gaagccatggacctgtttcgacacacgacagagctgggatctcacagcgagggaaatatc
ggttatgcgcactgggtttgttccagcctcctcccggacaagccttccgagaatcacgtg
atactgaaggggcaaccagttcccactctctgtcatcttcatccggagtgccgcaaagcc
gtgctgcagtctgcaactgccctcagtaaatacacagattgtataagaaacaacgctggt
gcctttaacatgtatgggctgatactggagaaccagagactattcttgcaagcagaaaag
gcctttgaaagggcaataacattgcttcagggaagtggaagtgaggataaacaaaggcat
ttaaatgccgtgatgataaatcacgcgagagtgctttgttcgttgggccgctacaaggaa
tcagttgcaaggtatcaggctgtgaaaccgctgaaagagttccatgatgtgtgcggtctc
gcgctgtcattgttcatggctagccagttaaaagaaagctataaagcctatgaacaagca
tttcaattggctgagaccgatactgacaggtcatgtgttataacagcgcttggcatgctg
ggatatgcattgaatgacaaagatgcagccaaagcgatgctttttaagagttcacaatta
aagcctgcttgcaatcaggggcttatggcgctatgcactctcggcctggttaatggtgac
gctacattagctggagctgcacttggcgaactgatgagagcaaataacggaagcgaagtc
ctgaatggacacatttgttatctgtattctcgtttctacgctcttcagggaaatcagaaa
ctcggacgaagtcatatcatgaaagcaattcaccgaaatcctagtagtagtgtactatgg
agtcagttggcatcctatctcttgcaagcctgccctgacgaactcgaggctgcggcttgc
tgctcggaatcttccgcaagacttggtgggagccactctgttgagcacaatcccgcaatc
caccccgctggtattgtgggctcaggagccttgcgtaaccatgacaacaaaatggcccag
atcggtgcttcaagcagaacgcgctcaggtctcatagcttcccagaaggctgtgcacgca
caccctaatcacctgtcaagctgggcagttcttgcagcttctgttacagcgcacagcata
gcgagaaaccgagagagaattggaagagagaaaggcattctcggtgcaaggattgcgaag
tttgttcagttgatagcgtctgcggagataaattccttgaatcttctttgtgaaagtcaa
ctaccagcgcttgttaattggcagactagtcaactggaatctcttcgatcctgggccatt
attcaccatggttacggctcgctttactttggaaaacttgaggacacagctaatatcgtg
gatcaggcgttgcctttgtacagctctgttcctcaaatctccactcagcttcattttttg
aaggcccaggtgttactggctggtgaagaacccgtggaaactggacttaatttgctacag
acttctctgctttcgagcccaatccattcgccaaatgtctggcaggttttagctgaagtc
caagccaatcagggctcagctacggcagcggagctttgctatcggcagtgtctgcaggca
ggaatggacagcggatcacagagctggcgagttattcccctgatacgattggccttgctt
gctcttcgtcaagctcagagagaaaccagtgaccgagaccggtggatcagtcttgctttc
gaagcctccagtgaggtccttaagttgaaaatagcgtttactgtggcttatttaattcag
ggaattgtctattttctgcaagataattctagagcttcaaaaagagcacttcaacacgtt
ttagatgacccaacagtaggtgggtgtgctgtggctcagtactggcttctcttacttcac
ctgaagaaaaaggatcttccagccgcacaggaccttttggctgaagcgacattcgtagga
aatacccggttggatttattatattatcgagttgcagagaatgaagaagtcgcctccaat
attagacgccgtctaatcgaaaaatgcatccatattaatccatcagaacgcttgtttttg
aattccttaaggacctactgcgtagaaggagaaatgagcgattaa
DBGET
integrated database retrieval system
