Montipora foliosa: 137993079
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Entry
137993079 CDS
T10576
Name
(RefSeq) collagen alpha-1(V) chain-like
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
mfoo Montipora foliosa
Pathway
mfoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137993079
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mfoo00536
]
137993079
Glycosaminoglycan binding proteins [BR:
mfoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137993079
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
137993079
NCBI-ProteinID:
XP_068694837
LinkDB
All DBs
Position
2:complement(40945266..41000753)
Genome browser
AA seq
1620 aa
AA seq
DB search
MFPCLQGLGAAIVLSLLFVYDVSSLDGPSLQNTDGIADLVQEFQWTLHELNIETTGLCES
RPLPFSEDQRARDVAYDLSSTDTMINTTLDSLFPNGIPDEFVLFVTVKVQPDNREDLFTI
IDAEQSLSFSLNPVEFEYRRRGRNPLRVGVEENLADGAWHRVAFAVQRKHVELSVDCVKP
KVRVRKPKGFNPSFSQSAIVRLGGQFKGSLQQLLIAPDVFKVLSYCKDFTPDCDTPLPYA
PFLSGAAQQGSQPSVQIINNVRYIKGERGIPGTPGVAGPPGPKGSKGYDGERGNIGSQGS
PGPPGSAGPPGPPGPPGDGIFVRWSRLQGSNEKGPGPVAGGLVVEPPSVPGDPGVRGPRG
QRGSPGLPGEAGEKGSQGDPGSPGPPGNQGNRGPMGTSGKPGPSGPDGPRGPPGPIGEKG
DRGLEGIPGMMGHKGPRGLPGGRGEKGDKGEAGERGEPGVSGQSGVAGERGPQGETGPRG
PPGPRGLQGNTGDRGPPGPPGSTGPPGAPGIQGVQGMKGPPGPPGIPGPLGPIGPKGEAG
KIGLPGFPGADGVPGYPGIEGPPGPKGDRGAPGVRGPQGYPGLPGSKGNRGKRGPEGDKG
EEGLPGYPGGKGDEGPKGEDGAPGNAGPPGLEGSEGPKGRSGIPGPIGPPGPTGPKGESG
PPGLPGYSGEPGEKGNTGQTGPRGRDGPKGVRGNPGPPGSQGARGSRGPRGERGSPGTPG
TPGTKGQPGELGVSGDRGNPGPPGPQGDRGQPGTRGPTGLPGKPGLPGFPGPRGETGPQG
KTGPQGPPGMPGGRGPEGERGSPGPKGDRGRPGAQGLTGDPGESGKDGSKGEAGEPGVDG
KDGAPGQPGTPGPKGAMGPPGLSGLKGIEGPVGLPGAQGLQGMRGPPGQPGPQGSSGRPG
RQGPQGPAGEKGSRGEEGPRGEPGPEGKPGLPGKPGEDGLSGPPGEEGEKGAQGQAGIPG
KKGERGPKGPPGPSGAVGPPGKSGPTGPAGNPGPQGAPGPRGEKGNDGERGPPGPTGASG
APGVPGPRGQKGERGPSGPQGSQGLPGPRGPSGPAGGKGDQGETGDPGRDGRPGNKGEQG
PKGDPGAPGLPGTPGRAGLAGGKGDRGDPGPQGPSGQRGPAGLPGAKGPMGATGPPGPQG
SPGPQGPKGAPGPDGKDGQPGPPGARGPPGPRGDDGTPGTTGPPGEPGTRGFTGSDGDPG
DKGETGAPGPQGPTGQPGQPGARGDRGVPGERGTPGDSGEPGPQGPPGSQGPRGNPGPKG
EKGLQGAQGEKGDKGWPGFFGPTGVAGPVGDQGDQGPPGPRGFPGPKGDRGVDGPDGPPG
PSGQQGPRGRVGLQGTKGDRGSPGERGDAGNPGQPGPPGPPGDISSYLSRSYLVAPSRLE
TGTDKGNTRRRRSVDSADPDISESQGLIQSLRKEIESIKRPSGSQSNPARTCKDLYMCNG
KLQDGLFWIDPNYGCNGDAIQVFCNFTAGGQTCIHPDGNTKQAPNKKWKKLSGAEWFSEY
EDGYEISYSGVGRTQLNFLRLLSEKATQTFNVTCRGSQGCFDSKSNLVEKAIRLQGANDG
LLSLMKDDPSIKITQVRRDWKAVIQVETEDLSQMPIVDFAPGEFLTSNEFGFEVGPICFS
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgtttccctgtttacaggggctcggcgctgctatcgtgttatcccttctcttcgtctat
gatgtgtcgtctctggatggtccgtcccttcaaaatacagatggcatcgcggatttggtg
caggagtttcaatggaccttacatgaactcaatatcgagacgactggactgtgcgaaagc
agacccctgcccttctccgaagatcagcgggctcgggatgttgcgtacgatctgtcctca
acggacacaatgattaacacaactttggattcactgtttcctaatggcatcccagatgaa
ttcgttttatttgtcaccgttaaagtgcaacctgacaacagggaagacttgtttacgata
atcgacgccgagcaaagtctttctttcagcttgaatcccgtggagtttgaatacaggcgt
cgagggagaaatccattgcgtgttggagtcgaggaaaacttagcggatggggcgtggcac
agggtagcttttgcagtccagaggaaacacgtcgaattgtctgtagactgtgtgaaaccc
aaagttcgtgtgagaaagccaaagggattcaaccctagcttcagtcaaagcgctattgtt
agacttggtgggcagtttaagggctccttacagcagctgttgattgctccagatgtgttc
aaggttctctcctactgcaaggatttcacgccagactgtgatactccgttgccctacgca
cctttcttgagtggcgctgctcagcaaggttctcagcccagtgtacagatcattaataat
gtccgatatatcaaaggggagagaggaattcctgggactcctggtgttgcgggaccgcct
gggccgaagggctcgaaaggttatgacggagaaaggggaaacatcggatctcagggctcc
ccaggaccccccggttctgctggacctcccgggcctcctggaccccccggagatgggatc
ttcgttcgatggagtagactacagggatcaaatgaaaagggtccaggcccagtggccggt
ggccttgtcgtcgaacctccctcagtgcctggagaccccggagttcgtggccccagagga
caacgtggctcaccaggtcttcccggtgaagcgggtgaaaaaggatcccaaggagatcct
ggatcccctggaccccccggtaatcaaggcaatcgcggtcccatgggaacgtctggaaaa
ccgggtccctcaggacctgacgggccgcgaggaccccccggacccattggagaaaaggga
gaccgagggcttgaaggtattcctggcatgatgggacataaaggacctcggggtttacca
ggtggtcgtggcgagaaaggagataaaggcgaagctggtgaaagaggagaaccaggggtt
tccggacaaagtggagttgccggggagagggggcctcaaggagaaacgggacccagagga
ccaccggggccccgtggattacagggaaatacaggcgatcgaggtcccccaggtccaccg
ggatccacgggtcctccaggtgcaccgggaattcagggagttcaaggcatgaaaggaccc
ccaggtcctcctggtatcccaggccctctcggtcctatagggccgaagggtgaagctgga
aaaattggcttgcccggatttccaggcgccgacggtgtaccgggatatcctggaattgag
ggaccgccaggaccaaagggagacagaggtgcaccgggagtgagagggcctcagggatat
ccaggtcttcctggatcaaagggaaatcgagggaaacgaggacctgaaggagataagggc
gaagagggtcttcctggatatcctggcggcaaaggagacgaaggtccaaagggagaagat
ggtgcaccaggaaatgccggtcctccaggacttgaagggtccgagggaccaaagggtcga
agtggtattccaggccctataggccctcctggacctacaggaccaaagggagaaagcggt
cccccggggttaccggggtattctggagaacccggtgaaaagggtaatacaggacagact
ggaccaagaggaagggacggaccgaagggagtcaggggaaatccaggcccaccaggatca
caaggagcaagaggaagtaggggtccacggggtgagcgaggttcccccggaacgcctggt
acccctggaacaaaggggcaacctggcgaactaggtgtatccggtgacagaggaaatccg
ggacctccaggccctcagggggacagaggacaaccaggaactcgtggaccaacgggttta
ccaggaaaaccaggtttaccaggatttcctggaccacgtggagagacgggaccccaagga
aaaaccgggccacaaggccccccaggaatgccgggtggtcgaggtcctgaaggagagaga
gggtcaccaggcccaaaaggagaccgtggacgaccgggagctcaaggactgacgggagat
ccaggagaatcaggaaaagacggctccaagggagaagctggtgaaccaggcgtcgacgga
aaagatggcgctccgggtcaaccaggaactccaggacctaaaggtgcaatgggacctccg
ggactttctggactgaaaggaatagaaggaccagttggtctcccgggcgcacaaggattg
caaggaatgcgtggacctcctggacaaccaggtcctcagggatcatcgggaaggccaggt
cgccaaggaccccaaggacctgctggtgagaaaggttcaaggggagaagaaggacctcgt
ggggagcccggacccgagggaaaaccaggacttccgggaaaaccaggggaagatggactg
agcggaccaccaggagaagaaggggagaagggcgcgcaaggccaagcaggaatacctgga
aagaaaggagaaagaggacccaagggtcctccaggtccaagtggagccgttggtcccccc
ggaaaatccggacctaccggaccagccggcaatccaggcccccagggagctcctggcccg
agaggagagaagggaaatgacggagaacgcggaccaccaggaccgacaggagcttccggc
gctccgggcgttcctggtccacgaggacagaagggtgagcggggtcccagcggaccacag
gggtcccaaggattgcctggaccacgcggaccctccgggccagcagggggaaagggtgac
caaggggagactggtgatccaggaagagacggtcgaccaggaaacaagggtgaacaaggt
ccaaagggcgatccaggtgctccgggattaccaggaacaccgggtcgagccggtttagca
ggaggaaagggagaccgaggagaccctggaccacaaggaccctcaggacagcgcggccca
gcgggactaccgggtgcgaaaggacccatgggagcgactggaccaccgggaccccagggt
tctccgggcccacaaggtcccaagggagctccgggtccagatggaaaagatggtcaacca
ggtccaccaggagctaggggtccccccggtcctcgcggagatgacggcacacctggtacc
acgggacccccgggagagcctggtactcgcggtttcactggttcagatggtgatccaggc
gataagggtgaaacaggagctcccggccctcaagggccaactggccaacccggacaaccg
ggggcacgcggagacaggggggtccctggggagagaggaacgcctggcgattcgggagag
ccgggaccacaaggaccaccggggagccaagggcctcgtggtaacccaggtccaaaggga
gaaaaaggcttgcagggcgcacagggcgaaaaaggagataagggatggcctggtttcttt
ggtcctactggagttgcaggtcccgttggcgaccagggtgatcaaggtcctcctggtccc
cgtggattcccagggccaaaaggagacagaggtgtagacggaccagatggacctcctggc
ccatccggccagcaaggacccaggggaagagttggtttacagggcaccaagggagacagg
ggatcgcctggagagaggggtgacgcaggaaatccaggacaacctggacctccgggacct
ccaggagatatcagctcctacctaagtaggagttacctggtggcgcccagtagactggag
actggaaccgacaagggaaacacgaggcgccgcagatcagttgattcagcagatcctgac
atctcggagtcgcagggactcatccagtcccttaggaaggagattgagagcattaaacga
ccaagcggatcacaatcaaatccggctaggacttgtaaagatctctatatgtgcaatgga
aagctccaagatggtctattctggatcgaccccaattatggctgtaacggagatgccatt
caagtattttgcaattttacggctggtggacagacttgtatccatcctgatggtaacaca
aaacaagctccgaacaagaaatggaagaagcttagcggagcagaatggttcagtgaatat
gaagatggttatgagatttcttacagtggcgttggcaggacacaactgaacttcctgcga
cttttaagcgagaaagctacacagacattcaacgtgacctgccgtggatctcagggatgt
tttgacagcaagagcaacttggtggagaaggctatcaggctgcagggagcaaatgatgga
ctcctgtcactcatgaaggatgacccgagtatcaagatcacccaggtgcgcagggactgg
aaagcggtcatccaagtggaaacagaggatctcagtcaaatgccgatcgtggactttgcc
cccggagaatttctgacctcaaatgaatttggttttgaagtgggccctatttgttttagt
taa
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