Montipora foliosa: 137993409
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Entry
137993409 CDS
T10576
Name
(RefSeq) superkiller complex protein 2-like
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
mfoo Montipora foliosa
Pathway
mfoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137993409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
137993409
Enzymes [BR:
mfoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137993409
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
137993409
mRNA degradation factors
3'-5' decay
Ski complex
137993409
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
MTR4_beta-barrel
MTR4-like_stalk
DEXQc_Suv3
ResIII
Helicase_C
DUF3516
nSTAND3
Motif
Other DBs
NCBI-GeneID:
137993409
NCBI-ProteinID:
XP_068695347
LinkDB
All DBs
Position
2:49036105..49065284
Genome browser
AA seq
1317 aa
AA seq
DB search
MSRNLIPDYFDNKEGNGMKEKEANDECDPLEYEFDLLEIGCTGTIEVIPQSINKTSKKEL
KPLTTLPSGLPPLFAPDLKCDLEKYLLDPTSLPIHDFHKTQRFWPRERDSESLLFADVCP
VPSTLKVERNPTTGELLGYNEVMLTDTGSTAKNSMSLLRQPGPLSASVRGESTNYPFLPG
GMETQETSKAGLVLDGELNFEKDLLSMPPGFTTGVFFNDVKEGEEEEVIHLEKDLSTSTS
TPQVLAMADIMAGTTLEDLEYSDEEDELESDESDADEIPGKEESNVEQGDIIEGNAGDSL
ENVLVKEQASAGNKFTSAAPVTEKPVKQQWAVKINVTEPVKDFHKRVPNMAHKWPFELDT
FQKQAVLCLENNECVFVAAHTSAGKTVVAEYAIALANKHMTKTVYTSPIKALSNQKFREF
KDTFEDVGLLTGDVQIRPEASCLIMTTEILRSMLYNGSDTIRDVEWVIFDEVHYINDEER
GVVWEEVLIMLPAQVKIILLSATVPNTLEFADWIGRTKRKKIYVISTPKRPVPLEHFLYT
GNSNKTSNELFMIVDANSNFLTRGHEAAVAAKKAREGKSKDAYGPKSHQGTNIKEERNIW
LSLIEMLRKKEKLPVVAFTFSRKRCDENADQLGNLDLTTSTEKSLIHVFIKKCVARLKGS
DRDLPQVSRIQELLKRGLGVHHSGVLPIIKEMVEMLFGRGLVKILFATETFAMGVNMPAR
TVVFDSIRKHDGTNFRDLLSGEYIQMAGRAGRRGLDPTGTVILLCKGSVHLMADLHKMML
GKPTQLVSRFRLTYSMILNLLRVEELRVEDMMKRSFAEFHVQKDSQERKREMDELEKKLL
DIKELECTFCSEDLKYYFKTCKELSEVTRTVQAAILSSSHGQRALSPGRVVTINTAEHRN
ALAVILQAENSSNQGYSTIHSHRCSSPEERKFLVLVISDLHEQSPVNNVSAAPTPSVSST
AKEGLTEEIQPFVKRKLFLPEGRCSHRVMHVNGSEVSAISVRAMKVDTSKIIADHKKRMQ
PRFRNDPPGKTTISAEQELLRLSEANPEGLSTMDPVRDFNIRDIDMVTTIARKQSLEDTI
SNFKCLDCPKFTEHFKSIANQMRLREHVTTLRFLLSDESLQHREELRQRIQVLQRLRYVD
SNSAVQLKGRVACEISNHELMITELVFENAFTNLHPTEIVALLSCFVFQQRRCSEPELTK
TLKEGKERILSMAERIACLQSECGLITSVEEFKEQYRFGLVEAVFEWARGMPFAEITNLT
DVQEGIIVRCIQRLDETCRDVRNAARIIGDPRLGEKMEEASAMIKRDIVFAASLYTQ
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggaacttaattccggattacttcgacaataaggagggaaacggcatgaaggag
aaagaagccaatgatgaatgtgatccactggagtatgaatttgatcttctggaaattggc
tgcactggaacaatcgaggtcatcccacaatcaatcaacaaaacatcaaagaaagagctg
aagcctcttacaacacttccctctggtctgccacctttatttgctccagatttgaagtgt
gatttggagaaatatctcctggatcccacatcactgcccattcatgactttcataaaact
caaaggttctggcctcgtgaaagagattcagagagcttactctttgcagatgtctgtcca
gttccatcaacattgaaagtggagagaaatcctacaactggagagcttcttggttataac
gaggtcatgttgacagatactggttctacagccaagaattctatgtcccttttgcgacag
cctggaccactatctgcctctgtgagaggagagtcgaccaattatccctttttaccaggt
ggcatggagacccaggaaacttcaaaagcaggccttgttttagatggagaattgaatttt
gaaaaagaccttctatctatgccaccaggttttaccacaggagtgttttttaatgacgtc
aaagaaggagaagaagaagaagtcattcatttagagaaagatttatccacaagtacatca
acacctcaagttcttgctatggctgatatcatggctggaacaactcttgaagatctggag
tacagtgatgaagaagatgaactggagtctgatgaaagtgatgcagatgagattcctgga
aaagaagaatctaatgtcgaacaaggagatatcattgaggggaatgcaggagatagtctt
gaaaatgttttagtgaaggaacaagcctcagcagggaacaaatttacctcagctgctcct
gtcactgaaaaaccagtcaaacaacagtgggcggtaaaaataaatgtgacagaaccagtg
aaggattttcacaaacgtgtccctaatatggcgcacaagtggccgtttgaactggacaca
tttcaaaaacaagctgttctgtgtttggaaaacaacgagtgtgtattcgttgcagctcac
acctctgctgggaagacggttgtcgccgagtacgccattgccttggctaacaaacacatg
acaaagactgtgtacacctcccctatcaaagcgctatctaatcagaagtttcgcgaattt
aaggacacatttgaagatgttggtttgttgactggtgatgttcaaatcagacctgaggcg
tcttgtcttatcatgacaacagaaattctgcgttccatgctgtacaatggttctgacaca
ataagagatgtggagtgggtgatttttgatgaagtccattatataaatgacgaagagagg
ggtgtggtctgggaagaggtgctgatcatgctaccggctcaggtcaaaattattttgttg
tcggccacggtaccaaacaccctggaattcgcagactggattggccgcaccaagagaaag
aaaatctacgtcatcagcaccccgaagcgcccagtccccctggagcacttcctttacacg
ggcaacagcaataaaacgagtaacgaactgtttatgatcgtggatgccaatagtaatttc
ctgacccgcggtcacgaggctgctgtagcagcgaaaaaagcccgggaaggaaaaagcaag
gacgcgtatggccccaagtcacaccaaggtaccaacatcaaagaggaacgtaatatctgg
ctttccttgattgagatgctgcgaaagaaggaaaagctaccagtggtcgctttcaccttc
tcaagaaagagatgcgacgaaaacgcggatcaactgggaaatcttgacctcaccacatcc
acggaaaagagtttaatccatgtttttattaagaaatgtgtggcaagacttaaaggaagt
gacagagatctacctcaagtttccaggatacaagagctcttgaaacgtgggcttggtgtt
catcatagtggagtactgcctatcatcaaagagatggtggaaatgttgtttggaagagga
ctagtaaagattctgtttgctaccgagacgtttgcaatgggagtaaacatgcccgctaga
acagtggtgtttgattcaataaggaaacacgatggaactaactttcgagatctgttatcc
ggtgaatatattcaaatggctggccgcgcaggacggagagggctggacccgaccggaacc
gtaattcttctttgcaaaggcagtgtccatctaatggctgatctgcacaaaatgatgttg
ggcaaaccaacacagttggtttccaggttccgtctcacgtactccatgattctgaacctt
ttgcgcgtcgaagagctgcgtgtggaagacatgatgaaaagaagctttgcggagtttcac
gttcagaaagattcacaagaaagaaagcgcgaaatggacgaattagagaaaaagctgcta
gatatcaaggagctggagtgtacgttttgctccgaggatttaaaatactacttcaagact
tgcaaggagctgtcagaagtaacgcgaactgttcaggctgcaattctgtcttcttctcat
ggtcagcgggctctctctccaggccgtgtcgtcactataaataccgctgaacacagaaat
gcgctcgctgtgatattacaagcggaaaattcttccaaccagggctactcgaccatacat
tctcatcgatgttcaagtccggaagagaggaagtttctcgtcctcgtgataagtgactta
cacgaacaatcccctgtgaacaacgtttctgctgcgcccacgccaagcgtgtcttcaaca
gctaaagaaggccttacagaggaaatacagccgtttgtaaaacgaaagttatttttaccc
gagggacgatgttctcatagggtcatgcatgtgaatggaagtgaagttagcgctatttct
gttcgcgcaatgaaggtggatacaagcaaaatcatcgctgatcacaaaaagagaatgcag
ccgagattcaggaatgacccgcctggtaaaactaccatttcagcggaacaggagctacta
agattgtccgaggccaatcctgagggactgagtactatggatcctgtcagagattttaac
atccgggacatcgatatggtaacaaccatagcgcggaaacagagccttgaagatacaata
tccaacttcaagtgtttagactgtccaaagttcacagaacattttaaatctattgcgaac
cagatgaggttacgggaacacgtgaccacgctccgttttttgttgtcagatgaaagtctg
caacacagagaggaactgcggcaaagaattcaggtgctacagagattgcgttatgtggat
tccaacagtgctgtgcagcttaaaggaagagtagcatgcgagataagcaaccacgaactc
atgattacagagcttgtgtttgaaaatgccttcacgaatttgcatcccacggaaatagtt
gctttactgtcatgctttgttttccagcagcgccgttgcagtgaacctgaactaacaaag
acattaaaggagggcaaggagcgcatcttatccatggctgagcggatcgcctgccttcag
tctgagtgcggtctgatcacatcagtcgaagaatttaaagagcagtacaggtttggtttg
gttgaggcagtgtttgagtgggcgcgcgggatgcctttcgctgaaataacaaatctgaca
gacgtacaggaaggaattattgttcgatgtatacagcgattggatgagacgtgccgtgat
gtcaggaacgctgctcgtatcataggcgatccaagacttggcgagaaaatggaggaagcc
tctgccatgatcaaacgagacatcgtttttgctgcgagtctttacacacagtga
DBGET
integrated database retrieval system
