Montipora foliosa: 137993440
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Entry
137993440 CDS
T10576
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mfoo Montipora foliosa
Pathway
mfoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137993440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mfoo03041
]
137993440
Spliceosome [BR:
mfoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
137993440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
ASA1
WD40_MABP1-WDR62_2nd
PRP4
DSE1_N
Beta-prop_WDR75_1st
Beta-prop_WDR41
NBCH_WD40
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_NOL10_N
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_VPS8
CFAP251_N
Ge1_WD40
Beta-prop_SCAP
WD40_like
Beta-prop_WDR35_TULP_N
WD_LRWD1
DUF2110_C
Motif
Other DBs
NCBI-GeneID:
137993440
NCBI-ProteinID:
XP_068695390
LinkDB
All DBs
Position
2:complement(49762811..49782832)
Genome browser
AA seq
517 aa
AA seq
DB search
MSDDEDGSPLVKKPRIHFGSLETVEKERLAVGPSNDDKEKEDEEESEETSVSAAVLAGIR
AGNINISDGEYLELSEDQTSERHQELLAEFERRKKARAITVPTDDASVKARLRELGQPIT
LFGEGPPERRDRLRKLLSELGEDVPRREEEEKLKPKEELEEEVWYHEGPPELKVARMWIA
KYSLPRACERLKQMRIQQARPDPEKAAKTQELHRKLRGLNNFCSQIGDDRPLSYCQFSPD
SSMLATASWSGLCKLWSIPDCEPLAVLRGHNERVGSIVFHPEATLSLDETGPCMASCDAN
GAVLLWSLNMDTPLANIEGHEKRVSRVAYHPSGRFLASCCFDNSWRLWDLEQLKEVLHQE
GHSREVYNVAFQVDGSLVATCGFDGRGLVWDLRTGQCIMPLDGHLKKVLGIDFARDGYRI
ATGSEDQKIILWDLRKRQSIYTIPAHTNLISHVKFHDDYLTSASYDATIKVWSHPGWAPL
KTLTGHEQKISCVDVSPDGQYLVSSSFDRTFKLWSSD
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgatgaagatggatctccgcttgttaagaagccaagaattcattttggaagt
cttgagactgtagagaaagaacgcttggcggtcggaccgtccaacgatgacaaagagaaa
gaagatgaagaggagagcgaggaaaccagtgtatcggcagctgttctggccggaattaga
gcgggaaatataaatattagtgatggggaatacctggagttatcagaagaccaaaccagt
gagaggcatcaggagctcttagcagaattcgagcggaggaaaaaggctcgtgcaatcaca
gtacccacagatgatgcatcagtaaaggcacggctgagagagcttggccaaccaatcact
ttgtttggagaaggtccccctgagagaagagacagattaagaaaactcttgtctgaactt
ggggaagatgttcccagaagggaagaggaagaaaaactaaaacctaaagaagagttagaa
gaagaagtctggtatcacgaaggtccccctgaactcaaagttgcacgcatgtggattgcc
aagtactctttgccaagagcgtgtgagagactgaaacaaatgcgcattcaacaagccaga
cctgaccctgaaaaggctgctaagacacaagagttgcaccggaaattacggggtctgaac
aacttttgcagtcagattggtgatgacaggccactttcatattgtcagttttcaccagac
tcaagcatgctggctacagcatcttggagtggcttgtgcaaactttggtcaattccagac
tgtgagcccttagcagttctaagaggtcacaatgagcgagttggttcaatagtattccac
cctgaagctacattgtcgttagatgaaacaggtccttgcatggcatcctgtgacgcgaat
ggtgcagttcttctttggtccctcaacatggacacacctcttgcaaacatagaaggacat
gaaaagcgtgtttctcgtgtggcatatcatccctctgggcgatttttagctagttgctgt
tttgataattcgtggagattgtgggatttagagcagttaaaagaagttcttcatcaagaa
ggccactcaagagaggtttacaatgttgcttttcaagttgatggatcactggttgcaaca
tgcgggtttgatggaaggggactggtgtgggacttaagaactggtcagtgcatcatgccc
ctcgatgggcacttaaagaaagttcttggaatcgactttgctcgtgatggatatcgcatt
gcaacaggaagcgaggaccaaaagatcattttatgggatttaagaaagagacagagcatc
tacacaataccagcacacaccaacttaatctcacacgtcaagtttcatgatgactactta
acgtcggcctcctatgacgcaaccatcaaggtttggtcgcatccgggatgggcgccgctg
aagactctaacaggccatgagcagaagatcagttgtgtggacgtttcaccagatggacag
tatcttgtatcaagctcctttgaccgcacgttcaaactatggtcatccgactaa
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integrated database retrieval system
