Montipora foliosa: 137997601
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Entry
137997601 CDS
T10576
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG8-like
KO
K18734
protein SMG8
Organism
mfoo Montipora foliosa
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
137997601
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
137997601
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Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
DM4_12
Motif
Other DBs
NCBI-GeneID:
137997601
NCBI-ProteinID:
XP_068699779
LinkDB
All DBs
Position
3:complement(50926332..50954161)
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AA seq
1063 aa
AA seq
DB search
MADSGAKRASVEFFQYLINSTESCVDDKVCVVGIFGKDNIGFKSKAVHLNGTIGKEVFKI
DFLDSMFKKKDVHDFSCDIDVYHDVEQRIIYLHLVSVYDVSRMLQLCKQAPHDVQNAESH
QYWMSHEFYYACALMFLFSVSHIIVVLHPSQSFDLSYIRLFHTLASTRHQLLPQISQLLS
GVDGIPDIWRQTGRPCIPRLVCSLKQRVPFMNPSQMSGKNQDTYASKTKGKQQTTTPQKK
LQHAIEDQLYSIMKKARLLGSLSSSSLFTVNSSHAFVHVQPCSTAFDPVAVLLNTLAKPA
INTQWVESSPLLKNSKFLKREQDLSPGSSESLPSGNGQVLFKDYLKQQIDHLMTGDAGRD
GVAEGRRGTHVEVPSCRLWARVSLVLFEFFMTPKSDLIAPLTTMASHLDLDMKFSEARCR
KAIPVATSAYLEGLPSHYTQNVHLNQLSQALRVFSLHARGPAFEHYAAQFQDESNKVWMN
GRQLCEERSLTGRHCVYPYHRVPADGEPPTDPVSEESKDLGIIPCKPHSSRITSLCACNC
GRMQDHREDPFDLKAANVDFYQILEKKCCTSLVHLLFPLHPIFSFATTSNQDANEPAGDS
PVLEMTSDTGDPPGEEVVSGGGISDDQQANQGSDGEQVASPIVTTTAAVPIPNASKSGRA
ATVESQGHRASSTYGSSGYQSTLDMMSHEGPEFRSITSEFKSVVSLGIPGELSTVGSEDV
FSATDNAQGKGSDDMFSRQLTEKEQGFLETMLTTESPAGLYPRFPSWSLCRVGGSGGYNP
AKGLEQPGFFPNSNFLLAWDIPLLNDSQSDLTSQFDVQGTHFGSKQMTEEAWPTLNELPS
ASGTTLSSLPLYQALTYARRQSADYKGNAPPLVSSSNSGKGSASSSRQRGRATREGVVPT
VRAYIGEEYECPRGHRFICSGPDKMVKATSSGHVKETAHKLVTSDMPLYFPCPCRSSKPL
MAQMMRVFVVTPDSPVLVTLNPRVQPSIPPCPVFYPGIAAGLSLPPASFCVLRLPYVYVG
DDGPVLPPADSQPLLSCRVLKGMFSAMGHIQDNAKGNAVEAKR
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagcggtgcaaaacgagcaagtgtggagtttttccaatatttgataaattcc
actgaaagctgtgtggacgataaagtgtgcgtggtgggaatctttgggaaagacaacatt
gggttcaagtcgaaggctgtacatttgaatggcaccattggaaaagaggtttttaagatc
gattttcttgacagtatgtttaaaaagaaagacgtgcacgatttttcgtgtgatattgat
gtataccatgatgttgaacagagaataatatatttgcaccttgtatctgtttatgatgta
tcaagaatgttgcaactttgcaaacaagcaccacacgatgtgcagaatgcagaatcacat
cagtactggatgtcccatgaattctattatgcctgtgcgcttatgttcctgttttctgtt
tctcacattattgttgtcttacacccctctcaatcctttgatctgagttacatcagactc
tttcatactttggcttcaactagacatcagttgctaccacagatttctcagttgctctct
ggtgttgatggcattccagatatttggaggcagacagggcgaccttgcattcccagactt
gtatgctctttaaagcagcgtgtgccttttatgaacccatcgcaaatgtctggtaagaat
caagatacatatgcaagcaagacaaaaggcaaacaacaaaccaccaccccacagaaaaag
cttcaacatgctatagaagaccagttgtacagtatcatgaaaaaggcaagacttcttgga
agcctcagttccagctcgttgttcacagtcaactcaagccatgcctttgttcacgtgcag
ccttgttcaacggcctttgacccagtggcagttctgctcaacacattagccaaaccagct
ataaatacgcaatgggtggagtcaagccccttgctgaaaaacagtaagttcctcaaaaga
gaacaggatctgtcccctgggagcagcgagtctttaccatctggcaatggccaggtgttg
tttaaagattacctcaaacagcagatcgatcacttgatgaccggagatgctggccgtgac
ggtgtggccgagggacgccggggaactcatgtggaggttccctcttgtcgcttatgggcg
cgtgtgtctctggtgttgttcgagtttttcatgacgcccaaaagcgacctgattgccccg
ctgaccactatggcgtctcacttggacctcgacatgaagttttcagaagcacgttgtcgg
aaggcgattcctgtagcaactagcgcttacctggaaggtctgccctcgcattacactcag
aatgtgcaccttaatcagctctcccaagctctgcgcgtgttttctttgcacgcccgcgga
cctgcattcgaacactatgctgcccagttccaagacgaaagcaataaggtttggatgaat
ggaagacaactttgcgaagaaagaagtttaacaggacgccattgtgtatacccgtatcac
agagttcctgcggacggagagccgcccacggacccagtctctgaggagtcaaaagatttg
ggaatcattccatgtaagcctcactccagtcgcatcacgagtctctgtgcctgtaactgc
ggaagaatgcaggatcaccgagaagatccatttgatcttaaggcggccaacgttgacttt
taccaaatcttagaaaagaagtgttgtacttccctggttcatttgttgtttccacttcat
cccattttttcgtttgccactacatcgaaccaagatgcaaatgaaccagcgggtgattcc
cccgtcctggaaatgacatcagatacaggagacccgccaggagaagaggtcgtatccggg
ggtggtattagtgatgaccaacaggcaaaccaggggtccgacggcgaacaggtagcttct
cctattgttacgacaactgcggccgttcccattcccaacgcaagtaagagcggtagggcg
gcgactgttgagagccagggacacagagccagttctacgtatggttcaagtgggtatcag
tctactctcgacatgatgagccacgaggggcctgagtttagaagcataacttccgaattt
aaaagtgtcgtttccctggggattcctggggagcttagcacggtaggctctgaagatgtg
ttttcagccactgataatgcgcaaggcaaaggttcagacgatatgttttcgcgccagctc
actgaaaaagaacagggctttcttgaaaccatgctaaccaccgagtctcccgccgggtta
tatcctcgttttccttcgtggtccctttgtcgtgttggaggatcgggcgggtacaatccc
gcaaagggcttggaacagccaggcttttttccaaacagcaactttttgttggcttgggac
attcccctgctgaacgacagtcagtcagatttaacaagtcaatttgatgtacaagggacg
cattttggttcgaagcagatgacggaagaggcctggccaaccttaaatgaacttccttct
gccagcggtactactttatcatcacttcctctttaccaggccctaacctatgctcgccgc
cagtcggcagattacaaagggaatgcaccgcctttagtgtcaagttcgaattcaggaaag
ggctcggcaagttcctctcggcagcgtgggagagcaacgcgcgagggagttgtaccaact
gtgagagcttacataggagaggagtacgaatgcccacggggccataggttcatttgctca
ggccccgacaagatggtcaaggcaacaagctccggacacgttaaagaaacagctcacaag
ctagtgacatcggacatgcctctctacttcccgtgcccctgtcggtcgtccaaacctctc
atggctcaaatgatgcgcgtatttgtagtgacgcctgattcacccgttctcgtgacactt
aatcctagagtgcagccgtccatcccgccgtgtcccgtgttttatcccggaattgcagcg
ggcctgagcctcccacccgctagtttctgcgtactgagacttccgtatgtttatgtgggt
gatgacgggcccgttcttccgcctgctgattcccagcccctgttatcatgccgggtgtta
aagggcatgttctcagctatggggcatattcaagacaacgccaagggtaacgcagtggaa
gcgaagcgctaa
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