Montipora foliosa: 137997638
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Entry
137997638 CDS
T10576
Name
(RefSeq) nucleoporin NUP188-like isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
mfoo Montipora foliosa
Pathway
mfoo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137997638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
137997638
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137997638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup192
XLF_CC
Motif
Other DBs
NCBI-GeneID:
137997638
NCBI-ProteinID:
XP_068699833
LinkDB
All DBs
Position
3:complement(52198577..52281057)
Genome browser
AA seq
1766 aa
AA seq
DB search
MTCIELSNRGLWHIVTGRSSLQEPDQIAEELRQKKDRLLDGIAYYKEPNMQSAQALLKSS
NVKPKRKEFVTKISKFMNLDELQSLQLFGSYLENEFRGSKQQLLEMLKSQAQTEALLLKI
MDYYFEERLHILQCVKFLLSYWQDPKHPYREEFAECIEAIQDKDVLITKITDQYKSSCTS
IVSVQDTLGSSLHLKTKCAKWAQQYVREQILLLEILLLYYKEFVVPAKSLLELAKLFQSQ
GFGRKQVNRHLFEGQSDGLLLHIGYLQVLILIVSMDLESLRKLMQEDSSSRHHLVQDKDK
LKALDEVFISWGDQPHHGPVMLAWAVFRFVTVDAAQEQFVRKIGSKALQCSVFQYLLGLL
KSEEISRSSPVSNTCKSLIYGLMVVVLALFHEDTLGDLQLLVSVLSQTLTEKGLCLDFWD
SDLSTGVGLLLNSARSWFPLQFSPLLELLKSLAGDQESATKVYEFLDCVTSYTELLRENK
LGDVDCSGDKKIWRIVTPRLLYKKILSSDSQELVMPTGTTGKVAALDEGPAIIQWNYRYS
CWKLFVLEIESFLESVGSGTALDGENVICIVELVQEILHNDWSKALHLRPVVSRLYMIVQ
RCAVSPHPPLHLIATCLSCLATAAIKDPQQVWHHLQQTSFLPRCVFVKLSEADKTKVEFL
STAPGNFGSLLSTKERPMGCYPVTMATLNLLLKLIQGISVAEDSDSQPINFLDLAACIVF
VIREIFTGFHKWRYAGVKDREEIGSRSLQLFNVVLGLHFKHTKDTRSEMELEITDLSRTP
TVLQDSLIPCLLYTEAGQSLLNILGTGVDTVDRLVSLGSSSTGGYALALVELIKLAFSVL
NRLLARKGENDEISPLEEALTTQVVHQLKDKGQNYSTSWGHCQLVTVIASYIYHRLDSQL
PTLATLLLKRMCVVAPMSMHASFGAEAAPLRDAFVSRLKTLTEDVKLKVVILEFISTAVE
TQPGLVELFLDLSSKENKEFVIGQNSCLHAVLDFIDPEKQAGHYIPAQLVSAAYLVLFSL
WLDRRDAALTAVRKSPKFWENLTHPLLSGIRSDLEEDYRYHLEICCYAFQIIALETYYVA
RGQIDGGLKTSMGAFCSKQRYPYWGKFLKASEPNPLDAGLQNQAEQFEDEKLKLLKAWRT
FLLVCSSFQAEVFGLNESARRRGILDDTLQGLKSQVSRHVTVISISAAGEVCSLFLMLLK
RWKSCLQDLNPVFQCLVDVTEIAHRSDTQLFVHIRVAMFSSISVLLQHARCELLSDTLNR
SYAMALLPLACEPLEYLRGRFTSHEKEQDRVLELSVFIIDEILNILLANPGQWLPVLREH
ALFASLVQALDVCIKTREKVEFTEAILHLFLSLSRIPMSAEALALNGLSQPLCLGLATLS
YSSEREQQAPLSNSIAQTQPEKRPRSWRRVWQLALAVMGSMLRTLRHGFLQEALDFAGVH
RERLVEAMNGVRRSQSSDVLTEAEEVSGFLLELGHFFHEWRFALPDVLNLLQTRIGVLCQ
SCVALLTHPRLLAHLLEMSKGSSVQSNKPQSADMSLSLSGSFSREMLRTYSYADDDTFRN
SPLVSQTQSQLFKILCNSLAMLRHFTPDICGILFDQGMDLDSFPSLLSLGFSSPTVDHEE
PLSFGTLLACLNMALSNLGPPDLKSPVKSPVRTLSESLPRSSLMFTMENALIVTLSQACR
FLRDPALDPRVKQFLKRELGSELGNFLGGLFRHFVRRGLPPSPAGSAQTSPSSSARRTPT
KAPAFTEAPEQKFFKFADTFVKQVLR
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgacttgcattgagctatcaaaccgcgggctatggcacatcgttactggacgttcgtcc
cttcaggagcccgatcagatagcagaagagctgagacagaagaaagatcgccttcttgat
gggattgcatattataaggagccaaatatgcaatcagctcaggctcttctgaagtcttca
aatgttaaaccaaagaggaaagaatttgtcacaaaaatcagcaaatttatgaatcttgat
gagttgcaaagtttacaactttttggcagttatcttgagaatgagtttagaggatctaaa
caacaacttttggaaatgttaaaaagtcaagctcagactgaagcccttttgctcaagata
atggattactacttcgaagaacgtcttcacattctgcaatgtgtcaagttcttgctaagt
tactggcaggatcccaaacatccttacagggaagagtttgcagagtgtatagaagcaata
caagacaaagatgtcctgataacaaagattacagaccagtataaatctagctgtaccagt
attgtgtcagttcaggatacattgggatcttcattgcacttgaagacaaaatgtgcaaaa
tgggcacaacaatacgtgagggaacagattttgctcttggagatactgcttctctactac
aaagagtttgtcgttccggccaagtccttgctcgagctagcaaagttatttcagtctcaa
gggtttggaaggaagcaagttaacagacatctgtttgagggacaaagtgatggccttctt
cttcatataggctaccttcaagtgttgattctgatagtttcaatggacttggagagttta
cggaagttgatgcaagaggatagttcttcaaggcatcatcttgttcaagacaaggacaaa
ttaaaggcactggatgaagttttcataagctggggagatcagcctcaccatggaccagtc
atgttggcctgggctgtgttcagatttgttactgtggatgctgctcaagagcagtttgtt
agaaagattggcagcaaggctctgcagtgctctgtttttcaatatttgctggggctttta
aaaagtgaggagatctctagaagctcgcctgtgtcaaacacttgtaagagtcttatctat
ggactgatggtggttgtcttggcgctgttccatgaagacactttaggagatttgcagctt
ttggtgtctgtcttatcacaaactcttactgagaaaggactctgtctagacttttgggat
tcagatctaagtactggtgttgggcttcttttaaactctgccaggagctggtttccactt
cagttttctcctctgctagaacttctcaagtctcttgctggcgatcaagagtctgcaacc
aaggtgtacgagttcttggactgtgtgacatcgtacactgaacttctgagagaaaacaag
ttgggggatgtagactgctcaggtgacaagaagatatggaggattgttactccaagactc
ttatacaagaaaatcttaagttcagattctcaagagttggttatgcccaccggtacaaca
ggaaaagtggcagctttggatgaaggacctgcaatcattcagtggaattatcgttactct
tgctggaaactgtttgtactggaaattgaatcatttcttgaatctgtgggttccggaacg
gctctggatggtgaaaatgtgatttgcattgtggaattggtccaagaaatcttacacaat
gattggagcaaagcacttcatctgaggcccgtcgtttctcgcttgtacatgattgttcaa
aggtgtgcagtatcacctcatccacctctgcatttgattgccacttgcctgtcatgtcta
gctacggctgctattaaagatcctcaacaggtgtggcatcaccttcagcagaccagcttt
cttcctcgttgtgtttttgtcaagttgtcggaggcagacaaaaccaaagtcgaatttctt
agcactgcacccggaaactttggctcacttctcagcaccaaggagaggccaatgggttgt
tacccagtcaccatggcaacgttgaatctacttctcaagttgattcaagggatcagtgtt
gctgaggatagtgatagtcaaccgatcaactttctcgatctagcggcttgcattgtgttt
gtaataagggaaatatttacaggatttcacaagtggagatatgcaggagtaaaagataga
gaggaaattggttcaagaagtcttcagttatttaatgttgttcttgggcttcacttcaaa
cacactaaagacacaaggagcgaaatggagctggaaattacagatttgtcaagaactcca
acagtgctgcaagacagcttaattccttgtttattgtacactgaagctggacagtccttg
ctcaatattcttggtactggtgtggacactgtggatagacttgtttctcttggaagcagt
tcgaccggtggatatgccctggctcttgtagagcttatcaagctcgcgttttcagtgcta
aatagactgcttgccagaaaaggagagaatgatgagatttctcctctggaagaggctttg
acaacacaagttgttcatcagctgaaagacaaaggtcaaaactactccacaagctggggc
cactgccagcttgtcaccgtgatagcatcgtacatatatcacagacttgacagtcagtta
ccaactctcgcaacccttctgctcaagagaatgtgtgtggtggctccgatgtcgatgcat
gccagctttggagcggaagcagctcccttgagagatgcttttgtatccagactgaagaca
ttaactgaggatgtcaaacttaaagtggtgatactggaatttatatccactgcagttgaa
actcagcctggtttggtcgaactgttccttgatttgtcctccaaggaaaataaagagttt
gttattggtcagaacagctgtcttcacgcagttttagattttattgatcctgaaaaacag
gctggccattatatacctgctcaactggtatctgcagcttacttagtgcttttttccttg
tggcttgatcggagagatgctgctcttacagctgttagaaagagccctaaattctgggag
aatttaacacatcctttgttatctggaattcgctcagacctggaagaggattacagatat
cacctcgagatctgctgctacgcttttcagattattgctttggagacctactatgtcgca
agaggtcaaattgatgggggcttgaagacttccatgggagctttttgttcgaagcaacga
tacccctactggggaaaatttctcaaggcctcagaaccgaatccccttgatgccggtttg
caaaatcaagctgaacagtttgaagacgaaaagcttaaactacttaaagcctggagaaca
tttctgcttgtttgttcatcatttcaggctgaggtatttggtttgaacgaaagtgcgcga
aggaggggtatcttggatgatactctgcaaggattgaaatcacaggtttcaagacatgta
acagtaattagcataagtgcagccggagaagtttgcagtttgtttttaatgcttctcaag
cgatggaaaagttgccttcaggatttgaatccagtttttcagtgcttggtagatgtgacg
gaaatagcacacaggagtgacacacagttgtttgttcacattcgtgtcgcaatgttctcg
tcgatttcagtgctgctgcaacacgccagatgtgaactcttatctgataccttgaacagg
agttatgcaatggctctgcttccgttggcatgtgaacccctggagtacttacgagggaga
ttcaccagtcatgaaaaagaacaggacagggtcctggaactttccgtctttatcatcgat
gagattctgaacattttactggcaaatcctggacagtggcttcccgtactcagagagcat
gcgctctttgcgtctctcgtgcaagcattagatgtctgcatcaagactcgggagaaagta
gaattcacagaagcaattctgcatctgtttctttcgctctcaagaatacctatgagtgcc
gaagcgttagctttgaacggcttatcgcaacccctgtgtcttggactagcaacactgtct
tattcctccgaaagagaacagcaggctcctctgagcaattccattgcccagacccaaccg
gaaaagcgcccacgaagctggagacgagtctggcagctggctctagcagtgatgggatcc
atgctccgcacgctcagacacggcttcctccaagaagctctggattttgctggtgtccac
agagaaagactcgtagaggcaatgaatggagtaagacgatcacagtcatcagacgtgttg
actgaagcagaggaagttagcggctttttgcttgagctcggtcacttctttcacgagtgg
aggtttgctcttccagatgttttaaatctactacagactcgcattggcgttctttgtcaa
agctgtgtagccttgctgacccaccctagattgttggctcatttgctcgagatgtccaag
ggatccagtgttcagtcaaacaagccccagtcagcggacatgtcgctgtcattaagcgga
tccttttcaagagagatgctcaggacatattcgtacgctgacgatgacacattcagaaac
agccctcttgtttcccaaacacaatcacaattgttcaagatcttgtgcaactctctagcc
atgttacgccattttactccggacatctgcggaattctctttgatcagggtatggatttg
gattcctttccttccctcctgtcccttggtttcagttcccccaccgtagaccacgaggag
ccactgtcgtttggaacgctactggcttgtctcaacatggcgctctccaaccttggtccg
cctgacttgaagtctccggtgaagtcacccgtcagaactttatctgagtcactgccaaga
tcatcgctgatgttcacaatggagaatgccttaattgtcaccttgtctcaagcctgtcgg
tttttgcgggatcccgcccttgacccgagggtcaagcagttcctaaagagagagctcgga
agtgaattgggtaactttcttggaggcctcttccgccattttgtacgccgtggtcttccc
ccttccccggcgggatctgcacagacgagcccgagtagctccgccaggagaacaccaaca
aaggcaccggcttttacagaagcccccgaacagaagttcttcaagtttgcggacaccttt
gtcaagcaggttttgagatga
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integrated database retrieval system
