Montipora foliosa: 137999689
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Entry
137999689 CDS
T10576
Name
(RefSeq) exosome complex component RRP43-like isoform X1
KO
K12586
exosome complex component RRP43
Organism
mfoo Montipora foliosa
Pathway
mfoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137999689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
137999689
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
137999689
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
137999689
NCBI-ProteinID:
XP_068701645
LinkDB
All DBs
Position
4:complement(7471247..7482454)
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AA seq
275 aa
AA seq
DB search
MAADFKTAQPLEYYRKFLEENIRPDGRDLLEFRKTILNVGSISTAEGSALVKLGNTTVVC
GVKAEFAVPSQENPNHGYIVPNVDLPPLCSSRFRPGPPNEQAQVLSQFVADTISNCEPVN
LKDLSILEGKLCWVLYVDVVCLSYDGNITDASLIAAIAALKNTQLHAVTINEESQTPEPS
ETRDISLTIRNHPVAATFGIFDDSVLFADPTDEEEGLLTGVVTIVVTDDEKIAAVHKPGG
SPLPDHKFQECYKKAVTRGKEVRDLIQTACVDVDR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagatttcaagactgcacagcctcttgaatattacaggaaatttttggaggag
aatatcagaccagacggccgtgatctcttggaatttaggaagaccatcctaaatgttggt
tcgatatcaacagctgaaggatcggctttggtgaaacttggaaatacaactgttgtttgt
ggagtgaaggcggaatttgcagtgccaagtcaggaaaacccaaaccatggatatatagtt
cccaatgtagaccttcctccactttgttcatcacgcttccgtcctggaccaccaaatgaa
caagcgcaagttctcagccaatttgttgctgatacaatctcaaactgtgagcctgtcaat
ctcaaagacttgagcattttagaaggaaagttatgctgggtgctttatgtggatgtagta
tgcctgagttatgatggaaacataacagatgcttctctgatagccgccattgctgctctt
aaaaacactcaacttcatgcagtgacaataaatgaagaatctcaaacccccgagccatca
gagacaagagatatttcactgacaattagaaatcatccagttgctgctacatttggtata
tttgatgattcagtgttgtttgctgacccaacagatgaagaagaaggcctccttactggt
gttgtcacaatagttgtgacggatgatgaaaaaattgctgctgttcataaaccaggagga
tcgcctttaccagatcacaaatttcaagaatgttacaagaaagcagtaacaagaggaaag
gaagtcagagatctgatacaaacagcttgtgttgatgttgatagatga
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