Montipora foliosa: 138000221
Help
Entry
138000221 CDS
T10576
Name
(RefSeq) THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
mfoo Montipora foliosa
Pathway
mfoo03013
Nucleocytoplasmic transport
mfoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138000221
09122 Translation
03013 Nucleocytoplasmic transport
138000221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
138000221
03041 Spliceosome [BR:
mfoo03041
]
138000221
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
138000221
Spliceosome [BR:
mfoo03041
]
Complex C
Other components
EJC/TREX
138000221
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
138000221
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
PRR11_2nd
Motif
Other DBs
NCBI-GeneID:
138000221
NCBI-ProteinID:
XP_068702575
LinkDB
All DBs
Position
4:20059954..20099373
Genome browser
AA seq
1643 aa
AA seq
DB search
MAAMVVLSNAVKNWEKSGKDEVFRLCKNCVRSKDGELSDSHFQCGENDLKRVIYEVFCHV
IQGNLKHDDVVSLLSDVAEVHPGSSSLLADLFCILDVESQCAEDKPSRERFLSLVAASVG
VVPEALLKERLDVETLDTLGLIPSQKAFNQKYVRTKTKLFYKQQKFNLVREESEGYAKLV
TELGQEISRHVTSSRALENIKSLIGRFNLDPNKTLDVLLDSFECRIELEDFFLPLLKSFM
EKYESSALCHIMGFKFQFYKDQPDLPTPHSLFHLAALLIKHKLLQLDDLYLHLSPSDTDI
VASNETRIEDAKQEARKMNVAVLAEIAATSNDENSKDNNKENDKPTIVPDNQKFGICEAL
LVVGAWDHAQTILERLPQFAAVSHPAIASGLCKLIHTTVEPLYRRHSSKAARGRPYVPVA
GGPPQCKAFTDLPHSVFPMLLHLGPHLSTDPILMAKILRIGKGFMKDHPNVFEDKEQSSP
QIEKVWCGLLTLLDEVLLPSISLLECNSSLAEELWTMMCRFPYELRYRLYGQWKNESYLS
HPRMLLAKAATIKRAKYITKRLTKENVKPSGRQIGKLSHSNPGILFEYLLSQIQKYDNFI
GPVVDSLKYLTPLAYDVLAYCIIEALANPERERLKHEDTNISEWLKSLAVFCGTVFRKYS
IELTGLLQYVANQLKAGKSFDLLVLKEVVQKMSGIEISEEVTAAQLEALSGGELLRAEGG
YFGQIRNTKKSSQRLRDTLLEGKLDLPLCLLMAQQRNGIVFFEDSERHLKLVGKLYDQCQ
DTLVQFGGFLATQLSAEEYESHLPSLDVLGQSYHLTPDAAFFLSRPMFVHQIETKYEDLK
KAIETPKGKQLQQKQILQCYVDAVNVVMDPVFQSARLLQAPKVWNSISPQLYVTFWALSM
FDLYVPSERYEQELNKLRQQLTQLEDNKDMPVSKKKKEKERCSLLAEKLKEELRQQEERS
QRVMASLKNERDTWLPAKATKSETITQFLQLCMFPRCVFTASDAVYCAKFVHMLHNLKTP
NFSTLLCFDRVFSDISYTVASCTENEASRYGRFLCSMLEIVMRWHGDKKTYEKECGSYPG
FVTVLRATNNDKADHLDYENYRHVCHKWQYKLTKALVVCLESKDYTQIRNTIMVLTKILP
YYPKVLNLGQALERRIDKICEEEKEKRQDIYVLALGYAGRLKAKKRDMVVESEFHHKEKP
PPAATPPASQNEAVTVKQEKTETQSNSSVTAEPTSKATKNTDPEVKPKATVSIKKEPDSS
KSSSPSMTKSDSAPSSQKETSGKSATGSSSGKPSGTSTPSSTSSSRTGQGDSPSRSNASN
TKSLTTGNNSSQPVSKASSSSIASSKTTKTSSTVKTESNTNGNDAVPTSKKTDSSKQKVK
DKEKEKEKDKEANEKPKEKVKAEKTEKVKEQKSKEKEKERSKSKEKEGKDKVKERTKDKD
RERSGVKSKHLSPAVPESPRDGEYEKDAKRRKIDGISSSSSQENSPSRLGESDSFKSPEN
AERKTKVVEYEKEKTSKADRKRSSLEPVEGKEAKRRKDDSDANVAVSKSSSSYGSENKTK
VKGEPKVKLVRKAAPDASPPAKKEKDKDKDKDKDKEREKDKEGKTATSKKKESRHLEVKD
SEAKEDERSKKHHSRSASRSRRT
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggctgccatggtcgtcctatcaaatgccgtaaaaaactgggaaaaatctggcaaagat
gaagtgtttcggttgtgcaagaactgcgttcggagcaaggatggagagctgtccgattcc
cactttcagtgcggagaaaacgatctcaaacgtgtcatctatgaagtgttttgtcacgtc
attcaaggcaacctgaagcatgacgatgttgtgtccctgctgtctgatgtcgcggaagtc
cacccaggaagctcatctctgctagctgacctattctgtatcttggatgtggaaagtcaa
tgtgctgaggacaagccaagcagagaaagattcctgtctcttgttgcagcatcagtggga
gtagttccggaagctctgcttaaagaacgcctggatgtagaaacattggatacattagga
ctcattccatcacaaaaagccttcaatcaaaaatatgtcaggaccaagaccaagctattt
tataagcagcaaaagtttaatttagtgcgagaagagagtgagggttatgccaaactggta
actgaactgggtcaagagattagcagacatgttacaagctcaagggcactggaaaatatc
aagtcattgataggtcggttcaacttggaccccaacaagactttagatgttcttcttgac
tcatttgaatgtcgtatagaattagaagacttctttcttcctctgttgaagtctttcatg
gagaaatacgaatcgtctgctctttgccacattatgggattcaaatttcagttttataag
gatcagccagatttgcccactcctcactctcttttccatcttgctgcccttctcataaag
cacaaactgctgcaattggatgatctttatttgcatctgagcccttcagatactgacatt
gttgctagcaatgaaacgagaattgaagatgcaaagcaagaagcaagaaaaatgaatgtt
gctgtgctagctgaaatagctgctacaagcaatgatgaaaacagcaaggacaataataaa
gaaaatgataagccaaccattgttccagataatcagaaatttggcatttgtgaagcattg
ttagtggttggggcatgggatcatgcacagacaatactagaaagactgccacaatttgct
gctgtgtcacatcctgcaattgctagtggtttatgtaaacttattcatacaacagttgaa
ccgttgtatcggaggcattcttccaaggcagctcgtggacgtccctatgtcccagtggca
ggagggccacctcagtgcaaagcgtttacagatttgccgcatagtgtttttcccatgtta
ctgcaccttggtccacacctttcaacagatccaattctcatggctaaaatcctgagaatt
ggtaaaggcttcatgaaagatcatccaaatgtttttgaggataaagagcagagttctccg
cagattgagaaagtctggtgtggattgttaaccctgctagatgaagttctgctgccttca
atttcattactggaatgtaactccagtttagcagaagaactttggaccatgatgtgtcgc
tttccttatgaactcaggtatcgcctctatggtcagtggaaaaatgaatcttacttgagt
catccaagaatgttattagctaaagctgccacaattaagagagcaaaatacatcacaaag
agattgactaaagaaaatgtcaaaccttctggacgacaaattggaaaactaagccacagc
aatccaggcattctatttgaatatctgctttcacagattcaaaagtatgataacttcatt
ggacctgttgtggactcactgaagtaccttactcctctggcttatgatgttctagcttat
tgtatcatagaagctttggcaaatccagagagggagagactcaagcatgaagataccaac
atctcggaatggcttaaaagtttagcagtattttgtggcaccgtattccgcaagtattcc
attgagctgactggtcttctgcagtatgtagcaaatcagctcaaagctggaaagagcttt
gatttgcttgtgcttaaggaggttgtacagaaaatgtcaggaatcgagatatcagaagaa
gtgacagctgcacagttggaggctttgtcagggggagaattactcagagccgagggagga
tacttcggtcagattagaaacacaaagaagtcttctcagcgactccgcgacacactgttg
gaaggaaagttagatcttcctctttgtctcctgatggctcagcagaggaatggaattgtg
ttttttgaagattcggagcgacatctgaaacttgtgggaaaactatatgaccagtgtcaa
gatactttggtgcaatttggaggttttcttgccactcagttatcagctgaggagtacgag
tcacacctgccatcgctggatgtcttgggtcagtcgtatcatttaacgcctgatgctgca
tttttcctgtcaagacccatgtttgtccatcagatagagaccaagtatgaggatttgaag
aaggccatcgaaactcctaagggaaagcaacttcagcaaaaacaaattttgcagtgttat
gtcgatgctgtcaatgttgtaatggacccggtgtttcaaagcgcacggctcttacaagcg
ccgaaagtatggaatagcatcagccctcagctgtatgttactttctgggcgttatctatg
ttcgatctttacgtgccatctgagcgatacgaacaagagctaaacaaattgagacaacag
cttacgcaattagaagacaacaaagatatgccagtaagcaagaaaaagaaggagaaggaa
agatgctcgcttttggctgaaaagttgaaagaagaactcagacaacaagaggaacgtagc
cagagagtgatggcatccctgaaaaacgagagagacacttggctgccagctaaagcgaca
aagagtgagaccattacgcagtttcttcaactatgtatgttcccaagatgtgtgttcact
gccagtgatgctgtgtattgtgctaagtttgttcacatgctgcacaatcttaaaacgccg
aacttttcgacgctactttgctttgacagagtgttttcggatatttcatatactgtggcc
agttgtacggaaaatgaagccagtagatatggtcgctttttgtgttcaatgttggaaata
gttatgaggtggcatggcgataagaaaacttatgagaaggaatgcggtagctacccagga
tttgtgacagtcttgagagctacaaacaacgacaaggctgatcatttagattatgagaat
tatcgacatgtctgtcacaagtggcagtacaaactgacaaaggcccttgtagtctgttta
gaatccaaagattatacgcagattcgaaatacaatcatggttttaacaaagattttgcct
tattatcccaaagttttaaatcttggccaagctttggaaaggagaatcgacaagatttgt
gaagaagaaaaggagaagcgacaggatatttatgttctcgccttggggtatgctggtcgt
ttaaaggcgaaaaagcgagacatggttgtggaaagcgagtttcatcacaaagaaaagcct
cccccggcagctacaccgccagcgagccagaatgaggctgtgacagtgaagcaagagaaa
acggagacgcagtctaattcgtctgtgaccgctgagccgacaagtaaggcaacgaagaat
acggatcccgaagtgaaacccaaggccacagtgagtatcaagaaagagccagacagttcg
aaatcatcaagtcctagtatgaccaaaagcgacagtgcgccttcctctcagaaagagact
tctggtaaatctgccacgggatcctctagtggtaaaccatctggcacaagtacccccagc
agtacgtcttcctcccggacaggtcagggcgattcgccaagcaggagtaatgcctctaac
accaaatctttaacaacaggcaacaattccagtcaacccgtgtccaaagcttcctcttcc
tccattgccagctccaaaacaacaaaaacctcttccacagtcaaaacggaaagcaacact
aacggaaatgatgccgtacccacaagcaaaaagactgacagcagcaaacagaaggtgaag
gataaggagaaagaaaaggaaaaagacaaagaggcaaatgaaaaacccaaggagaaggtt
aaagcagaaaaaacagagaaggtcaaagaacagaaaagcaaagagaaagaaaaagagcga
agcaaaagcaaagaaaaagaaggcaaagacaaagtgaaggagcgcacgaaagataaagac
agggaacgatccggcgtgaaaagcaaacatttatcaccagcggttcctgaatctcctaga
gatggcgaatacgaaaaagatgctaagcgccgtaaaatcgacgggatctcgtcttcatcg
tctcaggagaattctccatctcggttaggcgaatctgactcattcaagagtccggaaaat
gcagagaggaaaacaaaagttgtggaatacgagaaagaaaagacctcaaaagcagatcga
aaaaggtcctcattagaaccagtcgaagggaaagaagcaaaaaggagaaaagatgatagt
gatgccaatgttgcagtctccaaatcgtccagctcatacggatccgaaaacaaaacgaag
gtgaaaggcgagcccaaagtaaagctcgtgcggaaagcagcaccggatgcctcgccacca
gcgaaaaaggagaaagacaaagacaaagacaaagacaaagacaaagaacgggaaaaagac
aaggaaggcaaaacagcgacaagcaaaaagaaagagtcgcgtcaccttgaagtcaaagat
tccgaagccaaggaggatgaacggtccaagaaacaccattccagatcagcatcaagaagt
cgcagaacataa
DBGET
integrated database retrieval system