KEGG   Montipora foliosa: 138000221
Entry
138000221         CDS       T10576                                 
Name
(RefSeq) THO complex subunit 2-like
  KO
K12879  THO complex subunit 2
Organism
mfoo  Montipora foliosa
Pathway
mfoo03013  Nucleocytoplasmic transport
mfoo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mfoo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    138000221
  09122 Translation
   03013 Nucleocytoplasmic transport
    138000221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mfoo03019]
    138000221
   03041 Spliceosome [BR:mfoo03041]
    138000221
Messenger RNA biogenesis [BR:mfoo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     138000221
Spliceosome [BR:mfoo03041]
 Complex C
  Other components
   EJC/TREX
    138000221
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    138000221
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2 PRR11_2nd
Other DBs
NCBI-GeneID: 138000221
NCBI-ProteinID: XP_068702575
LinkDB
Position
4:20059954..20099373
AA seq 1643 aa
MAAMVVLSNAVKNWEKSGKDEVFRLCKNCVRSKDGELSDSHFQCGENDLKRVIYEVFCHV
IQGNLKHDDVVSLLSDVAEVHPGSSSLLADLFCILDVESQCAEDKPSRERFLSLVAASVG
VVPEALLKERLDVETLDTLGLIPSQKAFNQKYVRTKTKLFYKQQKFNLVREESEGYAKLV
TELGQEISRHVTSSRALENIKSLIGRFNLDPNKTLDVLLDSFECRIELEDFFLPLLKSFM
EKYESSALCHIMGFKFQFYKDQPDLPTPHSLFHLAALLIKHKLLQLDDLYLHLSPSDTDI
VASNETRIEDAKQEARKMNVAVLAEIAATSNDENSKDNNKENDKPTIVPDNQKFGICEAL
LVVGAWDHAQTILERLPQFAAVSHPAIASGLCKLIHTTVEPLYRRHSSKAARGRPYVPVA
GGPPQCKAFTDLPHSVFPMLLHLGPHLSTDPILMAKILRIGKGFMKDHPNVFEDKEQSSP
QIEKVWCGLLTLLDEVLLPSISLLECNSSLAEELWTMMCRFPYELRYRLYGQWKNESYLS
HPRMLLAKAATIKRAKYITKRLTKENVKPSGRQIGKLSHSNPGILFEYLLSQIQKYDNFI
GPVVDSLKYLTPLAYDVLAYCIIEALANPERERLKHEDTNISEWLKSLAVFCGTVFRKYS
IELTGLLQYVANQLKAGKSFDLLVLKEVVQKMSGIEISEEVTAAQLEALSGGELLRAEGG
YFGQIRNTKKSSQRLRDTLLEGKLDLPLCLLMAQQRNGIVFFEDSERHLKLVGKLYDQCQ
DTLVQFGGFLATQLSAEEYESHLPSLDVLGQSYHLTPDAAFFLSRPMFVHQIETKYEDLK
KAIETPKGKQLQQKQILQCYVDAVNVVMDPVFQSARLLQAPKVWNSISPQLYVTFWALSM
FDLYVPSERYEQELNKLRQQLTQLEDNKDMPVSKKKKEKERCSLLAEKLKEELRQQEERS
QRVMASLKNERDTWLPAKATKSETITQFLQLCMFPRCVFTASDAVYCAKFVHMLHNLKTP
NFSTLLCFDRVFSDISYTVASCTENEASRYGRFLCSMLEIVMRWHGDKKTYEKECGSYPG
FVTVLRATNNDKADHLDYENYRHVCHKWQYKLTKALVVCLESKDYTQIRNTIMVLTKILP
YYPKVLNLGQALERRIDKICEEEKEKRQDIYVLALGYAGRLKAKKRDMVVESEFHHKEKP
PPAATPPASQNEAVTVKQEKTETQSNSSVTAEPTSKATKNTDPEVKPKATVSIKKEPDSS
KSSSPSMTKSDSAPSSQKETSGKSATGSSSGKPSGTSTPSSTSSSRTGQGDSPSRSNASN
TKSLTTGNNSSQPVSKASSSSIASSKTTKTSSTVKTESNTNGNDAVPTSKKTDSSKQKVK
DKEKEKEKDKEANEKPKEKVKAEKTEKVKEQKSKEKEKERSKSKEKEGKDKVKERTKDKD
RERSGVKSKHLSPAVPESPRDGEYEKDAKRRKIDGISSSSSQENSPSRLGESDSFKSPEN
AERKTKVVEYEKEKTSKADRKRSSLEPVEGKEAKRRKDDSDANVAVSKSSSSYGSENKTK
VKGEPKVKLVRKAAPDASPPAKKEKDKDKDKDKDKEREKDKEGKTATSKKKESRHLEVKD
SEAKEDERSKKHHSRSASRSRRT
NT seq 4932 nt   +upstreamnt  +downstreamnt
atggctgccatggtcgtcctatcaaatgccgtaaaaaactgggaaaaatctggcaaagat
gaagtgtttcggttgtgcaagaactgcgttcggagcaaggatggagagctgtccgattcc
cactttcagtgcggagaaaacgatctcaaacgtgtcatctatgaagtgttttgtcacgtc
attcaaggcaacctgaagcatgacgatgttgtgtccctgctgtctgatgtcgcggaagtc
cacccaggaagctcatctctgctagctgacctattctgtatcttggatgtggaaagtcaa
tgtgctgaggacaagccaagcagagaaagattcctgtctcttgttgcagcatcagtggga
gtagttccggaagctctgcttaaagaacgcctggatgtagaaacattggatacattagga
ctcattccatcacaaaaagccttcaatcaaaaatatgtcaggaccaagaccaagctattt
tataagcagcaaaagtttaatttagtgcgagaagagagtgagggttatgccaaactggta
actgaactgggtcaagagattagcagacatgttacaagctcaagggcactggaaaatatc
aagtcattgataggtcggttcaacttggaccccaacaagactttagatgttcttcttgac
tcatttgaatgtcgtatagaattagaagacttctttcttcctctgttgaagtctttcatg
gagaaatacgaatcgtctgctctttgccacattatgggattcaaatttcagttttataag
gatcagccagatttgcccactcctcactctcttttccatcttgctgcccttctcataaag
cacaaactgctgcaattggatgatctttatttgcatctgagcccttcagatactgacatt
gttgctagcaatgaaacgagaattgaagatgcaaagcaagaagcaagaaaaatgaatgtt
gctgtgctagctgaaatagctgctacaagcaatgatgaaaacagcaaggacaataataaa
gaaaatgataagccaaccattgttccagataatcagaaatttggcatttgtgaagcattg
ttagtggttggggcatgggatcatgcacagacaatactagaaagactgccacaatttgct
gctgtgtcacatcctgcaattgctagtggtttatgtaaacttattcatacaacagttgaa
ccgttgtatcggaggcattcttccaaggcagctcgtggacgtccctatgtcccagtggca
ggagggccacctcagtgcaaagcgtttacagatttgccgcatagtgtttttcccatgtta
ctgcaccttggtccacacctttcaacagatccaattctcatggctaaaatcctgagaatt
ggtaaaggcttcatgaaagatcatccaaatgtttttgaggataaagagcagagttctccg
cagattgagaaagtctggtgtggattgttaaccctgctagatgaagttctgctgccttca
atttcattactggaatgtaactccagtttagcagaagaactttggaccatgatgtgtcgc
tttccttatgaactcaggtatcgcctctatggtcagtggaaaaatgaatcttacttgagt
catccaagaatgttattagctaaagctgccacaattaagagagcaaaatacatcacaaag
agattgactaaagaaaatgtcaaaccttctggacgacaaattggaaaactaagccacagc
aatccaggcattctatttgaatatctgctttcacagattcaaaagtatgataacttcatt
ggacctgttgtggactcactgaagtaccttactcctctggcttatgatgttctagcttat
tgtatcatagaagctttggcaaatccagagagggagagactcaagcatgaagataccaac
atctcggaatggcttaaaagtttagcagtattttgtggcaccgtattccgcaagtattcc
attgagctgactggtcttctgcagtatgtagcaaatcagctcaaagctggaaagagcttt
gatttgcttgtgcttaaggaggttgtacagaaaatgtcaggaatcgagatatcagaagaa
gtgacagctgcacagttggaggctttgtcagggggagaattactcagagccgagggagga
tacttcggtcagattagaaacacaaagaagtcttctcagcgactccgcgacacactgttg
gaaggaaagttagatcttcctctttgtctcctgatggctcagcagaggaatggaattgtg
ttttttgaagattcggagcgacatctgaaacttgtgggaaaactatatgaccagtgtcaa
gatactttggtgcaatttggaggttttcttgccactcagttatcagctgaggagtacgag
tcacacctgccatcgctggatgtcttgggtcagtcgtatcatttaacgcctgatgctgca
tttttcctgtcaagacccatgtttgtccatcagatagagaccaagtatgaggatttgaag
aaggccatcgaaactcctaagggaaagcaacttcagcaaaaacaaattttgcagtgttat
gtcgatgctgtcaatgttgtaatggacccggtgtttcaaagcgcacggctcttacaagcg
ccgaaagtatggaatagcatcagccctcagctgtatgttactttctgggcgttatctatg
ttcgatctttacgtgccatctgagcgatacgaacaagagctaaacaaattgagacaacag
cttacgcaattagaagacaacaaagatatgccagtaagcaagaaaaagaaggagaaggaa
agatgctcgcttttggctgaaaagttgaaagaagaactcagacaacaagaggaacgtagc
cagagagtgatggcatccctgaaaaacgagagagacacttggctgccagctaaagcgaca
aagagtgagaccattacgcagtttcttcaactatgtatgttcccaagatgtgtgttcact
gccagtgatgctgtgtattgtgctaagtttgttcacatgctgcacaatcttaaaacgccg
aacttttcgacgctactttgctttgacagagtgttttcggatatttcatatactgtggcc
agttgtacggaaaatgaagccagtagatatggtcgctttttgtgttcaatgttggaaata
gttatgaggtggcatggcgataagaaaacttatgagaaggaatgcggtagctacccagga
tttgtgacagtcttgagagctacaaacaacgacaaggctgatcatttagattatgagaat
tatcgacatgtctgtcacaagtggcagtacaaactgacaaaggcccttgtagtctgttta
gaatccaaagattatacgcagattcgaaatacaatcatggttttaacaaagattttgcct
tattatcccaaagttttaaatcttggccaagctttggaaaggagaatcgacaagatttgt
gaagaagaaaaggagaagcgacaggatatttatgttctcgccttggggtatgctggtcgt
ttaaaggcgaaaaagcgagacatggttgtggaaagcgagtttcatcacaaagaaaagcct
cccccggcagctacaccgccagcgagccagaatgaggctgtgacagtgaagcaagagaaa
acggagacgcagtctaattcgtctgtgaccgctgagccgacaagtaaggcaacgaagaat
acggatcccgaagtgaaacccaaggccacagtgagtatcaagaaagagccagacagttcg
aaatcatcaagtcctagtatgaccaaaagcgacagtgcgccttcctctcagaaagagact
tctggtaaatctgccacgggatcctctagtggtaaaccatctggcacaagtacccccagc
agtacgtcttcctcccggacaggtcagggcgattcgccaagcaggagtaatgcctctaac
accaaatctttaacaacaggcaacaattccagtcaacccgtgtccaaagcttcctcttcc
tccattgccagctccaaaacaacaaaaacctcttccacagtcaaaacggaaagcaacact
aacggaaatgatgccgtacccacaagcaaaaagactgacagcagcaaacagaaggtgaag
gataaggagaaagaaaaggaaaaagacaaagaggcaaatgaaaaacccaaggagaaggtt
aaagcagaaaaaacagagaaggtcaaagaacagaaaagcaaagagaaagaaaaagagcga
agcaaaagcaaagaaaaagaaggcaaagacaaagtgaaggagcgcacgaaagataaagac
agggaacgatccggcgtgaaaagcaaacatttatcaccagcggttcctgaatctcctaga
gatggcgaatacgaaaaagatgctaagcgccgtaaaatcgacgggatctcgtcttcatcg
tctcaggagaattctccatctcggttaggcgaatctgactcattcaagagtccggaaaat
gcagagaggaaaacaaaagttgtggaatacgagaaagaaaagacctcaaaagcagatcga
aaaaggtcctcattagaaccagtcgaagggaaagaagcaaaaaggagaaaagatgatagt
gatgccaatgttgcagtctccaaatcgtccagctcatacggatccgaaaacaaaacgaag
gtgaaaggcgagcccaaagtaaagctcgtgcggaaagcagcaccggatgcctcgccacca
gcgaaaaaggagaaagacaaagacaaagacaaagacaaagacaaagaacgggaaaaagac
aaggaaggcaaaacagcgacaagcaaaaagaaagagtcgcgtcaccttgaagtcaaagat
tccgaagccaaggaggatgaacggtccaagaaacaccattccagatcagcatcaagaagt
cgcagaacataa

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