Montipora foliosa: 138000612
Help
Entry
138000612 CDS
T10576
Name
(RefSeq) gem-associated protein 5-like
KO
K13133
gem associated protein 5
Organism
mfoo Montipora foliosa
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
138000612
03041 Spliceosome [BR:
mfoo03041
]
138000612
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138000612
mRNA cycle factors
P-body specific factors
138000612
Spliceosome [BR:
mfoo03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
138000612
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_GEMI5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
DSE1_N
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_EML
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
PAC11
WD40_Gbeta
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_EIPR1
ASA1
Beta-prop_VPS8
GEMI5_RBS
WD40_MABP1-WDR62_1st
CFAP251_N
TPR_ELP1
Beta-prop_Nup120_160
TPR_IF140-IFT172
Motif
Other DBs
NCBI-GeneID:
138000612
NCBI-ProteinID:
XP_068703250
LinkDB
All DBs
Position
4:31505523..31540982
Genome browser
AA seq
1717 aa
AA seq
DB search
MAADASKFVLPASPNWYCSNVADCSLNNRYAFGARNCVYLLDVSLQTPSFEGQLTGHAER
VTSVCFSKHKLQANFIASGADDKTVKIWDTETKLTLLEHKAHSAKVTCVSWSPLVTDLVV
SGDEKGQVIAWRYEEGNVFGGCPVQDHIFSMALSYLSESELAIGYKSGLIVLLNISSDGA
LSIINKLQGHSNEVHSLAWCPTPKQHIDFGPLQDKATAANGHLIMSGSRDQTVRLWDTSQ
GKVLSIKQLPRRSAQKWKDKYDPHWTKDRLWLSVCWPVASAGHIITSSQGGELLLWDLSK
DGKEQYKAFGVGHSRIVFTITCDVAGTRMMTVSMDRQIVFWDPVHLQSIQILPTLGGFAY
SLSISPLDPGTLGVGVGDNMLRVWQTASSQGPYETLTLWQAIKSKVMVVKWHPSKEGLLA
FGADDGQVGIYNTISKRAEISATYHKKTVYSLSWGPPCPKTDEDAIIMHNLYSCAGDGRV
YQHKTGHFMEDPIDVCALIVKTNDIKHKPLGRTDVSWNLDGTVMALGNEDGSIEVFVPPD
LMQIGLIMTHKKSITTLVWHHGYSEVTTSDVGSCKYWLASGSNEFSIHVHDLSSVLGDLS
NPRPRAAPITDCFRQLSGHWGRITGLSWSPHQSELLLSSSYDGTAQVWDVPKGEPLFNFR
GHSSRVMCVVWSYLDPDLVYSGGEDGTVRPWRPSVQQHQQPPVQEKKMTHSSSKSSAKNK
RAKQKAKLKTESTNNEACVQEKKPDDDGNPGGNTKESKVANEKPTVAEIVTLVGNTDNAL
TSDKNGGVLKSENREAEITAPAEVRENVEKKSSTDAKSENTRGLGEVETLTNSVEVVNLT
KNEGINLANGPESEKKQEAIIPLRSRVTLEPSLSLSTTSKKKKKAKSMFPVSAVADNKSK
LAAQDECVQLAEILYGQDDSNSSPTASLRAEAGSDGLTNLGLFADRRAAYRLIATEGQHH
KENGNLDYRLQLEIWKGNLAGALEMATTSKQLTDWLVALSPLAGRNVWMATTRAFADQLE
SQGSYQRAVLYYLACHDTYKAIDVFRKQGMYREAIALAKVRLSPLDPVLFDLYSAWARKL
ETENSFEQAAKCYLAVKSSADAVRVLVRRGDQPSLKTAFQVSLLSGETELAISLSLRLTQ
SCLIALNWKDAQEILTSCPGVEAHLLNVCVHELLIVTLAEEQIITDDFFHDAARTKISSF
LQLTNLGTREPVQLGKYLHVDTPYESPWIANSKPGKWFIASIVQAWYDCGVFQPHSTLPL
FNTLKAHYETISFGTGTISESLSELSIEITLGLLGALIGDLYTACQYWLQALSSCSKKCL
FALQRQLCFMLLPNGLRSLNNLLSLSHELCGLTTSDRATTREMQEQLFRHFDAYYAKALI
TELWYRFPKAITVFHSDSDKSFGEDDNNCLCEPEYSLDNHKFSDSNELKSEQEVAAAIIF
ESDEHNEVMTCAEKELFSSRKSDSGRKEDLMSTLQKFSGLLLSDRHARLCNLRSLLTEIR
KAMLLMRSRQFVTGKSLSRKKKKSKIREQMVQPVGITANCSECELTNGTFSVNSAVKPTE
NGGEGHEEADGQGSGENEDRYTAEKSQEEASPSEIMTKGLVTHDGKLPIDLRFTAGGASL
DGLQDEETRVLKELKEYELKDLPFPSPLESALIIGNFCVCANGLPISAGDLQEIGMSVVS
WAQIHAQTLTDLKGVLRLKHVYGKIPAVNFNNIINEG
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagacgcgtcgaagttcgttcttccggcttctccaaactggtattgtagcaat
gtggctgactgcagtctaaacaatagatatgcatttggagccaggaactgtgtgtatttg
ttggacgtgagtctgcagactccctcttttgagggacaattgactggccatgccgaacga
gtcacaagcgtttgtttttcgaagcacaaacttcaagcaaattttattgcaagtggcgca
gatgacaaaacagtcaagatatgggataccgagacgaagctcacattgttggaacacaaa
gcgcatagtgcaaaggtcacttgtgtttcatggtctcctttggtgacagatctggttgtc
tcaggtgatgaaaaaggacaggttattgcatggagatatgaggaaggaaatgtttttggt
ggttgtcctgtgcaggatcacattttctctatggctttatcttatctatcagaaagtgaa
ctagccattgggtacaagagtggtctgattgttttgctgaatatttcaagtgatggggct
ttgtcaatcataaacaagctacaaggacattcaaatgaggtccacagtttagcctggtgt
ccaacaccaaaacaacacattgattttggtccattgcaggacaaagcaacagctgccaat
ggacatttaattatgtctgggagcagagatcagacagttaggttatgggacacttctcaa
ggcaaagtcttgtcaatcaaacagttgccaaggagatcagcacagaaatggaaagacaag
tatgatcctcactggaccaaggacagactgtggcttagtgtgtgttggcccgtggcatcg
gcaggacacatcattacaagcagtcaaggcggagagcttttgttatgggatctgagcaag
gatggaaaagaacaatacaaggcctttggtgttggccattcaagaattgtgttcactatt
acgtgtgatgttgcagggacaagaatgatgactgtgtctatggaccgacagattgtcttt
tgggatcctgtacatttgcaaagtatacagattctccccaccttagggggttttgcctac
tctctgtctatctcccccttggatcctggcactctgggggtgggagtaggggacaacatg
ctgcgtgtgtggcaaacagcttcgtctcaaggtccttatgaaacactgactctgtggcaa
gcaatcaaatcaaaagtgatggtggtcaagtggcatcccagtaaagaaggactgcttgct
tttggtgcagatgatggacaagtagggatatacaataccatctctaaaagggcagagatt
tctgcaacatatcacaagaaaacagtctattctctatcttggggcccaccatgccccaaa
acagatgaagatgcaattatcatgcacaatctctacagctgtgctggtgatgggcgtgtt
tatcaacacaaaactggacattttatggaagatccaatagatgtctgtgctttgattgtg
aagacaaatgatatcaagcacaagccattgggtcggacagatgtttcatggaacttagat
ggtactgtaatggcattgggtaacgaggatgggtcgattgaggtgtttgttccgccagac
ttgatgcagattggattgataatgacacacaagaaaagtatcaccacacttgtgtggcat
catgggtacagtgaggtcacgacttcagatgttggtagctgtaagtactggcttgcttca
ggatcgaacgaattcagtattcatgtccatgacctgagcagtgttctaggtgatttatcg
aatccaaggccccgcgcagcacccatcacggattgtttccgtcagttgtcagggcactgg
ggccgaattactggtttgagctggagtcctcatcagtctgagctgctcctgtcatcttct
tacgatggaaccgctcaggtgtgggatgtacccaaaggagagcctctgttcaattttcgc
gggcacagtagccgtgtaatgtgtgtggtgtggagttatcttgatcctgatttggtgtac
agtggtggagaggatggaaccgtgcgaccgtggagaccatccgtacaacaacatcaacag
cccccggtccaagaaaagaaaatgactcattcttcaagcaagtcttccgccaagaataaa
agggctaaacaaaaagctaaacttaagacggagtctactaacaacgaagcatgcgtgcaa
gaaaagaaacccgatgatgacggcaatccaggaggaaatacgaaggaatctaaggtcgct
aatgaaaagccaacggtagcagagatagttacactcgttggaaacacagacaatgctttg
acaagtgacaagaacggcggagtgctcaaatctgaaaatcgggaggcagaaattacagct
cctgcagaagtcagggagaatgttgaaaagaaaagtagcactgatgcaaaaagcgagaat
acacgaggcctaggagaagtagagactttgaccaacagtgttgaggtggtgaatttaaca
aaaaatgaaggaataaatcttgctaatggccccgagagtgagaaaaaacaggaagcaatc
attcctttgcgatcgagagtgacactagagccttctttgtcattatcgacgacttccaag
aagaagaagaaagccaagtctatgtttccagtttctgcggttgccgacaacaagtccaag
ttagcagctcaagatgaatgcgtacagctggcagagattctttatggtcaggatgatagc
aacagttctccgacagcgtccctccgtgccgaggcaggctcagacggacttactaacctt
gggttgttcgctgatcggcgtgcagcttacagactgatagccacagagggacagcatcac
aaggagaatggcaacctcgactaccgacttcagctggaaatctggaaaggaaacttggcc
ggtgcactggaaatggcaactaccagcaaacaactaaccgactggcttgtagctctgagt
ccacttgctggacgtaacgtttggatggcaacaacgcgagcatttgctgaccagttagaa
tcgcaaggatcttatcagcgtgcagtgctgtattacctggcctgtcacgacacatacaaa
gctattgacgtgtttaggaaacaggggatgtacagagaggccattgcattggccaaggtg
cgactctcaccgctagacccagtccttttcgatctttatagcgcatgggctaggaaacta
gagacggaaaattcatttgagcaagcagccaaatgttacttggcagttaagtcatcagcc
gacgctgtgcgagtcttggttcgccgaggggatcagccttcactcaagacagcatttcag
gtttctttgctcagtggtgagactgaactggccatttcattaagcctgcgccttacgcaa
tcctgtctaatcgctctaaactggaaagacgcgcaggaaattttgactagctgccctgga
gttgaggcgcaccttttaaatgtttgcgtgcatgaactgttgatcgtcacactggctgag
gaacaaatcatcaccgacgacttctttcacgacgctgcgcgaaccaagataagttcgttt
ctccaactgaccaaccttggtaccagggaaccggtgcaattggggaagtaccttcatgtg
gacacgccttacgaatcaccttggatagccaatagcaaacctggaaaatggttcattgca
tccattgtacaagcatggtatgactgtggcgtattccaaccgcattcaacgctcccattg
ttcaatacacttaaggcacattacgagactatctcctttggaacagggactatctccgag
agtttatccgaactctccattgagataactcttggactgctgggggcgcttattggtgat
ctctacaccgcttgccagtactggttgcaggctctgtccagttgcagcaaaaagtgtttg
ttcgccttgcaacgacagctttgcttcatgctgctgccaaatgggcttagatctctgaac
aacctgctgagcctaagccatgaattatgtggtttaaccacatccgatagggcaacgaca
agggaaatgcaagagcaactctttcgtcatttcgatgcttattatgccaaagcgctcatt
acagaattatggtatcggtttccaaaggcaattacagttttccatagtgactcggataaa
tccttcggagaagacgacaacaattgtctctgcgaacctgagtactctttagataaccac
aagttttccgactctaacgaacttaagagcgaacaggaagtcgcggcggcaattatcttc
gaaagtgatgaacataacgaagtcatgacctgtgctgagaaggaacttttctcgtccagg
aaaagtgacagtggtcgtaaagaggatttgatgtcgactttgcagaaattcagcggtctt
ttgctttcagatcgtcacgccagactttgtaatcttcgttcattgctcactgaaataaga
aaggcgatgttgttgatgagatctcggcaatttgtgacaggaaaatctttaagtcggaag
aaaaagaaaagtaaaattagagagcaaatggttcaaccagtgggcataactgcgaactgc
agtgaatgtgaacttacaaatgggacatttagcgtcaacagtgcagtgaaaccgacagag
aatggtggtgagggccacgaagaggcagatggacagggttcaggtgaaaatgaggacagg
tacacagctgaaaaatctcaggaagaagcctcacccagtgaaataatgacaaaaggtctg
gtgacgcatgacggaaagcttccaattgacttgaggttcaccgcaggtggtgcaagcttg
gatggtctgcaagatgaagaaacaagagtgctaaaggaactcaaggaatacgagttgaag
gaccttccgtttccttcacccttggagtcagctttgatcattgggaatttctgtgtatgt
gcaaatgggctccccatatctgcaggtgaccttcaagaaattggtatgagtgtcgtatcg
tgggctcaaattcatgcccagaccctcacagatctgaaaggagttttgagattaaagcat
gtctacggtaaaattcctgcggtgaacttcaataatatcataaatgaaggttga
DBGET
integrated database retrieval system