Montipora foliosa: 138000846
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Entry
138000846 CDS
T10576
Name
(RefSeq) nuclear RNA export factor 1-like isoform X1
KO
K14284
nuclear RNA export factor
Organism
mfoo Montipora foliosa
Pathway
mfoo03008
Ribosome biogenesis in eukaryotes
mfoo03013
Nucleocytoplasmic transport
mfoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138000846
03015 mRNA surveillance pathway
138000846
03008 Ribosome biogenesis in eukaryotes
138000846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
138000846
03009 Ribosome biogenesis [BR:
mfoo03009
]
138000846
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138000846
mRNA cycle factors
Stress granule specific factors
138000846
Ribosome biogenesis [BR:
mfoo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
138000846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
LRR_4
LRR_8
LRR_9
LRR_Zer-1
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
138000846
NCBI-ProteinID:
XP_068703612
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All DBs
Position
4:complement(44891500..44946586)
Genome browser
AA seq
666 aa
AA seq
DB search
MSKNLFAKAVQDATFPVTTSRDGSRSYGDREPDRSSRGRSHRGYSRGRMRRRGYGHYQPR
SSSPHPRSYLADDDDDDDISMDSGDGGVLRTDSRYNPYGSRPPSRRGARVGNNNRGDVKS
RLGTTPLNSHSSNQDWFKVVILQGQKHDKDWLLRKLQSACEEAFQAFNFHHMKGESAAFF
VEGSKASEALKKVNSKITVRDGSKLILTVRPCGPPHNPTRVFTRVEDGNSVSFREGNNTL
DDNTKEVLKQCLSKRYDVASKALNLSDLFHDEVLNANNVQGILSRPWLASWILQLIGENC
PEVQSLDISNNRLKYLDGFRELGQQASNLKHLKICNNQIRAVEELDKIKTLSQLTSLELD
GNPLCDMFQNKGNTYINSVRSKLPKITHLDGHELPPPIGFDLPSEQVLPPSKGSFLGDPQ
IKELVQKFLAQYFTIYDTEDRQGLLEAYHDQAIFSMCVNVGTISKDRSVPRGPSLGEYMK
NSRNLKQVTRADFRVSLQKHSRLSVVAFLNELPVTKHDLSSFTVDVSLALPTCLSFSVQG
LFMENSKIIRSFSRVFLAVPAAGGKALSIINDELHIRNASPSQVEKCASERKVPSTETVN
TTLLPAKCTPQQQEMLAQFSQQSTMNVEWSFKCLSENNWDYDKAALAFTSLKNNDSIPPE
AFIKTR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaatctgtttgccaaggccgttcaagatgcgacatttccagtgacaacatca
cgagatggatcaaggagttatggggatagagaaccagacaggtcaagcagaggaagatct
catcgtggttactccagaggtagaatgagaagaagaggttatggtcactatcaaccaaga
agtagctctcctcatccccggtcttacctagctgatgatgatgatgatgatgatattagc
atggattcaggggatggaggtgtccttagaacagattcaagatacaacccttatggatca
aggcccccttctcgtcgtggtgcaagagtaggaaacaacaacagaggcgatgtcaagtcc
agattaggaacaactcctctcaacagtcacagcagtaatcaggactggttcaaagttgtg
attttgcagggacagaaacatgacaaagattggttacttaggaaactacaaagtgcatgt
gaggaagcatttcaggcttttaattttcatcacatgaaaggagaaagtgcagcatttttt
gttgaagggagcaaagcttcagaagctctgaaaaaagtcaacagtaaaattacagtaagg
gatggctccaagctcatattgactgttcggccgtgtggtccacctcataatcctaccaga
gtattcactagagttgaagatggcaacagtgtcagtttcagagaaggcaacaatactcta
gatgataacactaaagaagtcttaaagcaatgcctgagtaaacgttatgatgtagcatca
aaggcccttaatctctctgacctctttcatgatgaagtgctgaatgccaataatgtacaa
ggaatattgtcaagaccttggttagcttcatggattttgcaacttattggtgaaaactgc
cctgaggttcagtcactggatataagtaacaatagactaaagtacttagatggcttcagg
gaacttggacaacaagcatcgaacctaaaacacctcaaaatttgtaacaatcagattagg
gctgtggaagaacttgacaagataaaaacgctgagtcagcttacctccctggagcttgat
gggaatccactttgtgacatgttccaaaacaaaggaaatacttacatcaactctgtaaga
agcaagctgccaaaaattacccatttggatggtcatgaacttcctccacccattggcttt
gatcttccatctgaacaagtgttaccaccatcaaagggcagtttccttggtgaccctcaa
attaaagagttggtacagaaattccttgcgcagtattttacgatctatgacacggaagac
aggcagggtttgctagaagcttatcacgaccaggcaatattctctatgtgcgtgaatgtt
ggaacaatcagcaaggaccgtagtgtaccacggggtccttctctcggcgagtacatgaaa
aacagcagaaacttgaaacaagtcaccagagcagattttcgcgttagtctccagaagcac
tcaagactctctgtagttgcctttctgaatgaactgccggtcaccaaacatgatttgtct
agttttacagttgatgtgagccttgctttgcccacttgtctgtcattctctgtccaggga
ttgttcatggaaaattctaaaatcattcgatccttttcaagagtgttcctcgctgttcct
gctgcaggtggaaaagcgttgagtatcataaatgatgagcttcatattcgcaatgcatca
ccatctcaagttgagaaatgtgcaagtgaacgaaaagtgcccagcacagagacagtcaat
acaacactgctcccagccaagtgcacacctcagcaacaagaaatgctcgcgcagttttcg
caacaatcgacaatgaatgttgagtggtcattcaaatgtcttagtgaaaataattgggac
tacgacaaagctgctctcgcttttacttcattaaagaacaatgacagtataccccctgaa
gcttttatcaaaacaaggtag
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