Montipora foliosa: 138006135
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Entry
138006135 CDS
T10576
Name
(RefSeq) uncharacterized protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mfoo Montipora foliosa
Pathway
mfoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138006135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
138006135
03400 DNA repair and recombination proteins [BR:
mfoo03400
]
138006135
Enzymes [BR:
mfoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
138006135
Messenger RNA biogenesis [BR:
mfoo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
138006135
DNA repair and recombination proteins [BR:
mfoo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
138006135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-GeneID:
138006135
NCBI-ProteinID:
XP_068708396
LinkDB
All DBs
Position
6:complement(62075063..62077869)
Genome browser
AA seq
634 aa
AA seq
DB search
MADLEEAFNRVASKFGIQALNSHQQLAISKLIERKNDIFVNLPTGSGKSLIFQALPLVID
HVSSQPGHICVVVSPLLTLVDDQVEYLRGKGVTAASISSCTEEEATVIEKGKISVVFGSP
EAWIQNERWRSMLGNSVYSKKLCALAIDEAHVIRQWGTSQSNKMAAFRHCYGKLYELRSL
APNTPMVALTATATKLTEDTIKKVLLMQNPLDIKESPNKVNLTYSVIKMNKDCDLELFFE
WLVEDIRKLKDKCDRTIIYCQTIKQCGIIYGMLRGLLRKDLFIEKTSTGEKLPLVEMLHS
CTPATNKKNILSSFQHEDGIIRVLVATIAFGMGVNCKAVHRIIHYGPSKNIEAFVQETGR
AGRDGHQSNSFLLYHGMLLNHVEGDIKLFIKSTDCRRKAILEHFNNDNERPLLKHLCCDN
CANNCDCGLPECKTSLQYPVSVDAKSSSSSSRKRDIQPLQREHVKKCLIKYHKSLLVDFV
GMAANANLKTLTNIQFMLGFGDLQISQVLHNLEHIFEMSDVYRTVEIWHKRHAQEIIRVI
GETFHDTNVNSNDAYAVDDDDDDDNNVVFSEDLLDEWSDILLDDELFEMVMDNISLSQMD
TSSYLANQPNDSCDVDIVDDDNDLFTALAGTYGV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctcgaagaagcgttcaatcgtgtagcgtcaaaattcgggatacaggcttta
aattcgcatcagcaactagcaatatcgaagttaattgaaaggaaaaatgatattttcgtt
aatttgcctactggctccggaaaatctctgatttttcaagctttgccgttagtcatcgac
cacgtatcaagtcagccaggccacatttgtgttgttgtgtcgcctttgctcactctagtg
gatgatcaagtggagtatttgagaggcaagggagttacagcggcgagcattagctcttgc
actgaagaggaggcgactgtgatagaaaagggaaagatttctgttgtctttggctcccca
gaagcttggatccaaaacgaacggtggagatcaatgcttggaaattctgtgtattccaaa
aaattatgtgctttggccatcgacgaagcccacgtaataaggcagtgggggacatcccaa
agcaataagatggctgcgtttcgtcattgctatggaaagctgtatgagttgcggtccctt
gctccaaatacgccaatggttgcattaactgcaacagcaacaaagctcactgaagacacc
atcaaaaaagttctcctaatgcagaatccattggacattaaagaaagtccaaacaaggta
aatcttacctattcagttataaagatgaacaaagattgtgacctcgaattattctttgag
tggcttgtagaagacatcaggaaattaaaagataagtgtgacaggaccatcatctactgt
cagaccataaaacagtgtgggattatctatggaatgctaagaggactattaaggaaagac
ttgttcattgagaagacaagcactggtgaaaaattgcccttagtagagatgttgcattca
tgcacccctgccacaaacaagaaaaacattttgagctccttccaacatgaggatgggatc
ataagggtcttagttgcaactatagcatttggcatgggagtcaattgcaaagctgttcac
aggatcatccattatgggccatcaaagaatattgaagcctttgttcaagaaactggaagg
gctgggcgtgatggccatcagagtaactcatttttgttgtatcatggcatgcttttgaat
catgtggagggagacatcaagttgtttattaaatcaactgattgtcgaagaaaagcaatt
ctggaacacttcaacaatgataatgagaggcctctattgaaacatctctgctgtgataat
tgcgccaataactgtgactgtggtttgccagaatgcaaaacttcacttcaatatcctgtg
tctgtagatgcaaagagtagcagcagttcaagcaggaaaagagatattcaaccactacag
agggaacatgtaaaaaaatgcctgataaagtatcacaagtcactcttagttgattttgta
ggcatggctgcaaatgcaaatctcaagacattgaccaacattcaattcatgctaggattt
ggagatcttcaaatttcacaggttcttcataacctggagcacatatttgaaatgtctgat
gtttacagaacagtggaaatctggcataaaaggcatgcacaagagattattcgggtaatt
ggtgaaacttttcatgacacaaatgtcaacagcaatgatgcttatgctgttgatgatgat
gacgatgatgacaataatgttgtttttagtgaggatctacttgacgaatggagtgatatt
ttacttgatgatgaactatttgaaatggtcatggacaacatttcactttcccagatggat
acaagttcttaccttgccaatcaacccaatgattcatgtgatgtagatattgttgatgat
gacaatgatttgtttacagctttggcaggaacatatggtgtgtaa
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